Initializing AMReX (25.10-33-ga3892dee9444)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.10-33-ga3892dee9444) initialized Starting run at 05:22:14 UTC on 2025-10-28. Successfully read inputs file ... Castro git describe: 25.10-7-ged95a91be AMReX git describe: 25.10-33-ga3892dee9 Microphysics git describe: 25.10-10-ge711ad68 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014311843 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.33869955 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.351524022 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.314939898 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.316644115 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.363031143 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.307142851 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.295380315 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.29699634 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.296922566 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.296489108 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007731033 seconds Ending run at 05:22:18 UTC on 2025-10-28. Run time = 3.365817299 Run time without initialization = 3.190486547 Average number of zones advanced per microsecond: 0.822 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.3652 ... 3.3655 ... 3.3658 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1517 2.2218 2.2793 67.72% Gravity::make_radial_gravity() 21 0.2838 0.2905 0.3041 9.04% check_for_negative_density() 10 0.04019 0.1071 0.1822 5.41% Castro::initData() 1 0.03779 0.0722 0.1119 3.32% Castro::estTimeStep() 21 0.0308 0.06781 0.1047 3.11% FabArray::ParallelCopy_finish() 41 0.04495 0.05916 0.09547 2.84% amrex::Copy() 193 0.06326 0.07869 0.08979 2.67% FabArray::setVal() 143 0.05415 0.06538 0.07022 2.09% Castro::reset_internal_energy(Fab) 1008 0.04315 0.04564 0.04722 1.40% Castro::normalize_species() 62 0.0448 0.04548 0.04609 1.37% FabArray::ParallelCopy_nowait() 41 0.03581 0.04106 0.04394 1.31% FillPatchIterator::Initialize 41 0.02798 0.03279 0.03892 1.16% StateData::FillBoundary(geom) 41 0.02845 0.03097 0.03319 0.99% Gravity::interpolate_monopole_grav() 21 0.02656 0.02672 0.02702 0.80% Castro::construct_new_gravity_source() 10 0.02343 0.02496 0.02698 0.80% FabArray::Saxpy() 20 0.01027 0.01331 0.01905 0.57% Castro::computeTemp() 63 0.01735 0.01808 0.01842 0.55% Castro::initialize_do_advance() 10 0.01168 0.01607 0.01737 0.52% Castro::initialize_advance() 10 0.005259 0.01066 0.01338 0.40% VisMF::Write(FabArray) 2 0.008704 0.009628 0.01219 0.36% Amr::writePlotFile() 2 0.00714 0.01 0.01218 0.36% MultiFab::contains_nan() 20 0.01062 0.01135 0.0121 0.36% FabArray::setDomainBndry() 41 0.006761 0.009804 0.01203 0.36% Castro::construct_old_gravity_source() 10 0.00712 0.009425 0.009923 0.29% Castro::initMFs() 1 0.006515 0.006939 0.007994 0.24% Castro::enforce_min_density() 62 0.005542 0.006057 0.006472 0.19% Castro::construct_new_source() 50 0.005518 0.005918 0.006268 0.19% main() 1 0.003627 0.004087 0.004513 0.13% Gravity::get_new_grav_vector() 11 0.002889 0.003449 0.003825 0.11% Gravity::get_old_grav_vector() 10 0.001635 0.002009 0.002395 0.07% Amr::coarseTimeStep() 10 0.0007741 0.001411 0.002047 0.06% Castro::finalize_do_advance() 10 0.0005162 0.001126 0.001251 0.04% AmrLevel::FillPatch() 41 0.0007559 0.001007 0.00113 0.03% Amr::timeStep() 10 0.0001429 0.00019 0.000437 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002698 0.0002816 0.0003024 0.01% Castro::do_advance_ctu() 10 0.0001523 0.0001885 0.000243 0.01% Castro::clean_state() 62 0.0001347 0.0001636 0.0002024 0.01% StateDataPhysBCFunct::() 41 0.0001078 0.0001349 0.0001836 0.01% FillPatchIterator::FillFromLevel0() 41 8.664e-05 0.0001024 0.0001182 0.00% FabArray::ParallelCopy() 41 9.13e-05 9.928e-05 0.00011 0.00% Castro::do_old_sources() 10 8.876e-05 9.54e-05 0.0001067 0.00% Castro::Castro() 1 4.493e-05 7.669e-05 9.668e-05 0.00% Amr::FinalizeInit() 1 3.345e-06 1.621e-05 8.991e-05 0.00% Castro::apply_source_to_state() 20 3.453e-05 5.402e-05 8.243e-05 0.00% Castro::construct_old_source() 50 5.362e-05 7.028e-05 8.226e-05 0.00% FillPatchSingleLevel 41 6.144e-05 6.572e-05 6.994e-05 0.00% Castro::do_new_sources() 10 5.489e-05 6.029e-05 6.478e-05 0.00% Castro::advance() 10 4.019e-05 4.606e-05 6.061e-05 0.00% Castro::construct_new_gravity() 10 3.201e-05 3.948e-05 5.424e-05 0.00% Castro::subcycle_advance_ctu() 10 4.614e-05 5.005e-05 5.341e-05 0.00% Amr::defBaseLevel() 1 2.866e-05 3.964e-05 4.838e-05 0.00% Castro::construct_old_gravity() 10 3.299e-05 3.963e-05 4.733e-05 0.00% Castro::expand_state() 10 2.059e-05 2.451e-05 3.632e-05 0.00% Castro::check_for_nan() 20 2.599e-05 2.825e-05 3.422e-05 0.00% Castro::post_timestep() 10 1.635e-05 1.858e-05 2.69e-05 0.00% Castro::post_init() 1 1.476e-05 1.623e-05 1.817e-05 0.00% Castro::computeNewDt() 9 8.194e-06 8.645e-06 9.761e-06 0.00% Amr::InitializeInit() 1 2.798e-06 4.27e-06 9.263e-06 0.00% Castro::computeInitialDt() 2 2.742e-06 3.633e-06 4.569e-06 0.00% Amr::initialInit() 1 1.407e-06 2.038e-06 2.637e-06 0.00% Amr::init() 1 1.628e-06 2.191e-06 2.624e-06 0.00% Other 203 0.01035 0.01292 0.015 0.45% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.365 3.365 3.366 100.00% Amr::coarseTimeStep() 10 3.178 3.178 3.178 94.43% Amr::timeStep() 10 3.167 3.167 3.168 94.12% Castro::advance() 10 3.151 3.151 3.152 93.64% Castro::subcycle_advance_ctu() 10 3.077 3.08 3.094 91.93% Castro::do_advance_ctu() 10 3.076 3.08 3.094 91.92% Castro::construct_ctu_hydro_source() 10 2.34 2.35 2.357 70.03% Gravity::make_radial_gravity() 21 0.2999 0.3062 0.3172 9.43% AmrLevel::FillPatch() 41 0.1931 0.2073 0.2193 6.51% Gravity::get_new_grav_vector() 11 0.2043 0.2052 0.2061 6.12% FillPatchIterator::Initialize 41 0.1593 0.1743 0.195 5.79% Castro::construct_old_gravity() 10 0.1755 0.1809 0.1898 5.64% Gravity::get_old_grav_vector() 10 0.1748 0.1803 0.1892 5.62% Castro::construct_new_gravity() 10 0.1821 0.1827 0.184 5.47% check_for_negative_density() 10 0.04019 0.1071 0.1822 5.41% Amr::init() 1 0.1742 0.175 0.1753 5.21% Castro::initialize_do_advance() 10 0.1565 0.1616 0.1667 4.95% Amr::initialInit() 1 0.1595 0.1606 0.161 4.78% FillPatchIterator::FillFromLevel0() 41 0.1207 0.1317 0.1602 4.76% FillPatchSingleLevel 41 0.1206 0.1316 0.1601 4.76% Amr::InitializeInit() 1 0.05938 0.09389 0.1336 3.97% Amr::defBaseLevel() 1 0.05938 0.09388 0.1336 3.97% FabArray::ParallelCopy() 41 0.0891 0.1004 0.1315 3.91% Castro::expand_state() 10 0.1026 0.1089 0.119 3.53% Castro::clean_state() 62 0.1113 0.1149 0.1168 3.47% Castro::initData() 1 0.0416 0.07606 0.1152 3.42% Castro::do_old_sources() 10 0.1036 0.1077 0.1135 3.37% Castro::estTimeStep() 21 0.0308 0.06781 0.1047 3.11% Amr::FinalizeInit() 1 0.02585 0.06667 0.1014 3.01% FabArray::ParallelCopy_finish() 41 0.04495 0.05916 0.09547 2.84% amrex::Copy() 193 0.06326 0.07869 0.08979 2.67% Castro::computeInitialDt() 2 0.002167 0.04251 0.07729 2.30% Castro::initialize_advance() 10 0.05335 0.06809 0.07156 2.13% FabArray::setVal() 143 0.05415 0.06538 0.07022 2.09% Castro::do_new_sources() 10 0.05986 0.06334 0.06798 2.02% Castro::computeTemp() 63 0.06077 0.064 0.06589 1.96% Castro::reset_internal_energy(MultiFab) 63 0.04342 0.04592 0.04749 1.41% Castro::reset_internal_energy(Fab) 1008 0.04315 0.04564 0.04722 1.40% Castro::normalize_species() 62 0.0448 0.04548 0.04609 1.37% FabArray::ParallelCopy_nowait() 41 0.03595 0.04116 0.04405 1.31% StateDataPhysBCFunct::() 41 0.02857 0.0311 0.03338 0.99% StateData::FillBoundary(geom) 41 0.02845 0.03097 0.03319 0.99% Castro::construct_new_source() 50 0.02907 0.03088 0.03302 0.98% Gravity::interpolate_monopole_grav() 21 0.02656 0.02672 0.02702 0.80% Castro::construct_new_gravity_source() 10 0.02343 0.02496 0.02698 0.80% Castro::post_init() 1 0.02349 0.02376 0.02393 0.71% Amr::writePlotFile() 2 0.02217 0.02229 0.02276 0.68% Castro::finalize_do_advance() 10 0.01266 0.01799 0.02258 0.67% Castro::apply_source_to_state() 20 0.01031 0.01336 0.01913 0.57% FabArray::Saxpy() 20 0.01027 0.01331 0.01905 0.57% Castro::post_timestep() 10 0.01491 0.01573 0.01648 0.49% VisMF::Write(FabArray) 2 0.008704 0.009628 0.01219 0.36% Castro::check_for_nan() 20 0.01065 0.01138 0.01213 0.36% MultiFab::contains_nan() 20 0.01062 0.01135 0.0121 0.36% FabArray::setDomainBndry() 41 0.006761 0.009804 0.01203 0.36% Castro::Castro() 1 0.01032 0.01107 0.012 0.36% Castro::construct_old_source() 50 0.007173 0.009496 0.01 0.30% Castro::construct_old_gravity_source() 10 0.00712 0.009425 0.009923 0.29% Castro::computeNewDt() 9 0.008429 0.008444 0.008458 0.25% Castro::initMFs() 1 0.006515 0.006939 0.007994 0.24% Castro::enforce_min_density() 62 0.005542 0.006057 0.006472 0.19% Other 203 0.02041 0.02451 0.0278 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 30 B 41 B 57 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8659 KiB 8669 KiB 8672 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6759 KiB 6764 KiB 6769 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7134 KiB 7140 KiB 7142 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4567 KiB 4571 KiB 4595 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 215 KiB 229 KiB 246 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2806 KiB 2808 KiB 2809 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 227 KiB 231 KiB 240 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 40 KiB 44 KiB 60 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2030 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 77 KiB 78 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 66 KiB 68 KiB 72 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.10-33-ga3892dee9444) finalized