Initializing AMReX (25.10-37-gab576e18a4d0)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.10-37-gab576e18a4d0) initialized Starting run at 05:18:00 UTC on 2025-10-30. Successfully read inputs file ... Castro git describe: 25.10-7-ged95a91be AMReX git describe: 25.10-37-gab576e18a Microphysics git describe: 25.10-11-g1a162ea4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014593434 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.349552839 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.332365274 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.33387275 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.320435899 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.38050807 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.305602873 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.295838653 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.296705577 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.29641257 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.296694107 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007755692 seconds Ending run at 05:18:03 UTC on 2025-10-30. Run time = 3.386651591 Run time without initialization = 3.221098836 Average number of zones advanced per microsecond: 0.814 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.3857 ... 3.3862 ... 3.3867 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1810 2.2277 2.2911 67.65% Gravity::make_radial_gravity() 21 0.2931 0.3044 0.3229 9.53% check_for_negative_density() 10 0.0362 0.1042 0.1464 4.32% FabArray::ParallelCopy_finish() 41 0.04545 0.06139 0.113 3.34% Castro::initData() 1 0.03719 0.07111 0.1022 3.02% Castro::estTimeStep() 21 0.02017 0.0584 0.09518 2.81% amrex::Copy() 193 0.06851 0.08221 0.09017 2.66% FabArray::setVal() 143 0.05166 0.06664 0.07343 2.17% Castro::reset_internal_energy(Fab) 1008 0.04437 0.04675 0.05245 1.55% FabArray::ParallelCopy_nowait() 41 0.03611 0.0426 0.04869 1.44% Castro::normalize_species() 62 0.04458 0.04571 0.04729 1.40% FillPatchIterator::Initialize 41 0.02736 0.03435 0.03877 1.14% StateData::FillBoundary(geom) 41 0.02865 0.03242 0.03853 1.14% Gravity::interpolate_monopole_grav() 21 0.02622 0.02649 0.02734 0.81% Castro::construct_new_gravity_source() 10 0.02289 0.02437 0.02638 0.78% Castro::computeTemp() 63 0.0177 0.01844 0.02022 0.60% Castro::initialize_do_advance() 10 0.0114 0.01651 0.01768 0.52% Castro::construct_old_gravity_source() 10 0.00685 0.009973 0.01511 0.45% FabArray::Saxpy() 20 0.01079 0.01248 0.01431 0.42% Castro::initialize_advance() 10 0.005361 0.01064 0.01389 0.41% VisMF::Write(FabArray) 2 0.009312 0.009867 0.01309 0.39% MultiFab::contains_nan() 20 0.01065 0.01137 0.01291 0.38% FabArray::setDomainBndry() 41 0.006991 0.01033 0.01211 0.36% Amr::writePlotFile() 2 0.00733 0.009732 0.01013 0.30% Castro::initMFs() 1 0.006657 0.007123 0.008992 0.27% Castro::construct_new_source() 50 0.005582 0.005902 0.00614 0.18% main() 1 0.003933 0.004316 0.00466 0.14% Gravity::get_new_grav_vector() 11 0.002763 0.00357 0.003903 0.12% Gravity::get_old_grav_vector() 10 0.001569 0.002109 0.002655 0.08% Amr::coarseTimeStep() 10 0.0008633 0.001671 0.002186 0.06% AmrLevel::FillPatch() 41 0.0007638 0.001166 0.001313 0.04% Castro::finalize_do_advance() 10 0.0006683 0.001146 0.001311 0.04% Amr::timeStep() 10 0.0001343 0.0001882 0.0004022 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000267 0.00029 0.000342 0.01% Castro::do_advance_ctu() 10 0.0001517 0.000197 0.0002539 0.01% Castro::clean_state() 62 0.0001372 0.0001621 0.0001934 0.01% StateDataPhysBCFunct::() 41 0.0001128 0.0001332 0.0001607 0.00% Castro::construct_old_source() 50 5.129e-05 7.533e-05 0.0001348 0.00% Castro::do_old_sources() 10 7.281e-05 9.861e-05 0.0001254 0.00% FabArray::ParallelCopy() 41 9.673e-05 0.0001006 0.0001211 0.00% FillPatchIterator::FillFromLevel0() 41 9.482e-05 0.000109 0.0001169 0.00% Castro::Castro() 1 4.626e-05 7.802e-05 0.0001072 0.00% FillPatchSingleLevel 41 6.522e-05 7.035e-05 7.781e-05 0.00% Castro::do_new_sources() 10 5.299e-05 5.928e-05 6.744e-05 0.00% Amr::FinalizeInit() 1 3.156e-06 1.249e-05 6.712e-05 0.00% Castro::construct_old_gravity() 10 3.169e-05 4.015e-05 6.107e-05 0.00% Castro::subcycle_advance_ctu() 10 3.988e-05 4.901e-05 5.619e-05 0.00% Castro::apply_source_to_state() 20 4.086e-05 4.884e-05 5.489e-05 0.00% Castro::advance() 10 3.867e-05 4.309e-05 4.817e-05 0.00% Castro::construct_new_gravity() 10 3.309e-05 3.709e-05 4.69e-05 0.00% Amr::defBaseLevel() 1 2.941e-05 3.347e-05 4.066e-05 0.00% Castro::expand_state() 10 2.177e-05 2.589e-05 3.509e-05 0.00% Castro::check_for_nan() 20 2.397e-05 2.723e-05 3.064e-05 0.00% Castro::post_init() 1 1.506e-05 1.765e-05 2.152e-05 0.00% Castro::post_timestep() 10 1.506e-05 1.704e-05 1.954e-05 0.00% Castro::computeNewDt() 9 8.486e-06 9.171e-06 1e-05 0.00% Amr::init() 1 1.997e-06 3.74e-06 9.927e-06 0.00% Amr::initialInit() 1 1.791e-06 3.048e-06 9.312e-06 0.00% Amr::InitializeInit() 1 2.909e-06 3.634e-06 6.473e-06 0.00% Castro::computeInitialDt() 2 2.897e-06 3.744e-06 4.443e-06 0.00% Other 265 0.01521 0.01914 0.02099 0.62% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.386 3.386 3.387 100.00% Amr::coarseTimeStep() 10 3.209 3.209 3.209 94.75% Amr::timeStep() 10 3.197 3.198 3.198 94.44% Castro::advance() 10 3.181 3.182 3.182 93.96% Castro::subcycle_advance_ctu() 10 3.105 3.11 3.125 92.29% Castro::do_advance_ctu() 10 3.105 3.11 3.125 92.29% Castro::construct_ctu_hydro_source() 10 2.348 2.353 2.357 69.60% Gravity::make_radial_gravity() 21 0.3094 0.3206 0.3361 9.92% AmrLevel::FillPatch() 41 0.1868 0.2152 0.2417 7.14% FillPatchIterator::Initialize 41 0.1573 0.1816 0.2131 6.29% Gravity::get_new_grav_vector() 11 0.2092 0.2101 0.2111 6.23% Castro::construct_old_gravity() 10 0.1858 0.1923 0.2059 6.08% Gravity::get_old_grav_vector() 10 0.1851 0.1917 0.2053 6.06% Castro::construct_new_gravity() 10 0.1869 0.1878 0.1884 5.56% FillPatchIterator::FillFromLevel0() 41 0.118 0.1369 0.1787 5.28% FillPatchSingleLevel 41 0.1179 0.1368 0.1786 5.27% Castro::initialize_do_advance() 10 0.1563 0.1666 0.1704 5.03% Amr::init() 1 0.164 0.165 0.1652 4.88% Amr::initialInit() 1 0.1492 0.1507 0.1509 4.46% FabArray::ParallelCopy() 41 0.08902 0.1042 0.1493 4.41% check_for_negative_density() 10 0.0362 0.1042 0.1464 4.32% Amr::InitializeInit() 1 0.05943 0.09323 0.1246 3.68% Amr::defBaseLevel() 1 0.05943 0.09323 0.1246 3.68% Castro::clean_state() 62 0.1122 0.1165 0.1244 3.67% Castro::expand_state() 10 0.1016 0.1129 0.1214 3.59% Castro::do_old_sources() 10 0.1008 0.1119 0.1212 3.58% FabArray::ParallelCopy_finish() 41 0.04545 0.06139 0.113 3.34% Castro::initData() 1 0.04064 0.0749 0.106 3.13% Castro::estTimeStep() 21 0.02017 0.0584 0.09518 2.81% Amr::FinalizeInit() 1 0.02628 0.05742 0.09148 2.70% amrex::Copy() 193 0.06851 0.08221 0.09017 2.66% Castro::initialize_advance() 10 0.05238 0.06792 0.07345 2.17% FabArray::setVal() 143 0.05166 0.06664 0.07343 2.17% Castro::computeTemp() 63 0.06242 0.06548 0.07301 2.16% Castro::do_new_sources() 10 0.05954 0.06306 0.069 2.04% Castro::computeInitialDt() 2 0.002066 0.03331 0.06727 1.99% Castro::reset_internal_energy(MultiFab) 63 0.04464 0.04704 0.05279 1.56% Castro::reset_internal_energy(Fab) 1008 0.04437 0.04675 0.05245 1.55% FabArray::ParallelCopy_nowait() 41 0.03624 0.04271 0.04881 1.44% Castro::normalize_species() 62 0.04458 0.04571 0.04729 1.40% StateDataPhysBCFunct::() 41 0.02879 0.03255 0.03869 1.14% StateData::FillBoundary(geom) 41 0.02865 0.03242 0.03853 1.14% Castro::construct_new_source() 50 0.02887 0.03027 0.03243 0.96% Gravity::interpolate_monopole_grav() 21 0.02622 0.02649 0.02734 0.81% Castro::construct_new_gravity_source() 10 0.02289 0.02437 0.02638 0.78% Castro::post_init() 1 0.02317 0.02358 0.02375 0.70% Amr::writePlotFile() 2 0.02214 0.02224 0.02261 0.67% Castro::finalize_do_advance() 10 0.01092 0.01787 0.02205 0.65% Castro::post_timestep() 10 0.01531 0.01573 0.01637 0.48% Castro::construct_old_source() 50 0.006902 0.01005 0.01524 0.45% Castro::construct_old_gravity_source() 10 0.00685 0.009973 0.01511 0.45% Castro::apply_source_to_state() 20 0.01083 0.01252 0.01436 0.42% FabArray::Saxpy() 20 0.01079 0.01248 0.01431 0.42% VisMF::Write(FabArray) 2 0.009312 0.009867 0.01309 0.39% Castro::check_for_nan() 20 0.01067 0.01139 0.01293 0.38% MultiFab::contains_nan() 20 0.01065 0.01137 0.01291 0.38% Castro::Castro() 1 0.01058 0.01132 0.01236 0.36% FabArray::setDomainBndry() 41 0.006991 0.01033 0.01211 0.36% Castro::initMFs() 1 0.006657 0.007123 0.008992 0.27% Castro::computeNewDt() 9 0.008362 0.008384 0.0084 0.25% Other 265 0.02557 0.03097 0.03368 0.99% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 37 B 41 B 56 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8658 KiB 8668 KiB 8670 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6785 KiB 6787 KiB 6788 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7133 KiB 7139 KiB 7141 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4581 KiB 4588 KiB 4608 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 206 KiB 236 KiB 265 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 16 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2815 KiB 2818 KiB 2818 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 232 KiB 241 KiB 253 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 39 KiB 45 KiB 66 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2029 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 79 KiB 79 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 70 KiB 72 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.10-37-gab576e18a4d0) finalized