Initializing AMReX (25.11-47-gc4fcda1fb2ea)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.11-47-gc4fcda1fb2ea) initialized Starting run at 06:17:11 UTC on 2025-11-27. Successfully read inputs file ... Castro git describe: 25.11-8-g389379f86 AMReX git describe: 25.11-47-gc4fcda1fb Microphysics git describe: 25.11-12-gfbb310ae reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015268203 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.342807311 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.331851893 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.331399847 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.323367794 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.374913334 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.310633992 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.303595289 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.301343673 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.302090266 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.301341465 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007640059 seconds Ending run at 06:17:15 UTC on 2025-11-27. Run time = 3.42341589 Run time without initialization = 3.236266136 Average number of zones advanced per microsecond: 0.810 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.4225 ... 3.4231 ... 3.4234 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2130 2.2624 2.3077 67.41% Gravity::make_radial_gravity() 21 0.2921 0.3019 0.3162 9.24% check_for_negative_density() 10 0.04047 0.08943 0.143 4.18% Castro::estTimeStep() 21 0.03023 0.08519 0.1203 3.51% Castro::initData() 1 0.03402 0.07053 0.1199 3.50% FabArray::ParallelCopy_finish() 41 0.04219 0.06345 0.1115 3.26% amrex::Copy() 193 0.06258 0.07996 0.09192 2.69% FabArray::setVal() 143 0.05166 0.06626 0.07392 2.16% Castro::reset_internal_energy(Fab) 1008 0.04585 0.04709 0.04941 1.44% Castro::normalize_species() 62 0.04414 0.04551 0.04678 1.37% FabArray::ParallelCopy_nowait() 41 0.03445 0.04002 0.04164 1.22% FillPatchIterator::Initialize 41 0.02746 0.03276 0.03628 1.06% StateData::FillBoundary(geom) 41 0.02675 0.0311 0.03482 1.02% Gravity::interpolate_monopole_grav() 21 0.02651 0.02742 0.02899 0.85% Castro::construct_new_gravity_source() 10 0.02209 0.02379 0.02548 0.74% Castro::computeTemp() 63 0.01769 0.01824 0.01882 0.55% Castro::initialize_do_advance() 10 0.01172 0.01613 0.01743 0.51% VisMF::Write(FabArray) 2 0.009211 0.009922 0.01374 0.40% FabArray::setDomainBndry() 41 0.007598 0.01201 0.01363 0.40% Castro::initialize_advance() 10 0.005298 0.01059 0.01337 0.39% FabArray::Saxpy() 20 0.01045 0.01182 0.01291 0.38% MultiFab::contains_nan() 20 0.009435 0.01042 0.0115 0.34% Amr::writePlotFile() 2 0.007438 0.01053 0.01121 0.33% Castro::construct_old_gravity_source() 10 0.006522 0.008832 0.009425 0.28% Castro::initMFs() 1 0.006559 0.007032 0.008169 0.24% Castro::construct_new_source() 50 0.00553 0.005968 0.006204 0.18% main() 1 0.003662 0.004088 0.004588 0.13% Gravity::get_new_grav_vector() 11 0.002684 0.003465 0.003719 0.11% Amr::coarseTimeStep() 10 0.002264 0.002832 0.003489 0.10% Gravity::get_old_grav_vector() 10 0.001477 0.001951 0.00223 0.07% Castro::finalize_do_advance() 10 0.0005603 0.001009 0.001236 0.04% AmrLevel::FillPatch() 41 0.0007478 0.000939 0.001026 0.03% Amr::timeStep() 10 0.0001314 0.0001772 0.0004018 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002627 0.0002753 0.0002912 0.01% Castro::do_advance_ctu() 10 0.0001578 0.0001814 0.000222 0.01% Castro::clean_state() 62 0.0001326 0.0001528 0.000163 0.00% StateDataPhysBCFunct::() 41 0.0001017 0.0001213 0.0001591 0.00% FillPatchIterator::FillFromLevel0() 41 9.785e-05 0.0001079 0.0001201 0.00% Castro::do_old_sources() 10 7.372e-05 8.467e-05 9.815e-05 0.00% FabArray::ParallelCopy() 41 7.946e-05 8.823e-05 9.471e-05 0.00% Castro::Castro() 1 5.231e-05 7.473e-05 9.43e-05 0.00% FillPatchSingleLevel 41 6.582e-05 7.034e-05 7.871e-05 0.00% Castro::construct_old_source() 50 5.155e-05 6.191e-05 7.573e-05 0.00% Castro::advance() 10 3.946e-05 4.743e-05 6.881e-05 0.00% Castro::do_new_sources() 10 4.953e-05 5.948e-05 6.838e-05 0.00% Amr::FinalizeInit() 1 3.508e-06 1.154e-05 6.405e-05 0.00% Castro::subcycle_advance_ctu() 10 4.7e-05 5.105e-05 5.723e-05 0.00% Castro::apply_source_to_state() 20 4.338e-05 4.898e-05 5.331e-05 0.00% Amr::defBaseLevel() 1 3.712e-05 4.288e-05 4.999e-05 0.00% Castro::construct_new_gravity() 10 2.864e-05 3.417e-05 4.347e-05 0.00% Castro::construct_old_gravity() 10 3.062e-05 3.507e-05 4.095e-05 0.00% Castro::expand_state() 10 2.101e-05 2.41e-05 3.009e-05 0.00% Castro::check_for_nan() 20 2.285e-05 2.545e-05 2.899e-05 0.00% Castro::post_init() 1 1.387e-05 1.592e-05 1.82e-05 0.00% Castro::post_timestep() 10 1.413e-05 1.548e-05 1.794e-05 0.00% Castro::computeNewDt() 9 8.081e-06 1.024e-05 1.312e-05 0.00% Amr::InitializeInit() 1 2.606e-06 3.84e-06 9.992e-06 0.00% Castro::computeInitialDt() 2 5.599e-06 6.524e-06 7.99e-06 0.00% Amr::initialInit() 1 1.277e-06 3.024e-06 5.891e-06 0.00% Amr::init() 1 1.928e-06 3.503e-06 5.186e-06 0.00% Other 265 0.01498 0.01872 0.02103 0.61% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.423 3.423 3.423 100.00% Amr::coarseTimeStep() 10 3.224 3.224 3.224 94.18% Amr::timeStep() 10 3.209 3.21 3.21 93.78% Castro::advance() 10 3.193 3.194 3.194 93.29% Castro::subcycle_advance_ctu() 10 3.118 3.122 3.139 91.69% Castro::do_advance_ctu() 10 3.118 3.122 3.139 91.68% Castro::construct_ctu_hydro_source() 10 2.37 2.373 2.376 69.42% Gravity::make_radial_gravity() 21 0.3078 0.3176 0.3294 9.62% AmrLevel::FillPatch() 41 0.1918 0.2106 0.2323 6.79% Gravity::get_new_grav_vector() 11 0.2061 0.2071 0.2083 6.08% FillPatchIterator::Initialize 41 0.1618 0.1798 0.2082 6.08% Castro::construct_old_gravity() 10 0.1914 0.1969 0.2052 5.99% Gravity::get_old_grav_vector() 10 0.1908 0.1963 0.2046 5.98% Amr::init() 1 0.1863 0.1869 0.1874 5.47% Castro::construct_new_gravity() 10 0.1819 0.1824 0.1833 5.35% FillPatchIterator::FillFromLevel0() 41 0.1191 0.135 0.1732 5.06% FillPatchSingleLevel 41 0.119 0.1349 0.1731 5.06% Amr::initialInit() 1 0.1709 0.1716 0.1723 5.03% Castro::initialize_do_advance() 10 0.1559 0.1634 0.17 4.97% FabArray::ParallelCopy() 41 0.08401 0.1037 0.1461 4.27% check_for_negative_density() 10 0.04047 0.08943 0.143 4.18% Amr::InitializeInit() 1 0.05543 0.09203 0.1423 4.16% Amr::defBaseLevel() 1 0.05543 0.09203 0.1423 4.16% Castro::initData() 1 0.03802 0.07442 0.1239 3.62% Castro::expand_state() 10 0.1014 0.1104 0.1225 3.58% Castro::estTimeStep() 21 0.03023 0.08519 0.1203 3.51% Castro::clean_state() 62 0.1137 0.1163 0.1193 3.49% Amr::FinalizeInit() 1 0.02923 0.07959 0.1165 3.40% FabArray::ParallelCopy_finish() 41 0.04219 0.06345 0.1115 3.26% Castro::do_old_sources() 10 0.09207 0.1027 0.1083 3.16% amrex::Copy() 193 0.06258 0.07996 0.09192 2.69% Castro::computeInitialDt() 2 0.002658 0.05332 0.09036 2.64% FabArray::setVal() 143 0.05166 0.06626 0.07392 2.16% Castro::initialize_advance() 10 0.05089 0.06793 0.07259 2.12% Castro::computeTemp() 63 0.06386 0.0656 0.06841 2.00% Castro::do_new_sources() 10 0.05853 0.06229 0.06621 1.93% Castro::reset_internal_energy(MultiFab) 63 0.04613 0.04736 0.0497 1.45% Castro::reset_internal_energy(Fab) 1008 0.04585 0.04709 0.04941 1.44% Castro::normalize_species() 62 0.04414 0.04551 0.04678 1.37% FabArray::ParallelCopy_nowait() 41 0.03456 0.04011 0.04173 1.22% StateDataPhysBCFunct::() 41 0.02686 0.03122 0.03494 1.02% StateData::FillBoundary(geom) 41 0.02675 0.0311 0.03482 1.02% Castro::construct_new_source() 50 0.02794 0.02976 0.03151 0.92% Gravity::interpolate_monopole_grav() 21 0.02651 0.02742 0.02899 0.85% Castro::finalize_do_advance() 10 0.01801 0.02272 0.02681 0.78% Castro::post_init() 1 0.02576 0.02593 0.02617 0.76% Castro::construct_new_gravity_source() 10 0.02209 0.02379 0.02548 0.74% Amr::writePlotFile() 2 0.02272 0.02302 0.02319 0.68% Castro::post_timestep() 10 0.01553 0.01611 0.0169 0.49% VisMF::Write(FabArray) 2 0.009211 0.009922 0.01374 0.40% FabArray::setDomainBndry() 41 0.007598 0.01201 0.01363 0.40% Castro::apply_source_to_state() 20 0.0105 0.01187 0.01296 0.38% FabArray::Saxpy() 20 0.01045 0.01182 0.01291 0.38% Castro::Castro() 1 0.01027 0.01099 0.01199 0.35% Castro::check_for_nan() 20 0.009458 0.01044 0.01153 0.34% MultiFab::contains_nan() 20 0.009435 0.01042 0.0115 0.34% Castro::computeNewDt() 9 0.01013 0.01018 0.0102 0.30% Castro::construct_old_source() 50 0.006574 0.008894 0.0095 0.28% Castro::construct_old_gravity_source() 10 0.006522 0.008832 0.009425 0.28% Castro::initMFs() 1 0.006559 0.007032 0.008169 0.24% Other 265 0.02508 0.03019 0.03378 0.99% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Pinned Memory Usage: --------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 8 30 B 35 B 48 B 8192 KiB 8192 KiB 8192 KiB --------------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: --------------------------------------------------------------------------------------------------------------------------- Name Nalloc Nfree AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max --------------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 48 8660 KiB 8669 KiB 8672 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 32 6742 KiB 6745 KiB 6746 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 32 7132 KiB 7140 KiB 7142 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 80 4550 KiB 4556 KiB 4577 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 328 206 KiB 226 KiB 253 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 16 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 80 2795 KiB 2798 KiB 2798 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 168 229 KiB 236 KiB 245 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 656 36 KiB 44 KiB 64 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 32 2027 KiB 2029 KiB 2030 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 88 77 KiB 77 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 80 71 KiB 73 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB --------------------------------------------------------------------------------------------------------------------------- AMReX (25.11-47-gc4fcda1fb2ea) finalized