Initializing AMReX (25.12-11-gc23d2e158829)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-11-gc23d2e158829) initialized Starting run at 06:22:36 UTC on 2025-12-10. Successfully read inputs file ... Castro git describe: 25.12 AMReX git describe: 25.12-11-gc23d2e158 Microphysics git describe: 25.12-3-g469bc34c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014083597 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.336450015 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.346436171 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.316862318 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.319059909 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.360162193 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.309370333 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.298219838 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.298122769 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.298790926 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.298666229 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00802111 seconds Ending run at 06:22:40 UTC on 2025-12-10. Run time = 3.365161798 Run time without initialization = 3.195140345 Average number of zones advanced per microsecond: 0.820 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.3631 ... 3.3641 ... 3.3653 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2176 2.2728 2.3144 68.77% Gravity::make_radial_gravity() 21 0.277 0.284 0.2993 8.89% check_for_negative_density() 10 0.03635 0.08284 0.1404 4.17% Castro::estTimeStep() 21 0.0336 0.06763 0.1098 3.26% Castro::initData() 1 0.03447 0.07017 0.1068 3.17% amrex::Copy() 193 0.06242 0.07743 0.08759 2.60% FabArray::ParallelCopy_finish() 41 0.03843 0.04738 0.08179 2.43% FabArray::setVal() 143 0.05444 0.0652 0.07132 2.12% Castro::reset_internal_energy(Fab) 1008 0.04393 0.04622 0.0478 1.42% Castro::normalize_species() 62 0.04404 0.0449 0.04584 1.36% FabArray::ParallelCopy_nowait() 41 0.03485 0.04001 0.04151 1.23% StateData::FillBoundary(geom) 41 0.02776 0.03073 0.03478 1.03% FillPatchIterator::Initialize 41 0.0275 0.03186 0.03434 1.02% Castro::construct_new_gravity_source() 10 0.0221 0.02397 0.02638 0.78% Gravity::interpolate_monopole_grav() 21 0.02559 0.02589 0.0261 0.78% Castro::computeTemp() 63 0.01699 0.01794 0.01848 0.55% Castro::initialize_do_advance() 10 0.0119 0.01623 0.01738 0.52% FabArray::Saxpy() 20 0.01066 0.01235 0.01354 0.40% Castro::initialize_advance() 10 0.005258 0.01058 0.01322 0.39% Amr::writePlotFile() 2 0.00753 0.01021 0.01224 0.36% VisMF::Write(FabArray) 2 0.008609 0.009418 0.01181 0.35% MultiFab::contains_nan() 20 0.009338 0.01012 0.01156 0.34% FabArray::setDomainBndry() 41 0.007595 0.009716 0.01078 0.32% Castro::construct_old_gravity_source() 10 0.006883 0.00945 0.0101 0.30% Castro::initMFs() 1 0.00652 0.007274 0.008161 0.24% Castro::construct_new_source() 50 0.005532 0.005988 0.006431 0.19% Castro::enforce_min_density() 62 0.005629 0.005993 0.006422 0.19% main() 1 0.003439 0.004282 0.004562 0.14% Gravity::get_new_grav_vector() 11 0.002806 0.003409 0.003737 0.11% Amr::coarseTimeStep() 10 0.001038 0.001579 0.0025 0.07% Gravity::get_old_grav_vector() 10 0.00152 0.00206 0.002456 0.07% Castro::finalize_do_advance() 10 0.0005886 0.00115 0.001272 0.04% AmrLevel::FillPatch() 41 0.0008522 0.0009865 0.001064 0.03% Amr::timeStep() 10 0.0001281 0.0001822 0.0004448 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002453 0.0002669 0.0002836 0.01% Castro::do_advance_ctu() 10 0.0001548 0.0001749 0.0001896 0.01% Castro::clean_state() 62 0.0001296 0.0001556 0.0001857 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001017 0.0001146 0.0001363 0.00% StateDataPhysBCFunct::() 41 9.394e-05 0.0001084 0.0001252 0.00% Castro::do_old_sources() 10 6.935e-05 8.883e-05 0.0001039 0.00% FabArray::ParallelCopy() 41 8.993e-05 9.479e-05 0.0001023 0.00% Amr::FinalizeInit() 1 3.452e-06 1.474e-05 8.999e-05 0.00% Castro::Castro() 1 5.885e-05 7.153e-05 8.229e-05 0.00% FillPatchSingleLevel 41 6.746e-05 7.568e-05 8.208e-05 0.00% Castro::construct_old_source() 50 5.172e-05 6.567e-05 7.708e-05 0.00% Castro::do_new_sources() 10 5.539e-05 6.099e-05 7.597e-05 0.00% Castro::subcycle_advance_ctu() 10 4.397e-05 4.829e-05 5.507e-05 0.00% Castro::apply_source_to_state() 20 4.289e-05 4.968e-05 5.483e-05 0.00% Castro::construct_old_gravity() 10 3.183e-05 3.719e-05 4.761e-05 0.00% Amr::defBaseLevel() 1 3.675e-05 4.109e-05 4.746e-05 0.00% Castro::advance() 10 3.717e-05 4.208e-05 4.59e-05 0.00% Castro::construct_new_gravity() 10 3.015e-05 3.64e-05 4.458e-05 0.00% Castro::post_init() 1 1.497e-05 1.883e-05 3.144e-05 0.00% Castro::check_for_nan() 20 2.361e-05 2.667e-05 3.122e-05 0.00% Castro::expand_state() 10 2.289e-05 2.52e-05 2.878e-05 0.00% Castro::post_timestep() 10 1.234e-05 1.524e-05 1.818e-05 0.00% Castro::computeNewDt() 9 7.946e-06 9.15e-06 1.027e-05 0.00% Amr::InitializeInit() 1 5.967e-06 6.338e-06 7.733e-06 0.00% Castro::computeInitialDt() 2 5.212e-06 6.257e-06 7.618e-06 0.00% Amr::init() 1 1.893e-06 2.345e-06 3.252e-06 0.00% Amr::initialInit() 1 1.389e-06 1.858e-06 2.623e-06 0.00% Other 203 0.01016 0.01255 0.01491 0.44% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.363 3.364 3.365 100.00% Amr::coarseTimeStep() 10 3.183 3.183 3.183 94.57% Amr::timeStep() 10 3.17 3.171 3.171 94.22% Castro::advance() 10 3.154 3.155 3.155 93.75% Castro::subcycle_advance_ctu() 10 3.08 3.084 3.098 92.06% Castro::do_advance_ctu() 10 3.08 3.084 3.098 92.06% Castro::construct_ctu_hydro_source() 10 2.371 2.376 2.382 70.77% Gravity::make_radial_gravity() 21 0.2931 0.3 0.3125 9.29% Gravity::get_new_grav_vector() 11 0.2 0.2019 0.204 6.06% AmrLevel::FillPatch() 41 0.18 0.1919 0.2038 6.06% Castro::construct_old_gravity() 10 0.1711 0.1773 0.1877 5.58% Gravity::get_old_grav_vector() 10 0.1705 0.1767 0.1871 5.56% Castro::construct_new_gravity() 10 0.1787 0.1802 0.1828 5.43% FillPatchIterator::Initialize 41 0.1486 0.1602 0.18 5.35% Amr::init() 1 0.1684 0.1688 0.1697 5.04% Castro::initialize_do_advance() 10 0.1542 0.1592 0.163 4.84% Amr::initialInit() 1 0.1537 0.1547 0.1556 4.62% FillPatchIterator::FillFromLevel0() 41 0.1109 0.1186 0.1449 4.31% FillPatchSingleLevel 41 0.1108 0.1185 0.1448 4.30% check_for_negative_density() 10 0.03635 0.08284 0.1404 4.17% Amr::InitializeInit() 1 0.05495 0.09132 0.1285 3.82% Amr::defBaseLevel() 1 0.05494 0.09131 0.1285 3.82% Castro::clean_state() 62 0.1107 0.1146 0.117 3.48% FabArray::ParallelCopy() 41 0.07981 0.08758 0.1168 3.47% Castro::expand_state() 10 0.1005 0.1067 0.116 3.45% Castro::initData() 1 0.03799 0.07393 0.1104 3.28% Castro::estTimeStep() 21 0.0336 0.06763 0.1098 3.26% Amr::FinalizeInit() 1 0.02519 0.06334 0.1004 2.98% Castro::do_old_sources() 10 0.08925 0.09261 0.09621 2.86% amrex::Copy() 193 0.06242 0.07743 0.08759 2.60% FabArray::ParallelCopy_finish() 41 0.03843 0.04738 0.08179 2.43% Castro::computeInitialDt() 2 0.002237 0.03995 0.07704 2.29% Castro::initialize_advance() 10 0.05256 0.06752 0.07143 2.12% FabArray::setVal() 143 0.05444 0.0652 0.07132 2.12% Castro::do_new_sources() 10 0.05937 0.06309 0.06992 2.08% Castro::computeTemp() 63 0.0612 0.06442 0.06655 1.98% Castro::reset_internal_energy(MultiFab) 63 0.04421 0.04648 0.04808 1.43% Castro::reset_internal_energy(Fab) 1008 0.04393 0.04622 0.0478 1.42% Castro::normalize_species() 62 0.04404 0.0449 0.04584 1.36% FabArray::ParallelCopy_nowait() 41 0.03495 0.04011 0.04159 1.24% StateDataPhysBCFunct::() 41 0.02785 0.03084 0.0349 1.04% StateData::FillBoundary(geom) 41 0.02776 0.03073 0.03478 1.03% Castro::construct_new_source() 50 0.02816 0.02996 0.03267 0.97% Castro::construct_new_gravity_source() 10 0.0221 0.02397 0.02638 0.78% Gravity::interpolate_monopole_grav() 21 0.02559 0.02589 0.0261 0.78% Castro::finalize_do_advance() 10 0.01262 0.01947 0.0243 0.72% Castro::post_init() 1 0.02268 0.02297 0.02313 0.69% Amr::writePlotFile() 2 0.02217 0.0223 0.02275 0.68% Castro::post_timestep() 10 0.01487 0.01583 0.01622 0.48% Castro::apply_source_to_state() 20 0.0107 0.0124 0.0136 0.40% FabArray::Saxpy() 20 0.01066 0.01235 0.01354 0.40% Castro::Castro() 1 0.009844 0.01096 0.012 0.36% VisMF::Write(FabArray) 2 0.008609 0.009418 0.01181 0.35% Castro::check_for_nan() 20 0.009365 0.01015 0.01159 0.34% MultiFab::contains_nan() 20 0.009338 0.01012 0.01156 0.34% FabArray::setDomainBndry() 41 0.007595 0.009716 0.01078 0.32% Castro::construct_old_source() 50 0.006934 0.009516 0.01018 0.30% Castro::construct_old_gravity_source() 10 0.006883 0.00945 0.0101 0.30% Castro::computeNewDt() 9 0.009182 0.009384 0.009595 0.29% Castro::initMFs() 1 0.00652 0.007274 0.008161 0.24% Castro::enforce_min_density() 62 0.005629 0.005993 0.006422 0.19% Other 203 0.01998 0.02378 0.0278 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8643 KiB 8651 KiB 8654 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6756 KiB 6763 KiB 6767 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7117 KiB 7125 KiB 7127 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4564 KiB 4569 KiB 4592 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 201 KiB 214 KiB 230 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2803 KiB 2806 KiB 2807 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 221 KiB 226 KiB 236 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 40 KiB 54 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2025 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 76 KiB 76 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 64 KiB 67 KiB 71 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-11-gc23d2e158829) finalized