Initializing AMReX (25.12-15-g4fc753db6b0b)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-15-g4fc753db6b0b) initialized Starting run at 00:38:40 UTC on 2025-12-13. Successfully read inputs file ... Castro git describe: 25.12-3-g4b4589371 AMReX git describe: 25.12-15-g4fc753db6 Microphysics git describe: 25.12-6-g18b6ec58 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014378625 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.340623099 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.326276525 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.330897225 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.313048774 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.355486581 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.305987815 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.29459656 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.29796421 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.299289394 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.297542209 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007639353 seconds Ending run at 00:38:43 UTC on 2025-12-13. Run time = 3.357539119 Run time without initialization = 3.174666591 Average number of zones advanced per microsecond: 0.826 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.3527 ... 3.3559 ... 3.3576 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2029 2.2459 2.3065 68.69% Gravity::make_radial_gravity() 21 0.281 0.2888 0.3033 9.03% check_for_negative_density() 10 0.02671 0.09101 0.133 3.96% Castro::estTimeStep() 21 0.02403 0.07524 0.1145 3.41% Castro::initData() 1 0.03464 0.07019 0.1111 3.31% amrex::Copy() 193 0.06345 0.07897 0.08674 2.58% FabArray::ParallelCopy_finish() 41 0.03622 0.04831 0.08419 2.51% FabArray::setVal() 143 0.0536 0.06476 0.0699 2.08% Castro::reset_internal_energy(Fab) 1008 0.04443 0.04657 0.04857 1.45% FabArray::ParallelCopy_nowait() 41 0.03466 0.03996 0.04199 1.25% Castro::normalize_species() 62 0.03539 0.03592 0.03645 1.09% FillPatchIterator::Initialize 41 0.02761 0.03208 0.03443 1.03% StateData::FillBoundary(geom) 41 0.02825 0.03061 0.03337 0.99% Gravity::interpolate_monopole_grav() 21 0.0257 0.02622 0.02786 0.83% Castro::construct_new_gravity_source() 10 0.02284 0.02393 0.02565 0.76% Castro::computeTemp() 63 0.0173 0.01808 0.01845 0.55% Castro::initialize_do_advance() 10 0.01167 0.01599 0.01746 0.52% Castro::initialize_advance() 10 0.005352 0.0107 0.01341 0.40% FabArray::Saxpy() 20 0.01045 0.0125 0.01323 0.39% VisMF::Write(FabArray) 2 0.008949 0.009656 0.01209 0.36% Amr::writePlotFile() 2 0.007241 0.0101 0.01199 0.36% FabArray::setDomainBndry() 41 0.007415 0.009832 0.01125 0.33% MultiFab::contains_nan() 20 0.009225 0.01001 0.01073 0.32% Castro::initMFs() 1 0.006436 0.007561 0.01039 0.31% Castro::construct_old_gravity_source() 10 0.006875 0.009548 0.01028 0.31% StateData::define() 4 0.005383 0.006347 0.00859 0.26% Castro::construct_new_source() 50 0.005495 0.00604 0.006333 0.19% main() 1 0.003903 0.004237 0.004695 0.14% Gravity::get_new_grav_vector() 11 0.002925 0.003514 0.00392 0.12% Gravity::get_old_grav_vector() 10 0.001692 0.0021 0.002778 0.08% Amr::coarseTimeStep() 10 0.001139 0.001999 0.002568 0.08% Castro::finalize_do_advance() 10 0.0005807 0.001128 0.00142 0.04% AmrLevel::FillPatch() 41 0.0008126 0.001023 0.001155 0.03% Amr::timeStep() 10 0.0001437 0.0002049 0.0005057 0.02% Castro::reset_internal_energy(MultiFab) 63 0.0002585 0.0002801 0.0002997 0.01% Castro::do_advance_ctu() 10 0.0001484 0.000168 0.0001977 0.01% Castro::clean_state() 62 0.0001408 0.0001559 0.0001674 0.00% FillPatchIterator::FillFromLevel0() 41 9.911e-05 0.0001109 0.000134 0.00% StateDataPhysBCFunct::() 41 9.245e-05 0.0001125 0.0001271 0.00% FabArray::ParallelCopy() 41 8.242e-05 8.989e-05 0.0001086 0.00% Castro::do_old_sources() 10 7.292e-05 8.81e-05 0.0001015 0.00% FillPatchSingleLevel 41 6.594e-05 7.55e-05 8.636e-05 0.00% Castro::Castro() 1 4.665e-05 7.18e-05 8.183e-05 0.00% Castro::construct_old_source() 50 5.312e-05 6.51e-05 7.914e-05 0.00% Amr::FinalizeInit() 1 3.994e-06 1.382e-05 7.431e-05 0.00% Castro::subcycle_advance_ctu() 10 4.425e-05 5.366e-05 6.728e-05 0.00% Castro::do_new_sources() 10 5.032e-05 5.943e-05 6.723e-05 0.00% Castro::apply_source_to_state() 20 4.661e-05 5.612e-05 6.159e-05 0.00% Amr::defBaseLevel() 1 3.375e-05 4.142e-05 5.582e-05 0.00% Castro::advance() 10 3.747e-05 4.41e-05 5.302e-05 0.00% Castro::construct_old_gravity() 10 3.069e-05 3.855e-05 4.622e-05 0.00% Castro::construct_new_gravity() 10 2.874e-05 3.196e-05 3.896e-05 0.00% Castro::check_for_nan() 20 2.094e-05 2.452e-05 3.018e-05 0.00% Castro::expand_state() 10 2.197e-05 2.541e-05 2.854e-05 0.00% Castro::post_init() 1 1.366e-05 1.652e-05 2.298e-05 0.00% AmrLevel::AmrLevel(dm) 1 9.035e-06 1.294e-05 2.023e-05 0.00% Castro::post_timestep() 10 1.406e-05 1.708e-05 1.987e-05 0.00% Castro::computeNewDt() 9 8.661e-06 1.012e-05 1.331e-05 0.00% Amr::InitializeInit() 1 4.98e-06 6.966e-06 1.047e-05 0.00% Amr::init() 1 1.766e-06 2.808e-06 7.318e-06 0.00% Castro::computeInitialDt() 2 5.587e-06 6.268e-06 7.024e-06 0.00% Amr::initialInit() 1 1.611e-06 1.836e-06 2.354e-06 0.00% Other 260 0.01039 0.01519 0.01814 0.54% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.353 3.356 3.358 100.00% Amr::coarseTimeStep() 10 3.162 3.162 3.162 94.19% Amr::timeStep() 10 3.149 3.149 3.15 93.82% Castro::advance() 10 3.134 3.134 3.135 93.37% Castro::subcycle_advance_ctu() 10 3.06 3.065 3.079 91.69% Castro::do_advance_ctu() 10 3.06 3.065 3.079 91.69% Castro::construct_ctu_hydro_source() 10 2.353 2.356 2.36 70.30% Gravity::make_radial_gravity() 21 0.2974 0.3052 0.3167 9.43% AmrLevel::FillPatch() 41 0.1818 0.1938 0.2072 6.17% Gravity::get_new_grav_vector() 11 0.2042 0.2053 0.2065 6.15% Castro::construct_old_gravity() 10 0.1753 0.1811 0.191 5.69% Gravity::get_old_grav_vector() 10 0.1745 0.1804 0.1904 5.67% Castro::construct_new_gravity() 10 0.1827 0.1832 0.1839 5.48% FillPatchIterator::Initialize 41 0.1497 0.1613 0.1826 5.44% Amr::init() 1 0.1783 0.1813 0.1826 5.44% Amr::initialInit() 1 0.1638 0.1667 0.168 5.00% Castro::initialize_do_advance() 10 0.1545 0.1575 0.1615 4.81% FillPatchIterator::FillFromLevel0() 41 0.1105 0.1194 0.1476 4.40% FillPatchSingleLevel 41 0.1104 0.1192 0.1475 4.39% Amr::InitializeInit() 1 0.05816 0.09463 0.1377 4.10% Amr::defBaseLevel() 1 0.05816 0.09462 0.1377 4.10% check_for_negative_density() 10 0.02671 0.09101 0.133 3.96% FabArray::ParallelCopy() 41 0.07773 0.08845 0.119 3.55% Castro::expand_state() 10 0.1033 0.1076 0.116 3.45% Castro::initData() 1 0.03796 0.07381 0.1146 3.41% Castro::estTimeStep() 21 0.02403 0.07524 0.1145 3.41% Amr::FinalizeInit() 1 0.02602 0.07203 0.1087 3.24% Castro::clean_state() 62 0.1041 0.1061 0.108 3.22% Castro::do_old_sources() 10 0.0876 0.09159 0.09405 2.80% amrex::Copy() 193 0.06345 0.07897 0.08674 2.58% Castro::computeInitialDt() 2 0.002313 0.04839 0.0849 2.53% FabArray::ParallelCopy_finish() 41 0.03622 0.04831 0.08419 2.51% Castro::initialize_advance() 10 0.05195 0.06625 0.07075 2.11% FabArray::setVal() 143 0.0536 0.06476 0.0699 2.08% Castro::computeTemp() 63 0.06202 0.06492 0.0673 2.00% Castro::do_new_sources() 10 0.05743 0.06173 0.06656 1.98% Castro::reset_internal_energy(MultiFab) 63 0.04471 0.04685 0.04885 1.45% Castro::reset_internal_energy(Fab) 1008 0.04443 0.04657 0.04857 1.45% FabArray::ParallelCopy_nowait() 41 0.03477 0.04005 0.04208 1.25% Castro::normalize_species() 62 0.03539 0.03592 0.03645 1.09% StateDataPhysBCFunct::() 41 0.02836 0.03072 0.03346 1.00% StateData::FillBoundary(geom) 41 0.02825 0.03061 0.03337 0.99% Castro::construct_new_source() 50 0.02834 0.02997 0.03199 0.95% Gravity::interpolate_monopole_grav() 21 0.0257 0.02622 0.02786 0.83% Castro::construct_new_gravity_source() 10 0.02284 0.02393 0.02565 0.76% Castro::post_init() 1 0.02281 0.0233 0.02343 0.70% Amr::writePlotFile() 2 0.02225 0.02237 0.0228 0.68% Castro::finalize_do_advance() 10 0.01277 0.01794 0.02183 0.65% Castro::post_timestep() 10 0.01377 0.01459 0.01559 0.46% Castro::Castro() 1 0.01014 0.01143 0.01448 0.43% Castro::apply_source_to_state() 20 0.0105 0.01256 0.01329 0.40% FabArray::Saxpy() 20 0.01045 0.0125 0.01323 0.39% VisMF::Write(FabArray) 2 0.008949 0.009656 0.01209 0.36% FabArray::setDomainBndry() 41 0.007415 0.009832 0.01125 0.33% Castro::check_for_nan() 20 0.009251 0.01004 0.01076 0.32% MultiFab::contains_nan() 20 0.009225 0.01001 0.01073 0.32% Castro::initMFs() 1 0.006436 0.007561 0.01039 0.31% Castro::construct_old_source() 50 0.006928 0.009613 0.01036 0.31% Castro::construct_old_gravity_source() 10 0.006875 0.009548 0.01028 0.31% Castro::computeNewDt() 9 0.01003 0.01006 0.01008 0.30% AmrLevel::AmrLevel(dm) 1 0.005393 0.00636 0.00861 0.26% StateData::define() 4 0.005383 0.006347 0.00859 0.26% Other 260 0.01496 0.02289 0.02739 0.82% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 13 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8632 KiB 8641 KiB 8646 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6727 KiB 6734 KiB 6738 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7110 KiB 7119 KiB 7121 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4547 KiB 4552 KiB 4574 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 204 KiB 216 KiB 233 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2791 KiB 2795 KiB 2796 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 225 KiB 231 KiB 240 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 35 KiB 40 KiB 55 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2023 KiB 2024 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 78 KiB 78 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 66 KiB 68 KiB 72 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-15-g4fc753db6b0b) finalized