Initializing AMReX (25.12-14-gbb5b55299976)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-14-gbb5b55299976) initialized Starting run at 06:21:24 UTC on 2025-12-12. Successfully read inputs file ... Castro git describe: 25.12 AMReX git describe: 25.12-14-gbb5b55299 Microphysics git describe: 25.12-5-gf8cf33ae reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014509292 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.344535344 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.347407186 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.317224987 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.318242159 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.375905269 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.307987415 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.299325697 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.298485323 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.299588817 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.300101402 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007513903 seconds Ending run at 06:21:27 UTC on 2025-12-12. Run time = 3.397936105 Run time without initialization = 3.221417255 Average number of zones advanced per microsecond: 0.814 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.3974 ... 3.3977 ... 3.3981 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2236 2.2610 2.3387 68.82% Gravity::make_radial_gravity() 21 0.2798 0.288 0.2994 8.81% check_for_negative_density() 10 0.02182 0.1002 0.1378 4.06% Castro::estTimeStep() 21 0.0247 0.07252 0.1157 3.40% Castro::initData() 1 0.0338 0.07126 0.1129 3.32% FabArray::ParallelCopy_finish() 41 0.04148 0.05555 0.0976 2.87% amrex::Copy() 193 0.07 0.07943 0.08671 2.55% FabArray::setVal() 143 0.05383 0.06554 0.07208 2.12% Castro::reset_internal_energy(Fab) 1008 0.04573 0.04714 0.04892 1.44% FabArray::ParallelCopy_nowait() 41 0.0351 0.04095 0.04622 1.36% Castro::normalize_species() 62 0.04378 0.04504 0.04609 1.36% FillPatchIterator::Initialize 41 0.02757 0.03371 0.04007 1.18% StateData::FillBoundary(geom) 41 0.02798 0.03063 0.03307 0.97% Castro::computeTemp() 63 0.01776 0.0192 0.02696 0.79% Gravity::interpolate_monopole_grav() 21 0.02558 0.02614 0.02671 0.79% Castro::construct_new_gravity_source() 10 0.02271 0.02393 0.02635 0.78% Castro::initialize_do_advance() 10 0.01163 0.0163 0.01762 0.52% Castro::initialize_advance() 10 0.005246 0.01073 0.01407 0.41% FabArray::Saxpy() 20 0.01025 0.01248 0.01372 0.40% FabArray::setDomainBndry() 41 0.007468 0.01018 0.01355 0.40% Amr::writePlotFile() 2 0.007267 0.01006 0.01254 0.37% VisMF::Write(FabArray) 2 0.008522 0.00974 0.01209 0.36% MultiFab::contains_nan() 20 0.009542 0.01036 0.01177 0.35% Castro::construct_old_gravity_source() 10 0.006815 0.009453 0.01011 0.30% Castro::initMFs() 1 0.006603 0.007364 0.007775 0.23% Castro::construct_new_source() 50 0.005934 0.006137 0.006422 0.19% main() 1 0.003794 0.004132 0.004509 0.13% Gravity::get_new_grav_vector() 11 0.003007 0.003532 0.003865 0.11% Amr::coarseTimeStep() 10 0.0008676 0.002062 0.002731 0.08% Gravity::get_old_grav_vector() 10 0.00165 0.002039 0.002557 0.08% Castro::finalize_do_advance() 10 0.0005987 0.001304 0.001911 0.06% AmrLevel::FillPatch() 41 0.0007151 0.001051 0.001208 0.04% Amr::timeStep() 10 0.0001276 0.0001865 0.0003899 0.01% Castro::Castro() 1 5.848e-05 0.0001002 0.0003081 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002531 0.000269 0.0002907 0.01% Castro::do_advance_ctu() 10 0.0001443 0.0001633 0.0001899 0.01% Castro::clean_state() 62 0.000141 0.0001536 0.0001771 0.01% StateDataPhysBCFunct::() 41 9.599e-05 0.0001162 0.0001475 0.00% FillPatchIterator::FillFromLevel0() 41 9.298e-05 0.0001027 0.0001114 0.00% Castro::do_old_sources() 10 7.036e-05 8.768e-05 0.000104 0.00% FabArray::ParallelCopy() 41 8.393e-05 9.148e-05 9.866e-05 0.00% FillPatchSingleLevel 41 6.669e-05 7.501e-05 8.995e-05 0.00% Castro::construct_old_source() 50 4.356e-05 6.621e-05 7.783e-05 0.00% Amr::FinalizeInit() 1 3.835e-06 1.369e-05 7.577e-05 0.00% Castro::apply_source_to_state() 20 4.077e-05 5.18e-05 7.108e-05 0.00% Castro::do_new_sources() 10 5.026e-05 5.944e-05 6.485e-05 0.00% Castro::subcycle_advance_ctu() 10 4.533e-05 5.042e-05 5.486e-05 0.00% Castro::construct_old_gravity() 10 3.077e-05 3.812e-05 5.431e-05 0.00% Castro::advance() 10 3.033e-05 4.179e-05 5.235e-05 0.00% Amr::defBaseLevel() 1 3.666e-05 4.518e-05 5.192e-05 0.00% Castro::construct_new_gravity() 10 2.827e-05 3.409e-05 4.327e-05 0.00% Castro::expand_state() 10 2.025e-05 2.452e-05 2.968e-05 0.00% Castro::check_for_nan() 20 2.182e-05 2.446e-05 2.709e-05 0.00% Castro::post_timestep() 10 1.407e-05 1.642e-05 1.897e-05 0.00% Castro::post_init() 1 1.426e-05 1.522e-05 1.615e-05 0.00% Castro::computeNewDt() 9 7.916e-06 8.892e-06 9.63e-06 0.00% Amr::InitializeInit() 1 5.945e-06 6.994e-06 8.951e-06 0.00% Castro::computeInitialDt() 2 5.869e-06 6.417e-06 7.405e-06 0.00% Amr::init() 1 1.981e-06 2.626e-06 3.412e-06 0.00% Amr::initialInit() 1 1.714e-06 1.958e-06 2.395e-06 0.00% Other 265 0.01605 0.01863 0.02027 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.397 3.398 3.398 100.00% Amr::coarseTimeStep() 10 3.209 3.209 3.209 94.45% Amr::timeStep() 10 3.196 3.197 3.198 94.11% Castro::advance() 10 3.18 3.181 3.181 93.62% Castro::subcycle_advance_ctu() 10 3.104 3.109 3.123 91.91% Castro::do_advance_ctu() 10 3.104 3.109 3.123 91.91% Castro::construct_ctu_hydro_source() 10 2.379 2.382 2.385 70.18% Gravity::make_radial_gravity() 21 0.2963 0.3044 0.3123 9.19% AmrLevel::FillPatch() 41 0.1829 0.2044 0.2287 6.73% Gravity::get_new_grav_vector() 11 0.2035 0.2049 0.2062 6.07% FillPatchIterator::Initialize 41 0.151 0.1715 0.1986 5.84% Castro::construct_old_gravity() 10 0.1749 0.1792 0.1867 5.49% Gravity::get_old_grav_vector() 10 0.1742 0.1786 0.186 5.47% Castro::construct_new_gravity() 10 0.182 0.1829 0.1838 5.41% Amr::init() 1 0.176 0.1763 0.1763 5.19% Castro::initialize_do_advance() 10 0.1528 0.1607 0.168 4.94% FillPatchIterator::FillFromLevel0() 41 0.1119 0.1276 0.1635 4.81% FillPatchSingleLevel 41 0.1118 0.1275 0.1634 4.81% Amr::initialInit() 1 0.1611 0.1615 0.1616 4.76% check_for_negative_density() 10 0.02182 0.1002 0.1378 4.06% Amr::InitializeInit() 1 0.05293 0.09304 0.1355 3.99% Amr::defBaseLevel() 1 0.05293 0.09304 0.1355 3.99% FabArray::ParallelCopy() 41 0.08316 0.09669 0.1329 3.91% Castro::clean_state() 62 0.1128 0.1169 0.1276 3.75% Castro::expand_state() 10 0.09833 0.1077 0.1206 3.55% Castro::initData() 1 0.0374 0.07514 0.1167 3.43% Castro::estTimeStep() 21 0.0247 0.07252 0.1157 3.40% Castro::do_old_sources() 10 0.1019 0.1057 0.11 3.24% Amr::FinalizeInit() 1 0.02614 0.06842 0.1087 3.20% FabArray::ParallelCopy_finish() 41 0.04148 0.05555 0.0976 2.87% amrex::Copy() 193 0.07 0.07943 0.08671 2.55% Castro::computeInitialDt() 2 0.002319 0.04468 0.08482 2.50% Castro::computeTemp() 63 0.06389 0.06661 0.07617 2.24% Castro::initialize_advance() 10 0.05357 0.06813 0.07375 2.17% FabArray::setVal() 143 0.05383 0.06554 0.07208 2.12% Castro::do_new_sources() 10 0.05855 0.06314 0.06844 2.01% Castro::reset_internal_energy(MultiFab) 63 0.04599 0.04741 0.04921 1.45% Castro::reset_internal_energy(Fab) 1008 0.04573 0.04714 0.04892 1.44% FabArray::ParallelCopy_nowait() 41 0.0352 0.04105 0.04631 1.36% Castro::normalize_species() 62 0.04378 0.04504 0.04609 1.36% StateDataPhysBCFunct::() 41 0.02808 0.03075 0.03321 0.98% StateData::FillBoundary(geom) 41 0.02798 0.03063 0.03307 0.97% Castro::construct_new_source() 50 0.02872 0.03007 0.03278 0.96% Gravity::interpolate_monopole_grav() 21 0.02558 0.02614 0.02671 0.79% Castro::construct_new_gravity_source() 10 0.02271 0.02393 0.02635 0.78% Castro::post_init() 1 0.02295 0.0233 0.02344 0.69% Castro::finalize_do_advance() 10 0.01384 0.01963 0.02304 0.68% Amr::writePlotFile() 2 0.02223 0.02238 0.02281 0.67% Castro::post_timestep() 10 0.01533 0.01579 0.01622 0.48% Castro::apply_source_to_state() 20 0.0103 0.01253 0.01379 0.41% FabArray::Saxpy() 20 0.01025 0.01248 0.01372 0.40% FabArray::setDomainBndry() 41 0.007468 0.01018 0.01355 0.40% Castro::Castro() 1 0.009582 0.01133 0.0121 0.36% VisMF::Write(FabArray) 2 0.008522 0.00974 0.01209 0.36% Castro::check_for_nan() 20 0.009569 0.01039 0.01179 0.35% MultiFab::contains_nan() 20 0.009542 0.01036 0.01177 0.35% Castro::construct_old_source() 50 0.006858 0.009519 0.01018 0.30% Castro::construct_old_gravity_source() 10 0.006815 0.009453 0.01011 0.30% Castro::computeNewDt() 9 0.009512 0.009527 0.009541 0.28% Castro::initMFs() 1 0.006603 0.007364 0.007775 0.23% Other 265 0.02621 0.02998 0.0321 0.94% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 5 B 14 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8640 KiB 8650 KiB 8655 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6743 KiB 6750 KiB 6754 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7117 KiB 7125 KiB 7127 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4553 KiB 4561 KiB 4583 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 201 KiB 223 KiB 252 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2799 KiB 2801 KiB 2802 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 221 KiB 227 KiB 234 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 42 KiB 60 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 76 KiB 77 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 65 KiB 67 KiB 70 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-14-gbb5b55299976) finalized