Initializing AMReX (25.12-15-g4fc753db6b0b)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-15-g4fc753db6b0b) initialized Starting run at 13:55:59 UTC on 2025-12-13. Successfully read inputs file ... Castro git describe: 25.12-3-g06f3e00fb AMReX git describe: 25.12-15-g4fc753db6 Microphysics git describe: 25.12-6-g18b6ec58 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014406532 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.343106003 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.336577905 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.322330171 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.321743124 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.388980387 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.308991505 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.300386568 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.300118104 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.300063189 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.301576083 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007905152 seconds Ending run at 13:56:02 UTC on 2025-12-13. Run time = 3.408461111 Run time without initialization = 3.237167583 Average number of zones advanced per microsecond: 0.810 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.4072 ... 3.4079 ... 3.4087 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2194 2.2612 2.3207 68.08% Gravity::make_radial_gravity() 21 0.2824 0.2923 0.309 9.06% check_for_negative_density() 10 0.03844 0.1021 0.1447 4.25% FabArray::ParallelCopy_finish() 41 0.0432 0.06885 0.1155 3.39% Castro::estTimeStep() 21 0.02531 0.06753 0.1088 3.19% Castro::initData() 1 0.034 0.0705 0.1077 3.16% amrex::Copy() 193 0.06179 0.08207 0.1031 3.02% FabArray::setVal() 143 0.05401 0.06568 0.07381 2.17% Castro::reset_internal_energy(Fab) 1008 0.04581 0.04726 0.05003 1.47% FabArray::ParallelCopy_nowait() 41 0.03528 0.04253 0.04825 1.42% Castro::normalize_species() 62 0.03544 0.03749 0.04231 1.24% FillPatchIterator::Initialize 41 0.02734 0.03402 0.03764 1.10% StateData::FillBoundary(geom) 41 0.02772 0.0315 0.03447 1.01% Gravity::interpolate_monopole_grav() 21 0.02569 0.02635 0.02886 0.85% Castro::construct_new_gravity_source() 10 0.02285 0.02367 0.025 0.73% Castro::computeTemp() 63 0.01777 0.01815 0.01875 0.55% Castro::initialize_do_advance() 10 0.01137 0.01662 0.01782 0.52% FabArray::Saxpy() 20 0.01062 0.01274 0.01717 0.50% Castro::initialize_advance() 10 0.005232 0.0106 0.01391 0.41% Amr::writePlotFile() 2 0.007484 0.01035 0.0128 0.38% VisMF::Write(FabArray) 2 0.008564 0.009625 0.01213 0.36% MultiFab::contains_nan() 20 0.00926 0.01011 0.01137 0.33% FabArray::setDomainBndry() 41 0.007479 0.01009 0.01131 0.33% Castro::construct_old_gravity_source() 10 0.006726 0.009007 0.009999 0.29% Castro::initMFs() 1 0.006741 0.007203 0.007961 0.23% Castro::construct_new_source() 50 0.00552 0.006088 0.006427 0.19% main() 1 0.003856 0.004229 0.004515 0.13% Gravity::get_new_grav_vector() 11 0.002893 0.003616 0.004054 0.12% Gravity::get_old_grav_vector() 10 0.001691 0.002178 0.002667 0.08% Amr::coarseTimeStep() 10 0.001152 0.001753 0.002145 0.06% Castro::finalize_do_advance() 10 0.0006105 0.001097 0.001186 0.03% AmrLevel::FillPatch() 41 0.0007236 0.0009966 0.001128 0.03% FillPatchIterator::FillFromLevel0() 41 9.873e-05 0.0001539 0.0004444 0.01% Amr::timeStep() 10 0.0001298 0.000179 0.0003889 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002606 0.0002739 0.0002882 0.01% Castro::do_advance_ctu() 10 0.0001442 0.0001695 0.0001965 0.01% Castro::clean_state() 62 0.0001442 0.0001587 0.0001829 0.01% StateDataPhysBCFunct::() 41 9.135e-05 0.0001116 0.0001261 0.00% FabArray::ParallelCopy() 41 8.672e-05 9.337e-05 0.0001072 0.00% Amr::FinalizeInit() 1 3.818e-06 1.631e-05 9.919e-05 0.00% Castro::do_old_sources() 10 8.018e-05 8.785e-05 9.598e-05 0.00% FillPatchSingleLevel 41 6.974e-05 7.531e-05 8.596e-05 0.00% Castro::Castro() 1 5.747e-05 6.9e-05 8.25e-05 0.00% Castro::do_new_sources() 10 5.401e-05 6.157e-05 7.314e-05 0.00% Castro::apply_source_to_state() 20 4.689e-05 5.475e-05 7.311e-05 0.00% Castro::construct_old_source() 50 4.31e-05 6.025e-05 6.822e-05 0.00% Amr::defBaseLevel() 1 3.857e-05 4.342e-05 5.746e-05 0.00% Castro::subcycle_advance_ctu() 10 4.511e-05 4.991e-05 5.555e-05 0.00% Castro::advance() 10 3.888e-05 4.38e-05 5.456e-05 0.00% Castro::construct_old_gravity() 10 3.535e-05 4.034e-05 5.105e-05 0.00% Castro::construct_new_gravity() 10 2.981e-05 3.554e-05 4.191e-05 0.00% Castro::check_for_nan() 20 2.4e-05 2.619e-05 3.739e-05 0.00% Castro::expand_state() 10 2.159e-05 2.551e-05 3.107e-05 0.00% Castro::post_init() 1 1.513e-05 1.684e-05 1.868e-05 0.00% Castro::post_timestep() 10 1.519e-05 1.657e-05 1.859e-05 0.00% Castro::computeNewDt() 9 7.779e-06 9.225e-06 1.243e-05 0.00% Amr::InitializeInit() 1 5.482e-06 6.256e-06 7.201e-06 0.00% Castro::computeInitialDt() 2 5.346e-06 6.213e-06 7.052e-06 0.00% Amr::init() 1 1.61e-06 1.936e-06 2.948e-06 0.00% Amr::initialInit() 1 1.463e-06 1.801e-06 2.729e-06 0.00% Other 265 0.01613 0.01857 0.02086 0.61% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.407 3.408 3.409 100.00% Amr::coarseTimeStep() 10 3.225 3.225 3.225 94.61% Amr::timeStep() 10 3.212 3.213 3.213 94.27% Castro::advance() 10 3.197 3.198 3.198 93.83% Castro::subcycle_advance_ctu() 10 3.124 3.128 3.142 92.18% Castro::do_advance_ctu() 10 3.124 3.128 3.142 92.18% Castro::construct_ctu_hydro_source() 10 2.379 2.383 2.389 70.09% Gravity::make_radial_gravity() 21 0.299 0.3087 0.3218 9.44% AmrLevel::FillPatch() 41 0.2032 0.2211 0.2378 6.98% FillPatchIterator::Initialize 41 0.1635 0.1875 0.2138 6.27% Gravity::get_new_grav_vector() 11 0.2017 0.2032 0.2043 5.99% Castro::construct_old_gravity() 10 0.1865 0.1938 0.2029 5.95% Gravity::get_old_grav_vector() 10 0.1857 0.1931 0.2022 5.93% Castro::construct_new_gravity() 10 0.1796 0.1807 0.1814 5.32% FillPatchIterator::FillFromLevel0() 41 0.1154 0.1434 0.179 5.25% FillPatchSingleLevel 41 0.1153 0.1432 0.1789 5.25% Amr::init() 1 0.1704 0.1707 0.1711 5.02% Castro::initialize_do_advance() 10 0.1521 0.161 0.1657 4.86% Amr::initialInit() 1 0.1558 0.156 0.1565 4.59% FabArray::ParallelCopy() 41 0.0845 0.1116 0.151 4.43% check_for_negative_density() 10 0.03844 0.1021 0.1447 4.25% Amr::InitializeInit() 1 0.05478 0.09176 0.1295 3.80% Amr::defBaseLevel() 1 0.05477 0.09175 0.1295 3.80% Castro::expand_state() 10 0.1004 0.1102 0.1193 3.50% Castro::do_old_sources() 10 0.09641 0.112 0.1178 3.46% Castro::clean_state() 62 0.1047 0.1084 0.117 3.43% FabArray::ParallelCopy_finish() 41 0.0432 0.06885 0.1155 3.39% Castro::initData() 1 0.03784 0.07413 0.1108 3.25% Castro::estTimeStep() 21 0.02531 0.06753 0.1088 3.19% amrex::Copy() 193 0.06179 0.08207 0.1031 3.02% Amr::FinalizeInit() 1 0.02646 0.06428 0.1017 2.98% Castro::computeInitialDt() 2 0.002287 0.04021 0.07769 2.28% FabArray::setVal() 143 0.05401 0.06568 0.07381 2.17% Castro::initialize_advance() 10 0.05185 0.06627 0.071 2.08% Castro::computeTemp() 63 0.06398 0.06569 0.06906 2.03% Castro::do_new_sources() 10 0.05833 0.0613 0.06519 1.91% Castro::reset_internal_energy(MultiFab) 63 0.04607 0.04754 0.0503 1.48% Castro::reset_internal_energy(Fab) 1008 0.04581 0.04726 0.05003 1.47% FabArray::ParallelCopy_nowait() 41 0.03539 0.04262 0.04834 1.42% Castro::normalize_species() 62 0.03544 0.03749 0.04231 1.24% StateDataPhysBCFunct::() 41 0.02782 0.03161 0.0346 1.02% StateData::FillBoundary(geom) 41 0.02772 0.0315 0.03447 1.01% Castro::construct_new_source() 50 0.02858 0.02976 0.03116 0.91% Gravity::interpolate_monopole_grav() 21 0.02569 0.02635 0.02886 0.85% Castro::construct_new_gravity_source() 10 0.02285 0.02367 0.025 0.73% Castro::post_init() 1 0.02342 0.02379 0.02399 0.70% Amr::writePlotFile() 2 0.02249 0.02261 0.0231 0.68% Castro::finalize_do_advance() 10 0.015 0.0192 0.0231 0.68% Castro::apply_source_to_state() 20 0.01068 0.0128 0.01724 0.51% FabArray::Saxpy() 20 0.01062 0.01274 0.01717 0.50% Castro::post_timestep() 10 0.01424 0.01455 0.01498 0.44% VisMF::Write(FabArray) 2 0.008564 0.009625 0.01213 0.36% Castro::Castro() 1 0.01044 0.01113 0.01195 0.35% Castro::check_for_nan() 20 0.009284 0.01013 0.01139 0.33% MultiFab::contains_nan() 20 0.00926 0.01011 0.01137 0.33% FabArray::setDomainBndry() 41 0.007479 0.01009 0.01131 0.33% Castro::construct_old_source() 50 0.00677 0.009067 0.01006 0.30% Castro::construct_old_gravity_source() 10 0.006726 0.009007 0.009999 0.29% Castro::computeNewDt() 9 0.009218 0.009231 0.009243 0.27% Castro::initMFs() 1 0.006741 0.007203 0.007961 0.23% Other 265 0.02628 0.02973 0.03328 0.98% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 6 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8638 KiB 8650 KiB 8655 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6753 KiB 6763 KiB 6767 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7114 KiB 7125 KiB 7127 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4567 KiB 4575 KiB 4597 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 215 KiB 235 KiB 256 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2804 KiB 2808 KiB 2809 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 223 KiB 230 KiB 240 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 46 KiB 65 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 75 KiB 76 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 72 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-15-g4fc753db6b0b) finalized