Initializing AMReX (25.12-20-g0b12238a17ba)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-20-g0b12238a17ba) initialized Starting run at 06:30:19 UTC on 2025-12-16. Successfully read inputs file ... Castro git describe: 25.12-3-g1a56f02d6 AMReX git describe: 25.12-20-g0b12238a1 Microphysics git describe: 25.12-8-g8ff09dc5 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014556033 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.345324225 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.343171997 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.314988056 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.316819591 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.359916563 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.306699907 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.326370648 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.329688279 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.309482583 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.300260522 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007578804 seconds Ending run at 06:30:23 UTC on 2025-12-16. Run time = 3.427010044 Run time without initialization = 3.265627042 Average number of zones advanced per microsecond: 0.803 Average number of zones advanced per microsecond per rank: 0.100 TinyProfiler total time across processes [min...avg...max]: 3.4255 ... 3.4263 ... 3.4270 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2368 2.2914 2.3829 69.53% Gravity::make_radial_gravity() 21 0.2798 0.2917 0.3061 8.93% check_for_negative_density() 10 0.02239 0.12 0.178 5.19% Castro::initData() 1 0.03385 0.06918 0.09864 2.88% amrex::Copy() 193 0.06608 0.07988 0.08918 2.60% Castro::estTimeStep() 21 0.02354 0.05801 0.08891 2.59% FabArray::ParallelCopy_finish() 41 0.03735 0.04937 0.08886 2.59% FabArray::setVal() 143 0.05398 0.06653 0.07304 2.13% Castro::reset_internal_energy(Fab) 1008 0.04622 0.04721 0.04965 1.45% Castro::normalize_species() 62 0.04136 0.04237 0.04385 1.28% FabArray::ParallelCopy_nowait() 41 0.03611 0.04096 0.04312 1.26% StateData::FillBoundary(geom) 41 0.02692 0.03105 0.03468 1.01% FillPatchIterator::Initialize 41 0.02793 0.03223 0.03444 1.00% Castro::construct_new_gravity_source() 10 0.02254 0.02414 0.02662 0.78% Gravity::interpolate_monopole_grav() 21 0.02577 0.02585 0.02604 0.76% Castro::computeTemp() 63 0.01778 0.01822 0.01886 0.55% Castro::initialize_do_advance() 10 0.01152 0.01619 0.01835 0.54% Castro::initialize_advance() 10 0.005536 0.01083 0.0139 0.41% FabArray::Saxpy() 20 0.01104 0.01276 0.01378 0.40% VisMF::Write(FabArray) 2 0.009233 0.009772 0.01274 0.37% MultiFab::contains_nan() 20 0.009463 0.01049 0.01244 0.36% FabArray::setDomainBndry() 41 0.008826 0.01015 0.01126 0.33% Castro::construct_old_gravity_source() 10 0.00683 0.009638 0.01025 0.30% Amr::writePlotFile() 2 0.007298 0.009533 0.01008 0.29% Castro::initMFs() 1 0.006514 0.007201 0.008459 0.25% Castro::construct_new_source() 50 0.005595 0.006168 0.006654 0.19% main() 1 0.004127 0.004506 0.004853 0.14% Gravity::get_new_grav_vector() 11 0.003083 0.003679 0.004085 0.12% Amr::coarseTimeStep() 10 0.00111 0.002089 0.002848 0.08% Gravity::get_old_grav_vector() 10 0.001562 0.002056 0.002562 0.07% Castro::finalize_do_advance() 10 0.0006043 0.001125 0.001614 0.05% AmrLevel::FillPatch() 41 0.0007746 0.001119 0.001257 0.04% Amr::timeStep() 10 0.0001257 0.0001801 0.0003868 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002559 0.0002733 0.0002951 0.01% Castro::do_advance_ctu() 10 0.000144 0.0001573 0.0001773 0.01% Castro::clean_state() 62 0.000134 0.0001562 0.0001703 0.00% StateDataPhysBCFunct::() 41 9.035e-05 0.0001093 0.0001241 0.00% FillPatchIterator::FillFromLevel0() 41 9.563e-05 0.0001049 0.000116 0.00% Amr::defBaseLevel() 1 3.793e-05 5.424e-05 0.000103 0.00% Castro::do_old_sources() 10 8.091e-05 8.947e-05 0.0001025 0.00% FabArray::ParallelCopy() 41 8.286e-05 8.896e-05 9.389e-05 0.00% Castro::construct_old_source() 50 5.067e-05 6.355e-05 8.754e-05 0.00% FillPatchSingleLevel 41 6.925e-05 7.455e-05 8.31e-05 0.00% Castro::Castro() 1 4.884e-05 6.766e-05 8.14e-05 0.00% Amr::FinalizeInit() 1 3.988e-06 1.257e-05 6.641e-05 0.00% Castro::do_new_sources() 10 5.201e-05 5.723e-05 6.374e-05 0.00% Castro::advance() 10 4.108e-05 4.528e-05 5.682e-05 0.00% Castro::subcycle_advance_ctu() 10 4.337e-05 4.925e-05 5.493e-05 0.00% Castro::apply_source_to_state() 20 4.384e-05 4.966e-05 5.261e-05 0.00% Castro::construct_old_gravity() 10 3.281e-05 3.614e-05 4.039e-05 0.00% Castro::construct_new_gravity() 10 2.952e-05 3.455e-05 3.941e-05 0.00% Castro::check_for_nan() 20 2.214e-05 2.476e-05 3.331e-05 0.00% Castro::expand_state() 10 2.159e-05 2.358e-05 2.547e-05 0.00% Castro::post_init() 1 1.518e-05 1.696e-05 1.992e-05 0.00% Castro::post_timestep() 10 1.351e-05 1.612e-05 1.869e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.552e-06 1.117e-05 1.418e-05 0.00% Castro::computeNewDt() 9 7.279e-06 9.015e-06 9.994e-06 0.00% Amr::InitializeInit() 1 5.835e-06 6.721e-06 9.798e-06 0.00% Castro::computeInitialDt() 2 5.445e-06 6.643e-06 7.512e-06 0.00% Amr::initialInit() 1 1.831e-06 2.177e-06 2.732e-06 0.00% Amr::init() 1 1.795e-06 2.029e-06 2.345e-06 0.00% Other 264 0.0148 0.01903 0.0216 0.63% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.426 3.426 3.427 100.00% Amr::coarseTimeStep() 10 3.253 3.253 3.253 94.93% Amr::timeStep() 10 3.239 3.24 3.241 94.57% Castro::advance() 10 3.224 3.224 3.225 94.11% Castro::subcycle_advance_ctu() 10 3.147 3.152 3.168 92.45% Castro::do_advance_ctu() 10 3.147 3.152 3.168 92.44% Castro::construct_ctu_hydro_source() 10 2.427 2.432 2.435 71.05% Gravity::make_radial_gravity() 21 0.2963 0.3084 0.3194 9.32% AmrLevel::FillPatch() 41 0.1875 0.1969 0.2144 6.26% Gravity::get_new_grav_vector() 11 0.2046 0.2061 0.2074 6.05% Castro::construct_old_gravity() 10 0.1756 0.1839 0.1941 5.66% Gravity::get_old_grav_vector() 10 0.1748 0.1832 0.1934 5.64% FillPatchIterator::Initialize 41 0.1549 0.1642 0.1898 5.54% Castro::construct_new_gravity() 10 0.1825 0.1831 0.1837 5.36% check_for_negative_density() 10 0.02239 0.12 0.178 5.19% Castro::initialize_do_advance() 10 0.158 0.1613 0.1673 4.88% Amr::init() 1 0.1597 0.1606 0.161 4.70% FillPatchIterator::FillFromLevel0() 41 0.1147 0.1218 0.1523 4.45% FillPatchSingleLevel 41 0.1146 0.1217 0.1522 4.44% Amr::initialInit() 1 0.145 0.1463 0.1468 4.28% FabArray::ParallelCopy() 41 0.08065 0.0905 0.1252 3.65% Castro::expand_state() 10 0.1049 0.1092 0.121 3.53% Amr::InitializeInit() 1 0.05505 0.0907 0.1196 3.49% Amr::defBaseLevel() 1 0.05504 0.0907 0.1196 3.49% Castro::clean_state() 62 0.1108 0.1133 0.1177 3.44% Castro::initData() 1 0.03761 0.07295 0.1027 3.00% Castro::do_old_sources() 10 0.09021 0.09423 0.09716 2.84% Amr::FinalizeInit() 1 0.02718 0.05559 0.09175 2.68% amrex::Copy() 193 0.06608 0.07988 0.08918 2.60% Castro::estTimeStep() 21 0.02354 0.05801 0.08891 2.59% FabArray::ParallelCopy_finish() 41 0.03735 0.04937 0.08886 2.59% Castro::initialize_advance() 10 0.05246 0.06889 0.07437 2.17% FabArray::setVal() 143 0.05398 0.06653 0.07304 2.13% Castro::computeTemp() 63 0.06426 0.06571 0.0687 2.00% Castro::do_new_sources() 10 0.05857 0.06318 0.06859 2.00% Castro::computeInitialDt() 2 0.002293 0.03074 0.06681 1.95% Castro::reset_internal_energy(MultiFab) 63 0.04648 0.04748 0.04993 1.46% Castro::reset_internal_energy(Fab) 1008 0.04622 0.04721 0.04965 1.45% Castro::normalize_species() 62 0.04136 0.04237 0.04385 1.28% FabArray::ParallelCopy_nowait() 41 0.03622 0.04104 0.04321 1.26% StateDataPhysBCFunct::() 41 0.02702 0.03116 0.03479 1.02% StateData::FillBoundary(geom) 41 0.02692 0.03105 0.03468 1.01% Castro::construct_new_source() 50 0.02813 0.03031 0.03328 0.97% Castro::construct_new_gravity_source() 10 0.02254 0.02414 0.02662 0.78% Gravity::interpolate_monopole_grav() 21 0.02577 0.02585 0.02604 0.76% Castro::post_init() 1 0.02365 0.02436 0.02455 0.72% Castro::finalize_do_advance() 10 0.01229 0.01853 0.02248 0.66% Amr::writePlotFile() 2 0.02187 0.022 0.02237 0.65% Castro::post_timestep() 10 0.015 0.01553 0.0163 0.48% Castro::apply_source_to_state() 20 0.01109 0.01281 0.01382 0.40% FabArray::Saxpy() 20 0.01104 0.01276 0.01378 0.40% VisMF::Write(FabArray) 2 0.009233 0.009772 0.01274 0.37% Castro::check_for_nan() 20 0.009496 0.01051 0.01246 0.36% MultiFab::contains_nan() 20 0.009463 0.01049 0.01244 0.36% Castro::Castro() 1 0.009979 0.01089 0.01185 0.35% FabArray::setDomainBndry() 41 0.008826 0.01015 0.01126 0.33% Castro::construct_old_source() 50 0.00688 0.009702 0.01031 0.30% Castro::construct_old_gravity_source() 10 0.00683 0.009638 0.01025 0.30% Castro::computeNewDt() 9 0.009613 0.009877 0.009926 0.29% Castro::initMFs() 1 0.006514 0.007201 0.008459 0.25% AmrLevel::AmrLevel(dm) 1 0.005364 0.005826 0.006472 0.19% Other 264 0.01941 0.02486 0.02834 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8639 KiB 8651 KiB 8655 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6784 KiB 6787 KiB 6788 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7118 KiB 7125 KiB 7128 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4579 KiB 4587 KiB 4606 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 206 KiB 215 KiB 237 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2813 KiB 2817 KiB 2818 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 220 KiB 229 KiB 237 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 40 KiB 57 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 76 KiB 77 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 65 KiB 68 KiB 72 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-20-g0b12238a17ba) finalized