Initializing AMReX (25.12-21-gbd922c6216e0)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-21-gbd922c6216e0) initialized Starting run at 13:45:13 UTC on 2025-12-17. Successfully read inputs file ... Castro git describe: 25.12-5-g5c59c2ec2 AMReX git describe: 25.12-21-gbd922c621 Microphysics git describe: 25.12-9-g15899a4c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015596607 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.343136335 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.347880744 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.357900184 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.370764513 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.370424689 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.361253577 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.359056051 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.361921178 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.363433778 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.364079117 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.012476848 seconds Ending run at 13:45:17 UTC on 2025-12-17. Run time = 3.788087003 Run time without initialization = 3.620279068 Average number of zones advanced per microsecond: 0.724 Average number of zones advanced per microsecond per rank: 0.091 TinyProfiler total time across processes [min...avg...max]: 3.7859 ... 3.7870 ... 3.7881 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1879 2.3595 2.5242 66.63% check_for_negative_density() 10 0.0351 0.2052 0.381 10.06% Gravity::make_radial_gravity() 21 0.2952 0.3169 0.3412 9.01% amrex::Copy() 193 0.09807 0.1115 0.1233 3.26% Castro::initData() 1 0.03609 0.06937 0.1002 2.64% FabArray::setVal() 143 0.09118 0.09521 0.09873 2.61% Castro::estTimeStep() 21 0.02649 0.06153 0.09852 2.60% FabArray::ParallelCopy_nowait() 41 0.05701 0.06074 0.06408 1.69% FabArray::ParallelCopy_finish() 41 0.052 0.05543 0.06019 1.59% FillPatchIterator::Initialize 41 0.04781 0.05261 0.05825 1.54% StateData::FillBoundary(geom) 41 0.03321 0.03872 0.05192 1.37% Castro::reset_internal_energy(Fab) 1008 0.04764 0.04979 0.05136 1.36% Castro::normalize_species() 62 0.04275 0.04653 0.05066 1.34% Castro::construct_new_gravity_source() 10 0.02751 0.03106 0.03385 0.89% Castro::initialize_do_advance() 10 0.02089 0.02442 0.02695 0.71% Gravity::interpolate_monopole_grav() 21 0.02611 0.02633 0.02673 0.71% FabArray::setDomainBndry() 41 0.01705 0.019 0.0206 0.54% Castro::computeTemp() 63 0.01804 0.01945 0.02049 0.54% FabArray::Saxpy() 20 0.01655 0.01842 0.01983 0.52% Castro::initialize_advance() 10 0.01442 0.01497 0.01551 0.41% Castro::construct_old_gravity_source() 10 0.01449 0.01495 0.01544 0.41% MultiFab::contains_nan() 20 0.01086 0.01354 0.01524 0.40% VisMF::Write(FabArray) 2 0.009968 0.01162 0.0149 0.39% Amr::writePlotFile() 2 0.008901 0.01229 0.01401 0.37% Castro::construct_new_source() 50 0.007384 0.008046 0.008788 0.23% Castro::initMFs() 1 0.006566 0.00711 0.00822 0.22% main() 1 0.00612 0.007084 0.007542 0.20% Castro::enforce_min_density() 62 0.006323 0.007085 0.007469 0.20% Gravity::get_new_grav_vector() 11 0.003571 0.004864 0.005786 0.15% Amr::coarseTimeStep() 10 0.00184 0.003172 0.0039 0.10% Gravity::get_old_grav_vector() 10 0.002699 0.002963 0.00336 0.09% Castro::finalize_do_advance() 10 0.001291 0.001331 0.001364 0.04% AmrLevel::FillPatch() 41 0.0009803 0.001033 0.001067 0.03% Amr::timeStep() 10 0.0001322 0.0002148 0.0005412 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002973 0.0003099 0.0003245 0.01% Castro::clean_state() 62 0.0001834 0.0002004 0.000246 0.01% Castro::do_advance_ctu() 10 0.0001882 0.0002061 0.0002325 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001375 0.0001542 0.0001811 0.00% StateDataPhysBCFunct::() 41 0.0001349 0.0001461 0.0001689 0.00% Castro::do_old_sources() 10 8.701e-05 0.0001157 0.0001444 0.00% FabArray::ParallelCopy() 41 0.0001167 0.0001274 0.0001419 0.00% Castro::construct_old_source() 50 7.025e-05 9.179e-05 0.0001109 0.00% FillPatchSingleLevel 41 7.857e-05 8.816e-05 0.0001042 0.00% Castro::do_new_sources() 10 5.371e-05 7.035e-05 8.512e-05 0.00% Castro::Castro() 1 5.235e-05 7.132e-05 8.468e-05 0.00% Amr::FinalizeInit() 1 3.9e-06 1.395e-05 8.047e-05 0.00% Castro::subcycle_advance_ctu() 10 5.318e-05 6.528e-05 8.005e-05 0.00% Castro::apply_source_to_state() 20 5.835e-05 6.777e-05 7.351e-05 0.00% Castro::advance() 10 4.181e-05 5.043e-05 6.927e-05 0.00% Castro::expand_state() 10 3.311e-05 4.032e-05 5.29e-05 0.00% Castro::construct_old_gravity() 10 3.911e-05 4.551e-05 5.122e-05 0.00% Castro::construct_new_gravity() 10 3.366e-05 3.696e-05 4.786e-05 0.00% Amr::defBaseLevel() 1 2.574e-05 2.954e-05 3.551e-05 0.00% Castro::check_for_nan() 20 2.413e-05 2.894e-05 3.376e-05 0.00% Castro::post_timestep() 10 1.796e-05 2.144e-05 2.598e-05 0.00% Castro::post_init() 1 1.406e-05 1.59e-05 1.854e-05 0.00% Castro::computeNewDt() 9 8.368e-06 9.119e-06 1.001e-05 0.00% Castro::computeInitialDt() 2 5.254e-06 6.302e-06 8.635e-06 0.00% Amr::InitializeInit() 1 5.142e-06 5.96e-06 6.435e-06 0.00% Amr::init() 1 2.029e-06 2.567e-06 3.567e-06 0.00% Amr::initialInit() 1 1.448e-06 1.746e-06 1.988e-06 0.00% Other 203 0.01044 0.01295 0.01566 0.41% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.786 3.787 3.788 100.00% Amr::coarseTimeStep() 10 3.6 3.6 3.6 95.04% Amr::timeStep() 10 3.586 3.586 3.588 94.71% Castro::advance() 10 3.569 3.57 3.57 94.25% Castro::subcycle_advance_ctu() 10 3.469 3.471 3.474 91.70% Castro::do_advance_ctu() 10 3.469 3.471 3.474 91.70% Castro::construct_ctu_hydro_source() 10 2.581 2.587 2.592 68.42% check_for_negative_density() 10 0.0351 0.2052 0.381 10.06% Gravity::make_radial_gravity() 21 0.3191 0.3393 0.3624 9.57% AmrLevel::FillPatch() 41 0.2558 0.2742 0.3038 8.02% FillPatchIterator::Initialize 41 0.2143 0.2271 0.2497 6.59% Castro::initialize_do_advance() 10 0.2043 0.2207 0.2432 6.42% Gravity::get_new_grav_vector() 11 0.232 0.2336 0.2349 6.20% Castro::construct_old_gravity() 10 0.1854 0.2043 0.2223 5.87% Gravity::get_old_grav_vector() 10 0.1845 0.2033 0.2214 5.85% Castro::construct_new_gravity() 10 0.207 0.2085 0.21 5.54% Castro::expand_state() 10 0.1373 0.1539 0.1789 4.72% FillPatchIterator::FillFromLevel0() 41 0.1454 0.1555 0.1756 4.63% FillPatchSingleLevel 41 0.1452 0.1554 0.1754 4.63% Amr::init() 1 0.1663 0.1668 0.1676 4.42% Amr::initialInit() 1 0.1503 0.1511 0.152 4.01% Castro::do_old_sources() 10 0.1299 0.1319 0.1347 3.56% Castro::clean_state() 62 0.1195 0.1225 0.1261 3.33% amrex::Copy() 193 0.09807 0.1115 0.1233 3.26% FabArray::ParallelCopy() 41 0.1118 0.1164 0.1232 3.25% Amr::InitializeInit() 1 0.05733 0.09066 0.1212 3.20% Amr::defBaseLevel() 1 0.05732 0.09065 0.1212 3.20% Castro::initData() 1 0.03939 0.07309 0.104 2.75% FabArray::setVal() 143 0.09118 0.09521 0.09873 2.61% Castro::estTimeStep() 21 0.02649 0.06153 0.09852 2.60% Castro::initialize_advance() 10 0.09107 0.09402 0.09628 2.54% Amr::FinalizeInit() 1 0.02946 0.06043 0.09318 2.46% Castro::do_new_sources() 10 0.07283 0.07825 0.08287 2.19% Castro::computeTemp() 63 0.06666 0.06955 0.07183 1.90% Castro::computeInitialDt() 2 0.00338 0.03401 0.06686 1.76% FabArray::ParallelCopy_nowait() 41 0.05711 0.06086 0.0642 1.69% FabArray::ParallelCopy_finish() 41 0.052 0.05543 0.06019 1.59% StateDataPhysBCFunct::() 41 0.03335 0.03886 0.05209 1.38% StateData::FillBoundary(geom) 41 0.03321 0.03872 0.05192 1.37% Castro::reset_internal_energy(MultiFab) 63 0.04795 0.0501 0.05167 1.36% Castro::reset_internal_energy(Fab) 1008 0.04764 0.04979 0.05136 1.36% Castro::normalize_species() 62 0.04275 0.04653 0.05066 1.34% Castro::construct_new_source() 50 0.03518 0.03911 0.04263 1.13% Castro::construct_new_gravity_source() 10 0.02751 0.03106 0.03385 0.89% Amr::writePlotFile() 2 0.02795 0.02824 0.02857 0.75% Gravity::interpolate_monopole_grav() 21 0.02611 0.02633 0.02673 0.71% Castro::post_init() 1 0.0259 0.02609 0.02634 0.70% Castro::finalize_do_advance() 10 0.01353 0.01933 0.02592 0.68% FabArray::setDomainBndry() 41 0.01705 0.019 0.0206 0.54% Castro::apply_source_to_state() 20 0.01662 0.01849 0.0199 0.53% FabArray::Saxpy() 20 0.01655 0.01842 0.01983 0.52% Castro::post_timestep() 10 0.01536 0.01617 0.01743 0.46% Castro::construct_old_source() 50 0.01456 0.01504 0.01555 0.41% Castro::construct_old_gravity_source() 10 0.01449 0.01495 0.01544 0.41% Castro::check_for_nan() 20 0.01089 0.01357 0.01527 0.40% MultiFab::contains_nan() 20 0.01086 0.01354 0.01524 0.40% VisMF::Write(FabArray) 2 0.009968 0.01162 0.0149 0.39% Castro::Castro() 1 0.009897 0.01097 0.01215 0.32% Castro::computeNewDt() 9 0.009511 0.009538 0.009558 0.25% Castro::initMFs() 1 0.006566 0.00711 0.00822 0.22% Castro::enforce_min_density() 62 0.006323 0.007085 0.007469 0.20% Other 203 0.02193 0.02599 0.03083 0.81% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 12 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 12 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8643 KiB 8652 KiB 8655 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6800 KiB 6805 KiB 6807 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7120 KiB 7126 KiB 7128 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4568 KiB 4570 KiB 4574 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 252 KiB 275 KiB 311 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 17 KiB 19 KiB 22 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2819 KiB 2822 KiB 2823 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 214 KiB 227 KiB 243 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 44 KiB 47 KiB 51 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2025 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 78 KiB 79 KiB 79 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 62 KiB 68 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-21-gbd922c6216e0) finalized