Initializing AMReX (25.12-21-gbd922c6216e0)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-21-gbd922c6216e0) initialized Starting run at 16:09:44 UTC on 2025-12-17. Successfully read inputs file ... Castro git describe: 25.12-12-gff2dde0f7 AMReX git describe: 25.12-21-gbd922c621 Microphysics git describe: 25.12-9-g15899a4c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014163609 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.33282403 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.318774506 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.301405957 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.301602483 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.344286669 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.2968544 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.283540274 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.289161638 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.286894319 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.287084568 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007689543 seconds Ending run at 16:09:47 UTC on 2025-12-17. Run time = 3.23277541 Run time without initialization = 3.054970488 Average number of zones advanced per microsecond: 0.858 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2315 ... 3.2322 ... 3.2328 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0924 2.1252 2.1792 67.41% Gravity::make_radial_gravity() 21 0.2791 0.2844 0.2974 9.20% check_for_negative_density() 10 0.02795 0.08236 0.1177 3.64% Castro::estTimeStep() 21 0.02443 0.07454 0.1161 3.59% Castro::initData() 1 0.03433 0.07076 0.1144 3.54% amrex::Copy() 193 0.06336 0.07957 0.08659 2.68% FabArray::ParallelCopy_finish() 41 0.03801 0.04663 0.08239 2.55% FabArray::setVal() 143 0.06078 0.06718 0.07056 2.18% Castro::normalize_species() 62 0.04204 0.04648 0.0581 1.80% Castro::reset_internal_energy(Fab) 1008 0.04628 0.04725 0.04898 1.52% FabArray::ParallelCopy_nowait() 41 0.03522 0.03991 0.04163 1.29% FillPatchIterator::Initialize 41 0.02773 0.03175 0.0338 1.05% StateData::FillBoundary(geom) 41 0.02866 0.03026 0.03232 1.00% Castro::construct_new_gravity_source() 10 0.02318 0.02428 0.02626 0.81% Gravity::interpolate_monopole_grav() 21 0.0257 0.02589 0.02623 0.81% Castro::computeTemp() 63 0.01807 0.01836 0.01879 0.58% Castro::initialize_do_advance() 10 0.01248 0.01656 0.01871 0.58% Castro::initialize_advance() 10 0.0053 0.01078 0.01336 0.41% FabArray::Saxpy() 20 0.01063 0.01251 0.01333 0.41% Amr::writePlotFile() 2 0.007181 0.01012 0.01195 0.37% VisMF::Write(FabArray) 2 0.00888 0.009423 0.01187 0.37% MultiFab::contains_nan() 20 0.009039 0.01003 0.01099 0.34% FabArray::setDomainBndry() 41 0.007582 0.009631 0.01077 0.33% Castro::construct_old_gravity_source() 10 0.007056 0.009823 0.01038 0.32% Castro::initMFs() 1 0.006525 0.007163 0.008304 0.26% Castro::construct_new_source() 50 0.005737 0.006315 0.006679 0.21% Castro::enforce_min_density() 62 0.005602 0.006032 0.006498 0.20% main() 1 0.003991 0.004184 0.004478 0.14% Amr::coarseTimeStep() 10 0.001026 0.003081 0.004024 0.12% Gravity::get_new_grav_vector() 11 0.002889 0.003255 0.003658 0.11% Gravity::get_old_grav_vector() 10 0.001698 0.002096 0.002429 0.08% Castro::finalize_do_advance() 10 0.0005847 0.001113 0.001254 0.04% AmrLevel::FillPatch() 41 0.0007882 0.0008592 0.0009336 0.03% Amr::timeStep() 10 0.0001304 0.0001796 0.0003759 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000261 0.0002769 0.000293 0.01% Castro::do_advance_ctu() 10 0.0001358 0.0001672 0.0001867 0.01% Castro::clean_state() 62 0.0001365 0.0001532 0.0001672 0.01% StateDataPhysBCFunct::() 41 8.577e-05 0.0001109 0.0001336 0.00% FillPatchIterator::FillFromLevel0() 41 8.754e-05 0.0001061 0.0001173 0.00% FabArray::ParallelCopy() 41 7.591e-05 8.996e-05 0.000111 0.00% Castro::do_old_sources() 10 6.169e-05 8.425e-05 9.523e-05 0.00% Castro::Castro() 1 5.671e-05 6.859e-05 8.589e-05 0.00% Castro::construct_old_source() 50 4.065e-05 7.171e-05 8.565e-05 0.00% Amr::FinalizeInit() 1 3.304e-06 1.25e-05 7.022e-05 0.00% FillPatchSingleLevel 41 5.371e-05 6.389e-05 6.92e-05 0.00% Castro::do_new_sources() 10 4.334e-05 5.721e-05 6.495e-05 0.00% Castro::apply_source_to_state() 20 3.823e-05 5.387e-05 6.46e-05 0.00% Castro::subcycle_advance_ctu() 10 4.099e-05 4.971e-05 5.525e-05 0.00% Castro::advance() 10 3.574e-05 4.236e-05 5.32e-05 0.00% Amr::defBaseLevel() 1 2.88e-05 3.487e-05 4.952e-05 0.00% Castro::construct_old_gravity() 10 3.136e-05 3.622e-05 4.51e-05 0.00% Castro::construct_new_gravity() 10 2.736e-05 3.42e-05 4.335e-05 0.00% Castro::expand_state() 10 2.068e-05 2.422e-05 2.858e-05 0.00% Castro::check_for_nan() 20 2.122e-05 2.406e-05 2.672e-05 0.00% Castro::post_init() 1 1.409e-05 1.675e-05 1.963e-05 0.00% Castro::post_timestep() 10 1.366e-05 1.591e-05 1.933e-05 0.00% Amr::InitializeInit() 1 5.874e-06 7.865e-06 1.339e-05 0.00% Amr::initialInit() 1 1.493e-06 3.135e-06 1.187e-05 0.00% Castro::computeNewDt() 9 8.056e-06 8.909e-06 9.913e-06 0.00% Castro::computeInitialDt() 2 5.069e-06 6.609e-06 8.852e-06 0.00% Amr::init() 1 1.709e-06 2.133e-06 2.599e-06 0.00% Other 203 0.01027 0.01262 0.0146 0.45% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.231 3.232 3.233 100.00% Amr::coarseTimeStep() 10 3.043 3.043 3.043 94.13% Amr::timeStep() 10 3.028 3.029 3.031 93.76% Castro::advance() 10 3.012 3.012 3.013 93.19% Castro::subcycle_advance_ctu() 10 2.934 2.94 2.95 91.26% Castro::do_advance_ctu() 10 2.934 2.94 2.95 91.26% Castro::construct_ctu_hydro_source() 10 2.225 2.229 2.231 69.01% Gravity::make_radial_gravity() 21 0.2956 0.3009 0.3098 9.58% AmrLevel::FillPatch() 41 0.1818 0.1914 0.207 6.40% Gravity::get_new_grav_vector() 11 0.1994 0.202 0.2034 6.29% Castro::construct_old_gravity() 10 0.1756 0.1781 0.1856 5.74% Gravity::get_old_grav_vector() 10 0.175 0.1775 0.1849 5.72% FillPatchIterator::Initialize 41 0.1496 0.1586 0.182 5.63% Castro::construct_new_gravity() 10 0.1776 0.1802 0.1817 5.62% Amr::init() 1 0.1764 0.1771 0.1778 5.50% Amr::initialInit() 1 0.162 0.1627 0.1634 5.06% Castro::initialize_do_advance() 10 0.1548 0.1582 0.1615 5.00% FillPatchIterator::FillFromLevel0() 41 0.1103 0.1173 0.1467 4.54% FillPatchSingleLevel 41 0.1101 0.1172 0.1466 4.53% Amr::InitializeInit() 1 0.05531 0.09207 0.1362 4.21% Amr::defBaseLevel() 1 0.0553 0.09206 0.1362 4.21% Castro::clean_state() 62 0.1126 0.1177 0.1302 4.03% Castro::initData() 1 0.03837 0.0746 0.1179 3.65% FabArray::ParallelCopy() 41 0.07984 0.08671 0.1178 3.64% check_for_negative_density() 10 0.02795 0.08236 0.1177 3.64% Castro::estTimeStep() 21 0.02443 0.07454 0.1161 3.59% Castro::expand_state() 10 0.1015 0.1062 0.1141 3.53% Amr::FinalizeInit() 1 0.02591 0.07061 0.1081 3.34% Castro::do_old_sources() 10 0.0915 0.0942 0.09791 3.03% amrex::Copy() 193 0.06336 0.07957 0.08659 2.68% Castro::computeInitialDt() 2 0.002438 0.04715 0.08459 2.62% FabArray::ParallelCopy_finish() 41 0.03801 0.04663 0.08239 2.55% Castro::initialize_advance() 10 0.05827 0.0694 0.07468 2.31% FabArray::setVal() 143 0.06078 0.06718 0.07056 2.18% Castro::do_new_sources() 10 0.0609 0.06512 0.07024 2.17% Castro::computeTemp() 63 0.06465 0.06589 0.06805 2.11% Castro::normalize_species() 62 0.04204 0.04648 0.0581 1.80% Castro::reset_internal_energy(MultiFab) 63 0.04655 0.04753 0.04927 1.52% Castro::reset_internal_energy(Fab) 1008 0.04628 0.04725 0.04898 1.52% FabArray::ParallelCopy_nowait() 41 0.03531 0.04 0.04173 1.29% Castro::construct_new_source() 50 0.02904 0.03059 0.03294 1.02% StateDataPhysBCFunct::() 41 0.02874 0.03037 0.03242 1.00% StateData::FillBoundary(geom) 41 0.02866 0.03026 0.03232 1.00% Castro::construct_new_gravity_source() 10 0.02318 0.02428 0.02626 0.81% Gravity::interpolate_monopole_grav() 21 0.0257 0.02589 0.02623 0.81% Castro::post_init() 1 0.02279 0.02306 0.02324 0.72% Castro::finalize_do_advance() 10 0.01374 0.019 0.02322 0.72% Amr::writePlotFile() 2 0.02209 0.02222 0.02266 0.70% Castro::post_timestep() 10 0.01553 0.01646 0.01873 0.58% Castro::apply_source_to_state() 20 0.01067 0.01256 0.01338 0.41% FabArray::Saxpy() 20 0.01063 0.01251 0.01333 0.41% Castro::Castro() 1 0.01002 0.01091 0.012 0.37% VisMF::Write(FabArray) 2 0.00888 0.009423 0.01187 0.37% Castro::check_for_nan() 20 0.009063 0.01006 0.01101 0.34% MultiFab::contains_nan() 20 0.009039 0.01003 0.01099 0.34% FabArray::setDomainBndry() 41 0.007582 0.009631 0.01077 0.33% Castro::construct_old_source() 50 0.007097 0.009894 0.01046 0.32% Castro::construct_old_gravity_source() 10 0.007056 0.009823 0.01038 0.32% Castro::computeNewDt() 9 0.009497 0.00951 0.00953 0.29% Castro::initMFs() 1 0.006525 0.007163 0.008304 0.26% Castro::enforce_min_density() 62 0.005602 0.006032 0.006498 0.20% Other 203 0.02028 0.02415 0.02784 0.86% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8637 KiB 8648 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6722 KiB 6728 KiB 6732 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7116 KiB 7123 KiB 7126 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4525 KiB 4533 KiB 4551 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 211 KiB 222 KiB 241 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2786 KiB 2789 KiB 2790 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 232 KiB 236 KiB 244 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 38 KiB 41 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 79 KiB 80 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 70 KiB 73 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-21-gbd922c6216e0) finalized