Initializing AMReX (25.12-21-gbd922c6216e0)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-21-gbd922c6216e0) initialized Starting run at 17:52:04 UTC on 2025-12-17. Successfully read inputs file ... Castro git describe: 25.12-13-g470f9c877 AMReX git describe: 25.12-21-gbd922c621 Microphysics git describe: 25.12-9-g15899a4c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014220677 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.335896996 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.333164902 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.310198878 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.306180396 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.353268827 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.298028661 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.28699517 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.286585039 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.287943733 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.288269837 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007499697 seconds Ending run at 17:52:07 UTC on 2025-12-17. Run time = 3.286998998 Run time without initialization = 3.098794906 Average number of zones advanced per microsecond: 0.846 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.2856 ... 3.2863 ... 3.2870 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0842 2.1415 2.2141 67.36% Gravity::make_radial_gravity() 21 0.2793 0.2883 0.3029 9.22% check_for_negative_density() 10 0.02396 0.1011 0.1623 4.94% Castro::estTimeStep() 21 0.03504 0.08396 0.1255 3.82% Castro::initData() 1 0.0349 0.07235 0.1233 3.75% amrex::Copy() 193 0.06336 0.08019 0.09029 2.75% FabArray::ParallelCopy_finish() 41 0.03598 0.04916 0.08884 2.70% FabArray::setVal() 143 0.05423 0.06573 0.0726 2.21% Castro::reset_internal_energy(Fab) 1008 0.04557 0.0473 0.04862 1.48% Castro::normalize_species() 62 0.04188 0.04414 0.04806 1.46% FabArray::ParallelCopy_nowait() 41 0.0347 0.04112 0.04322 1.31% StateData::FillBoundary(geom) 41 0.02755 0.03145 0.03517 1.07% FillPatchIterator::Initialize 41 0.02709 0.03285 0.03475 1.06% Gravity::interpolate_monopole_grav() 21 0.02562 0.02616 0.02699 0.82% Castro::construct_new_gravity_source() 10 0.02245 0.02393 0.02598 0.79% Castro::computeTemp() 63 0.01803 0.01839 0.01872 0.57% Castro::initialize_do_advance() 10 0.01162 0.01682 0.01838 0.56% Castro::initialize_advance() 10 0.005288 0.01058 0.01394 0.42% FabArray::Saxpy() 20 0.01084 0.01244 0.01362 0.41% VisMF::Write(FabArray) 2 0.008665 0.00955 0.01199 0.36% Amr::writePlotFile() 2 0.007021 0.009863 0.01179 0.36% FabArray::setDomainBndry() 41 0.008549 0.01069 0.01178 0.36% MultiFab::contains_nan() 20 0.009244 0.01043 0.01155 0.35% Castro::construct_old_gravity_source() 10 0.007025 0.009585 0.01045 0.32% Castro::initMFs() 1 0.006622 0.007347 0.007715 0.23% Castro::construct_new_source() 50 0.005681 0.006169 0.006354 0.19% main() 1 0.0033 0.003856 0.004341 0.13% Gravity::get_new_grav_vector() 11 0.003085 0.003506 0.003785 0.12% Amr::coarseTimeStep() 10 0.0012 0.002857 0.003462 0.11% Gravity::get_old_grav_vector() 10 0.001519 0.002178 0.002906 0.09% Castro::finalize_do_advance() 10 0.0004922 0.001045 0.001186 0.04% AmrLevel::FillPatch() 41 0.0007186 0.0009322 0.001008 0.03% Amr::timeStep() 10 0.0001317 0.0001849 0.000438 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002645 0.0002812 0.0003148 0.01% Castro::clean_state() 62 0.0001303 0.0001567 0.0001961 0.01% Castro::do_advance_ctu() 10 0.0001452 0.0001602 0.0001745 0.01% StateDataPhysBCFunct::() 41 8.537e-05 0.0001116 0.0001281 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001085 0.0001137 0.0001224 0.00% FabArray::ParallelCopy() 41 8.501e-05 9.1e-05 0.0001006 0.00% Castro::do_old_sources() 10 6.964e-05 8.471e-05 9.295e-05 0.00% Castro::Castro() 1 5.804e-05 7.188e-05 9.174e-05 0.00% FillPatchSingleLevel 41 6.341e-05 7.014e-05 7.998e-05 0.00% Castro::construct_old_source() 50 5.607e-05 6.658e-05 7.494e-05 0.00% Amr::FinalizeInit() 1 4.199e-06 1.331e-05 7.255e-05 0.00% Castro::advance() 10 4.051e-05 4.902e-05 6.728e-05 0.00% Castro::apply_source_to_state() 20 4.826e-05 5.271e-05 6.183e-05 0.00% Castro::do_new_sources() 10 4.821e-05 5.144e-05 6.01e-05 0.00% Castro::subcycle_advance_ctu() 10 4.273e-05 4.737e-05 5.363e-05 0.00% Castro::construct_old_gravity() 10 3.438e-05 3.967e-05 4.878e-05 0.00% Castro::construct_new_gravity() 10 2.905e-05 3.373e-05 4.369e-05 0.00% Castro::expand_state() 10 2.15e-05 2.622e-05 3.247e-05 0.00% Amr::defBaseLevel() 1 2.795e-05 2.94e-05 3.239e-05 0.00% Castro::post_init() 1 1.35e-05 1.772e-05 3.217e-05 0.00% Castro::check_for_nan() 20 2.181e-05 2.331e-05 2.629e-05 0.00% Castro::post_timestep() 10 1.304e-05 1.579e-05 2.007e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.083e-05 1.169e-05 1.372e-05 0.00% Castro::computeNewDt() 9 7.886e-06 8.944e-06 9.787e-06 0.00% Castro::computeInitialDt() 2 5.443e-06 6.531e-06 8.867e-06 0.00% Amr::InitializeInit() 1 5.695e-06 6.075e-06 6.37e-06 0.00% Amr::initialInit() 1 1.419e-06 1.926e-06 2.791e-06 0.00% Amr::init() 1 1.845e-06 2.152e-06 2.706e-06 0.00% Other 264 0.01613 0.01896 0.0218 0.66% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.286 3.286 3.287 100.00% Amr::coarseTimeStep() 10 3.087 3.087 3.087 93.91% Amr::timeStep() 10 3.073 3.073 3.075 93.55% Castro::advance() 10 3.056 3.057 3.057 93.01% Castro::subcycle_advance_ctu() 10 2.98 2.986 2.998 91.22% Castro::do_advance_ctu() 10 2.98 2.986 2.998 91.22% Castro::construct_ctu_hydro_source() 10 2.259 2.263 2.267 68.97% Gravity::make_radial_gravity() 21 0.2955 0.3049 0.3159 9.61% AmrLevel::FillPatch() 41 0.1837 0.199 0.2121 6.45% Gravity::get_new_grav_vector() 11 0.2024 0.2051 0.207 6.30% Castro::construct_old_gravity() 10 0.1759 0.1814 0.1924 5.85% Gravity::get_old_grav_vector() 10 0.175 0.1807 0.1918 5.84% Amr::init() 1 0.1871 0.1876 0.1884 5.73% FillPatchIterator::Initialize 41 0.1539 0.1658 0.1875 5.71% Castro::construct_new_gravity() 10 0.1821 0.1835 0.1847 5.62% Amr::initialInit() 1 0.1726 0.1731 0.1739 5.29% Castro::initialize_do_advance() 10 0.1552 0.1627 0.1664 5.06% check_for_negative_density() 10 0.02396 0.1011 0.1623 4.94% FillPatchIterator::FillFromLevel0() 41 0.1136 0.1222 0.1516 4.61% FillPatchSingleLevel 41 0.1135 0.1221 0.1515 4.61% Amr::InitializeInit() 1 0.05663 0.09409 0.147 4.47% Amr::defBaseLevel() 1 0.05662 0.09408 0.147 4.47% Castro::initData() 1 0.0386 0.07614 0.128 3.89% Castro::estTimeStep() 21 0.03504 0.08396 0.1255 3.82% FabArray::ParallelCopy() 41 0.07812 0.09047 0.1238 3.76% Castro::clean_state() 62 0.1116 0.1155 0.1202 3.66% Castro::expand_state() 10 0.1016 0.1101 0.1178 3.58% Amr::FinalizeInit() 1 0.02557 0.07903 0.1161 3.53% Castro::do_old_sources() 10 0.09206 0.09568 0.09893 3.01% Castro::computeInitialDt() 2 0.00257 0.05566 0.09262 2.82% amrex::Copy() 193 0.06336 0.08019 0.09029 2.75% FabArray::ParallelCopy_finish() 41 0.03598 0.04916 0.08884 2.70% Castro::initialize_advance() 10 0.05465 0.06799 0.07331 2.23% FabArray::setVal() 143 0.05423 0.06573 0.0726 2.21% Castro::do_new_sources() 10 0.0596 0.06324 0.06942 2.11% Castro::computeTemp() 63 0.06391 0.06597 0.06759 2.06% Castro::reset_internal_energy(MultiFab) 63 0.04585 0.04758 0.0489 1.49% Castro::reset_internal_energy(Fab) 1008 0.04557 0.0473 0.04862 1.48% Castro::normalize_species() 62 0.04188 0.04414 0.04806 1.46% FabArray::ParallelCopy_nowait() 41 0.03482 0.04122 0.04331 1.32% StateDataPhysBCFunct::() 41 0.02764 0.03156 0.03529 1.07% StateData::FillBoundary(geom) 41 0.02755 0.03145 0.03517 1.07% Castro::construct_new_source() 50 0.02813 0.0301 0.03219 0.98% Gravity::interpolate_monopole_grav() 21 0.02562 0.02616 0.02699 0.82% Castro::construct_new_gravity_source() 10 0.02245 0.02393 0.02598 0.79% Castro::finalize_do_advance() 10 0.01224 0.01982 0.02443 0.74% Castro::post_init() 1 0.02172 0.02288 0.02321 0.71% Amr::writePlotFile() 2 0.02199 0.02211 0.02248 0.68% Castro::post_timestep() 10 0.01557 0.01622 0.01795 0.55% Castro::apply_source_to_state() 20 0.01089 0.01249 0.01368 0.42% FabArray::Saxpy() 20 0.01084 0.01244 0.01362 0.41% Castro::Castro() 1 0.009573 0.01127 0.01211 0.37% VisMF::Write(FabArray) 2 0.008665 0.00955 0.01199 0.36% FabArray::setDomainBndry() 41 0.008549 0.01069 0.01178 0.36% Castro::check_for_nan() 20 0.009266 0.01046 0.01158 0.35% MultiFab::contains_nan() 20 0.009244 0.01043 0.01155 0.35% Castro::construct_old_source() 50 0.007081 0.009652 0.01052 0.32% Castro::construct_old_gravity_source() 10 0.007025 0.009585 0.01045 0.32% Castro::computeNewDt() 9 0.009522 0.009551 0.009579 0.29% Castro::initMFs() 1 0.006622 0.007347 0.007715 0.23% AmrLevel::AmrLevel(dm) 1 0.005595 0.006107 0.006683 0.20% Other 264 0.02072 0.02447 0.02904 0.88% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8640 KiB 8649 KiB 8653 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6707 KiB 6713 KiB 6716 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7117 KiB 7125 KiB 7127 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4521 KiB 4528 KiB 4549 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 209 KiB 227 KiB 244 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2780 KiB 2783 KiB 2784 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 228 KiB 236 KiB 244 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 42 KiB 58 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2025 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 78 KiB 80 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 70 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-21-gbd922c6216e0) finalized