Initializing AMReX (25.12-21-gbd922c6216e0)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-21-gbd922c6216e0) initialized Starting run at 06:17:53 UTC on 2025-12-17. Successfully read inputs file ... Castro git describe: 25.12-7-ge7fdfa058 AMReX git describe: 25.12-21-gbd922c621 Microphysics git describe: 25.12-9-g15899a4c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014898545 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.328085171 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.347991573 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.316526894 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.317203563 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.364346831 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.315271653 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.302153575 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.30105408 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.302504211 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.296712283 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007512338 seconds Ending run at 06:17:56 UTC on 2025-12-17. Run time = 3.383209374 Run time without initialization = 3.204140583 Average number of zones advanced per microsecond: 0.818 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.3777 ... 3.3810 ... 3.3833 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2121 2.2600 2.3392 69.14% Gravity::make_radial_gravity() 21 0.2788 0.2852 0.2951 8.72% check_for_negative_density() 10 0.01895 0.1018 0.1488 4.40% Castro::estTimeStep() 21 0.02468 0.07169 0.1132 3.35% Castro::initData() 1 0.03467 0.06955 0.1053 3.11% amrex::Copy() 193 0.06476 0.07767 0.08719 2.58% FabArray::ParallelCopy_finish() 41 0.03535 0.04826 0.08404 2.48% FabArray::setVal() 143 0.05503 0.06636 0.0727 2.15% Castro::reset_internal_energy(Fab) 1008 0.04237 0.04638 0.04843 1.43% Castro::normalize_species() 62 0.04148 0.04292 0.0474 1.40% FabArray::ParallelCopy_nowait() 41 0.03558 0.03971 0.04137 1.22% FillPatchIterator::Initialize 41 0.02747 0.03187 0.03439 1.02% StateData::FillBoundary(geom) 41 0.02829 0.03041 0.03206 0.95% Castro::construct_new_gravity_source() 10 0.0228 0.02434 0.02731 0.81% Gravity::interpolate_monopole_grav() 21 0.02568 0.02605 0.02633 0.78% Castro::computeTemp() 63 0.01634 0.01801 0.01862 0.55% Castro::initialize_do_advance() 10 0.0117 0.01612 0.01774 0.52% Castro::initialize_advance() 10 0.005265 0.01085 0.0142 0.42% FabArray::Saxpy() 20 0.0108 0.0125 0.01359 0.40% Amr::writePlotFile() 2 0.007368 0.01032 0.01296 0.38% VisMF::Write(FabArray) 2 0.008468 0.009848 0.01244 0.37% MultiFab::contains_nan() 20 0.009461 0.01042 0.01165 0.34% FabArray::setDomainBndry() 41 0.007729 0.009827 0.01122 0.33% Castro::initMFs() 1 0.00668 0.007961 0.0106 0.31% Castro::construct_old_gravity_source() 10 0.006858 0.009492 0.01019 0.30% StateData::define() 4 0.005417 0.006433 0.008443 0.25% Castro::construct_new_source() 50 0.005816 0.0061 0.006508 0.19% main() 1 0.003807 0.004145 0.004356 0.13% Gravity::get_new_grav_vector() 11 0.002838 0.003404 0.003832 0.11% Amr::coarseTimeStep() 10 0.001421 0.001831 0.002765 0.08% Gravity::get_old_grav_vector() 10 0.001797 0.002082 0.002473 0.07% Castro::finalize_do_advance() 10 0.0005108 0.00104 0.001248 0.04% AmrLevel::FillPatch() 41 0.0006826 0.0009805 0.001162 0.03% Amr::timeStep() 10 0.0001294 0.000184 0.0004562 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002459 0.0002656 0.00028 0.01% Castro::do_advance_ctu() 10 0.0001402 0.0001646 0.0001868 0.01% Castro::clean_state() 62 0.0001301 0.0001502 0.0001663 0.00% StateDataPhysBCFunct::() 41 9.063e-05 0.0001062 0.000146 0.00% FillPatchIterator::FillFromLevel0() 41 9.841e-05 0.0001034 0.0001098 0.00% FabArray::ParallelCopy() 41 8.173e-05 9.163e-05 0.0001026 0.00% Castro::do_old_sources() 10 6.738e-05 8.494e-05 9.886e-05 0.00% FillPatchSingleLevel 41 6.925e-05 7.237e-05 8.022e-05 0.00% Castro::do_new_sources() 10 4.817e-05 5.988e-05 7.595e-05 0.00% Amr::FinalizeInit() 1 3.712e-06 1.309e-05 7.494e-05 0.00% Castro::Castro() 1 5.039e-05 6.315e-05 7.396e-05 0.00% Castro::construct_old_source() 50 4.755e-05 6.016e-05 6.629e-05 0.00% Castro::apply_source_to_state() 20 4.249e-05 4.977e-05 6.043e-05 0.00% Castro::advance() 10 3.668e-05 4.186e-05 6e-05 0.00% Castro::subcycle_advance_ctu() 10 4.087e-05 4.601e-05 4.994e-05 0.00% Castro::construct_old_gravity() 10 3.08e-05 3.886e-05 4.931e-05 0.00% Amr::defBaseLevel() 1 3.572e-05 4.247e-05 4.67e-05 0.00% Castro::construct_new_gravity() 10 2.621e-05 3.375e-05 4.157e-05 0.00% Castro::expand_state() 10 1.911e-05 2.393e-05 3.516e-05 0.00% Castro::check_for_nan() 20 2.014e-05 2.413e-05 3.03e-05 0.00% AmrLevel::AmrLevel(dm) 1 9.813e-06 1.349e-05 2.347e-05 0.00% Castro::post_timestep() 10 1.207e-05 1.56e-05 1.874e-05 0.00% Castro::post_init() 1 1.355e-05 1.486e-05 1.586e-05 0.00% Amr::InitializeInit() 1 5.458e-06 7.167e-06 1.239e-05 0.00% Castro::computeNewDt() 9 8.2e-06 8.754e-06 1.035e-05 0.00% Castro::computeInitialDt() 2 5.536e-06 6.327e-06 7.122e-06 0.00% Amr::init() 1 1.616e-06 2.045e-06 2.786e-06 0.00% Amr::initialInit() 1 1.406e-06 1.858e-06 2.347e-06 0.00% Other 260 0.0103 0.01555 0.01969 0.58% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.378 3.381 3.383 100.00% Amr::coarseTimeStep() 10 3.192 3.192 3.192 94.36% Amr::timeStep() 10 3.179 3.18 3.18 94.00% Castro::advance() 10 3.164 3.164 3.165 93.54% Castro::subcycle_advance_ctu() 10 3.088 3.093 3.106 91.79% Castro::do_advance_ctu() 10 3.088 3.093 3.105 91.79% Castro::construct_ctu_hydro_source() 10 2.379 2.382 2.386 70.53% Gravity::make_radial_gravity() 21 0.2957 0.3012 0.3077 9.09% AmrLevel::FillPatch() 41 0.1784 0.1924 0.2118 6.26% Gravity::get_new_grav_vector() 11 0.1996 0.2019 0.2042 6.03% Castro::construct_old_gravity() 10 0.176 0.1788 0.1857 5.49% FillPatchIterator::Initialize 41 0.1488 0.1605 0.1854 5.48% Gravity::get_old_grav_vector() 10 0.1753 0.1781 0.185 5.47% Castro::construct_new_gravity() 10 0.1791 0.18 0.1813 5.36% Amr::init() 1 0.1734 0.1766 0.1787 5.28% Castro::initialize_do_advance() 10 0.1536 0.1594 0.1664 4.92% Amr::initialInit() 1 0.1578 0.1614 0.1636 4.84% FillPatchIterator::FillFromLevel0() 41 0.1067 0.1188 0.1502 4.44% FillPatchSingleLevel 41 0.1066 0.1187 0.1501 4.44% check_for_negative_density() 10 0.01895 0.1018 0.1488 4.40% Amr::InitializeInit() 1 0.05894 0.0945 0.1321 3.90% Amr::defBaseLevel() 1 0.05894 0.09449 0.1321 3.90% FabArray::ParallelCopy() 41 0.07599 0.08815 0.1198 3.54% Castro::expand_state() 10 0.1016 0.1078 0.1195 3.53% Castro::clean_state() 62 0.1056 0.1128 0.1171 3.46% Castro::estTimeStep() 21 0.02468 0.07169 0.1132 3.35% Castro::initData() 1 0.03819 0.07313 0.1088 3.22% Amr::FinalizeInit() 1 0.02611 0.06693 0.1046 3.09% Castro::do_old_sources() 10 0.08773 0.09242 0.09597 2.84% amrex::Copy() 193 0.06476 0.07767 0.08719 2.58% FabArray::ParallelCopy_finish() 41 0.03535 0.04826 0.08404 2.48% Castro::computeInitialDt() 2 0.00238 0.0432 0.08076 2.39% Castro::initialize_advance() 10 0.05489 0.06842 0.0732 2.16% FabArray::setVal() 143 0.05503 0.06636 0.0727 2.15% Castro::do_new_sources() 10 0.05932 0.06357 0.07005 2.07% Castro::computeTemp() 63 0.05897 0.06465 0.06732 1.99% Castro::reset_internal_energy(MultiFab) 63 0.04264 0.04665 0.0487 1.44% Castro::reset_internal_energy(Fab) 1008 0.04237 0.04638 0.04843 1.43% Castro::normalize_species() 62 0.04148 0.04292 0.0474 1.40% FabArray::ParallelCopy_nowait() 41 0.03567 0.0398 0.04147 1.23% Castro::construct_new_source() 50 0.02871 0.03044 0.03381 1.00% StateDataPhysBCFunct::() 41 0.02843 0.03052 0.03216 0.95% StateData::FillBoundary(geom) 41 0.02829 0.03041 0.03206 0.95% Castro::construct_new_gravity_source() 10 0.0228 0.02434 0.02731 0.81% Gravity::interpolate_monopole_grav() 21 0.02568 0.02605 0.02633 0.78% Castro::finalize_do_advance() 10 0.01428 0.02027 0.02458 0.73% Castro::post_init() 1 0.02317 0.02342 0.02359 0.70% Amr::writePlotFile() 2 0.02265 0.02276 0.02319 0.69% Castro::post_timestep() 10 0.01475 0.01557 0.01651 0.49% Castro::Castro() 1 0.01 0.01161 0.01478 0.44% Castro::apply_source_to_state() 20 0.01084 0.01255 0.01364 0.40% FabArray::Saxpy() 20 0.0108 0.0125 0.01359 0.40% VisMF::Write(FabArray) 2 0.008468 0.009848 0.01244 0.37% Castro::check_for_nan() 20 0.009485 0.01044 0.01168 0.35% MultiFab::contains_nan() 20 0.009461 0.01042 0.01165 0.34% FabArray::setDomainBndry() 41 0.007729 0.009827 0.01122 0.33% Castro::initMFs() 1 0.00668 0.007961 0.0106 0.31% Castro::construct_old_source() 50 0.006906 0.009552 0.01025 0.30% Castro::construct_old_gravity_source() 10 0.006858 0.009492 0.01019 0.30% Castro::computeNewDt() 9 0.009263 0.009278 0.009298 0.27% AmrLevel::AmrLevel(dm) 1 0.005427 0.006446 0.008463 0.25% StateData::define() 4 0.005417 0.006433 0.008443 0.25% Other 260 0.01483 0.02361 0.0302 0.89% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8633 KiB 8640 KiB 8647 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6739 KiB 6747 KiB 6753 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7109 KiB 7118 KiB 7121 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4552 KiB 4559 KiB 4581 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 199 KiB 214 KiB 238 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2796 KiB 2800 KiB 2802 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 222 KiB 226 KiB 231 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 34 KiB 40 KiB 55 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2023 KiB 2024 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 75 KiB 76 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 66 KiB 67 KiB 70 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-21-gbd922c6216e0) finalized