Initializing AMReX (25.12-21-gbd922c6216e0)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-21-gbd922c6216e0) initialized Starting run at 21:22:01 UTC on 2025-12-18. Successfully read inputs file ... Castro git describe: 25.12-7-ge7fdfa058 AMReX git describe: 25.12-21-gbd922c621 Microphysics git describe: 25.12-12-gfcb7c769 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014106413 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.358312939 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.326171658 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.326522591 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.316564632 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.361110048 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.307901319 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.299588131 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.299584301 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.303181436 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.300853514 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.008022415 seconds Ending run at 21:22:04 UTC on 2025-12-18. Run time = 3.394967341 Run time without initialization = 3.21297676 Average number of zones advanced per microsecond: 0.816 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.3904 ... 3.3933 ... 3.3951 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2350 2.2559 2.2716 66.91% Gravity::make_radial_gravity() 21 0.2837 0.2905 0.305 8.98% check_for_negative_density() 10 0.08984 0.1048 0.1176 3.46% Castro::initData() 1 0.03485 0.07466 0.1171 3.45% Castro::estTimeStep() 21 0.03396 0.07112 0.1128 3.32% FabArray::ParallelCopy_finish() 41 0.04187 0.05183 0.09142 2.69% amrex::Copy() 193 0.06841 0.07909 0.0907 2.67% FabArray::setVal() 143 0.0525 0.06437 0.06872 2.02% FabArray::ParallelCopy_nowait() 41 0.03433 0.04073 0.04843 1.43% Castro::normalize_species() 62 0.04267 0.04417 0.04681 1.38% Castro::reset_internal_energy(Fab) 1008 0.04435 0.04574 0.04659 1.37% StateData::FillBoundary(geom) 41 0.02809 0.03113 0.03631 1.07% FillPatchIterator::Initialize 41 0.02743 0.03183 0.03442 1.01% Gravity::interpolate_monopole_grav() 21 0.02567 0.02585 0.02608 0.77% Castro::construct_new_gravity_source() 10 0.0226 0.02406 0.02583 0.76% Castro::computeTemp() 63 0.01721 0.01782 0.01822 0.54% Castro::initialize_do_advance() 10 0.01184 0.01602 0.01767 0.52% FabArray::Saxpy() 20 0.01065 0.01252 0.01366 0.40% Castro::initialize_advance() 10 0.00536 0.01072 0.01321 0.39% Amr::writePlotFile() 2 0.007348 0.01022 0.01227 0.36% VisMF::Write(FabArray) 2 0.008796 0.009583 0.01205 0.35% MultiFab::contains_nan() 20 0.009373 0.01017 0.01105 0.33% Castro::construct_old_gravity_source() 10 0.006768 0.009585 0.01079 0.32% FabArray::setDomainBndry() 41 0.007235 0.009563 0.01076 0.32% Castro::enforce_min_density() 62 0.005552 0.006573 0.01035 0.30% Castro::initMFs() 1 0.006515 0.007896 0.0102 0.30% Castro::construct_new_source() 50 0.005802 0.006244 0.006491 0.19% main() 1 0.003621 0.004105 0.004695 0.14% Gravity::get_new_grav_vector() 11 0.002992 0.003309 0.003557 0.10% Amr::coarseTimeStep() 10 0.001455 0.001945 0.002415 0.07% Gravity::get_old_grav_vector() 10 0.001792 0.002037 0.002405 0.07% Castro::finalize_do_advance() 10 0.0005891 0.0011 0.001267 0.04% AmrLevel::FillPatch() 41 0.0008227 0.000867 0.0009544 0.03% Amr::timeStep() 10 0.000136 0.000179 0.0003779 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000253 0.0002729 0.0003173 0.01% Castro::do_advance_ctu() 10 0.0001579 0.0001732 0.0002032 0.01% Castro::clean_state() 62 0.0001321 0.0001621 0.0001996 0.01% StateDataPhysBCFunct::() 41 9.778e-05 0.0001289 0.0001526 0.00% FillPatchIterator::FillFromLevel0() 41 9.952e-05 0.0001153 0.0001225 0.00% FabArray::ParallelCopy() 41 8.707e-05 9.71e-05 0.0001109 0.00% Castro::do_old_sources() 10 7.752e-05 9.181e-05 0.0001077 0.00% FillPatchSingleLevel 41 7.151e-05 7.755e-05 8.685e-05 0.00% Castro::construct_old_source() 50 4.774e-05 6.743e-05 8.62e-05 0.00% Amr::FinalizeInit() 1 3.779e-06 1.267e-05 7.062e-05 0.00% Castro::Castro() 1 4.915e-05 6.233e-05 7.027e-05 0.00% Castro::advance() 10 3.638e-05 4.545e-05 6.494e-05 0.00% Castro::do_new_sources() 10 5.384e-05 5.945e-05 6.489e-05 0.00% Castro::subcycle_advance_ctu() 10 4.185e-05 5.11e-05 6.158e-05 0.00% Castro::apply_source_to_state() 20 4.745e-05 5.486e-05 6.15e-05 0.00% Amr::defBaseLevel() 1 3.725e-05 4.348e-05 5.201e-05 0.00% Castro::construct_old_gravity() 10 3.025e-05 3.875e-05 4.686e-05 0.00% Castro::construct_new_gravity() 10 3.079e-05 3.449e-05 3.979e-05 0.00% Castro::expand_state() 10 2.272e-05 2.708e-05 3.407e-05 0.00% Castro::check_for_nan() 20 2.213e-05 2.55e-05 2.921e-05 0.00% Castro::post_init() 1 1.366e-05 1.719e-05 2.067e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.88e-06 1.337e-05 2.026e-05 0.00% Castro::post_timestep() 10 1.482e-05 1.637e-05 1.826e-05 0.00% Castro::computeNewDt() 9 7.953e-06 8.805e-06 1.013e-05 0.00% Amr::InitializeInit() 1 6.062e-06 6.815e-06 8.506e-06 0.00% Castro::computeInitialDt() 2 5.483e-06 6.166e-06 7.347e-06 0.00% Amr::init() 1 1.906e-06 2.252e-06 2.766e-06 0.00% Amr::initialInit() 1 1.264e-06 1.83e-06 2.211e-06 0.00% Other 202 0.01032 0.0154 0.02045 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.39 3.393 3.395 100.00% Amr::coarseTimeStep() 10 3.2 3.2 3.2 94.26% Amr::timeStep() 10 3.187 3.187 3.188 93.90% Castro::advance() 10 3.171 3.172 3.172 93.43% Castro::subcycle_advance_ctu() 10 3.098 3.101 3.115 91.75% Castro::do_advance_ctu() 10 3.098 3.1 3.115 91.75% Castro::construct_ctu_hydro_source() 10 2.37 2.381 2.387 70.30% Gravity::make_radial_gravity() 21 0.2995 0.3062 0.3173 9.35% AmrLevel::FillPatch() 41 0.1863 0.1989 0.2187 6.44% Gravity::get_new_grav_vector() 11 0.2052 0.2058 0.2066 6.08% Castro::construct_old_gravity() 10 0.1751 0.1795 0.1894 5.58% FillPatchIterator::Initialize 41 0.1555 0.1656 0.1893 5.58% Gravity::get_old_grav_vector() 10 0.1745 0.1788 0.1887 5.56% Castro::construct_new_gravity() 10 0.183 0.1839 0.1851 5.45% Amr::init() 1 0.178 0.1805 0.1822 5.37% Amr::initialInit() 1 0.1637 0.1661 0.1679 4.95% Castro::initialize_do_advance() 10 0.1519 0.1567 0.1616 4.76% FillPatchIterator::FillFromLevel0() 41 0.1161 0.1242 0.1546 4.55% FillPatchSingleLevel 41 0.116 0.1241 0.1545 4.55% Amr::InitializeInit() 1 0.05654 0.09888 0.1411 4.16% Amr::defBaseLevel() 1 0.05653 0.09887 0.1411 4.16% FabArray::ParallelCopy() 41 0.08334 0.09275 0.126 3.71% Castro::initData() 1 0.03848 0.07825 0.1209 3.56% Castro::clean_state() 62 0.1113 0.1139 0.1177 3.47% check_for_negative_density() 10 0.08984 0.1048 0.1176 3.46% Castro::expand_state() 10 0.1002 0.1056 0.115 3.39% Castro::estTimeStep() 21 0.03396 0.07112 0.1128 3.32% Amr::FinalizeInit() 1 0.02532 0.06721 0.1102 3.24% Castro::do_old_sources() 10 0.09528 0.1015 0.1087 3.20% FabArray::ParallelCopy_finish() 41 0.04187 0.05183 0.09142 2.69% amrex::Copy() 193 0.06841 0.07909 0.0907 2.67% Castro::computeInitialDt() 2 0.002294 0.04375 0.08658 2.55% Castro::initialize_advance() 10 0.0528 0.06784 0.07087 2.09% FabArray::setVal() 143 0.0525 0.06437 0.06872 2.02% Castro::do_new_sources() 10 0.05849 0.06301 0.068 2.00% Castro::computeTemp() 63 0.06184 0.06383 0.06504 1.92% FabArray::ParallelCopy_nowait() 41 0.03445 0.04082 0.04853 1.43% Castro::reset_internal_energy(MultiFab) 63 0.04463 0.04601 0.04686 1.38% Castro::normalize_species() 62 0.04267 0.04417 0.04681 1.38% Castro::reset_internal_energy(Fab) 1008 0.04435 0.04574 0.04659 1.37% StateDataPhysBCFunct::() 41 0.02822 0.03126 0.03646 1.07% StateData::FillBoundary(geom) 41 0.02809 0.03113 0.03631 1.07% Castro::construct_new_source() 50 0.02904 0.0303 0.03232 0.95% Gravity::interpolate_monopole_grav() 21 0.02567 0.02585 0.02608 0.77% Castro::construct_new_gravity_source() 10 0.0226 0.02406 0.02583 0.76% Castro::post_init() 1 0.02283 0.02306 0.02326 0.69% Amr::writePlotFile() 2 0.02236 0.02248 0.02292 0.68% Castro::finalize_do_advance() 10 0.01346 0.01877 0.02255 0.66% Castro::post_timestep() 10 0.01526 0.0156 0.01613 0.47% Castro::Castro() 1 0.0095 0.01152 0.01429 0.42% Castro::apply_source_to_state() 20 0.0107 0.01258 0.01372 0.40% FabArray::Saxpy() 20 0.01065 0.01252 0.01366 0.40% VisMF::Write(FabArray) 2 0.008796 0.009583 0.01205 0.35% Castro::check_for_nan() 20 0.009395 0.01019 0.01108 0.33% MultiFab::contains_nan() 20 0.009373 0.01017 0.01105 0.33% Castro::construct_old_source() 50 0.006816 0.009652 0.01087 0.32% Castro::construct_old_gravity_source() 10 0.006768 0.009585 0.01079 0.32% FabArray::setDomainBndry() 41 0.007235 0.009563 0.01076 0.32% Castro::enforce_min_density() 62 0.005552 0.006573 0.01035 0.30% Castro::initMFs() 1 0.006515 0.007896 0.0102 0.30% Castro::computeNewDt() 9 0.009702 0.009717 0.009732 0.29% AmrLevel::AmrLevel(dm) 1 0.005523 0.006575 0.008379 0.25% Other 202 0.01476 0.02275 0.02994 0.88% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8635 KiB 8641 KiB 8646 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6733 KiB 6740 KiB 6743 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7111 KiB 7119 KiB 7121 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4546 KiB 4553 KiB 4576 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 204 KiB 218 KiB 240 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2793 KiB 2796 KiB 2797 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 224 KiB 229 KiB 238 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 41 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2023 KiB 2024 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 77 KiB 77 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 65 KiB 67 KiB 71 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-21-gbd922c6216e0) finalized