Initializing AMReX (25.12-21-gbd922c6216e0)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-21-gbd922c6216e0) initialized Starting run at 06:17:11 UTC on 2025-12-18. Successfully read inputs file ... Castro git describe: 25.12-7-ge7fdfa058 AMReX git describe: 25.12-21-gbd922c621 Microphysics git describe: 25.12-9-g15899a4c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015854188 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.349269128 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.343603925 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.319971747 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.31755948 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.362791216 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.309229503 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.300448919 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.300775469 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.300134538 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.301526032 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007456327 seconds Ending run at 06:17:15 UTC on 2025-12-18. Run time = 3.383279242 Run time without initialization = 3.217359139 Average number of zones advanced per microsecond: 0.815 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.3824 ... 3.3830 ... 3.3833 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2118 2.2677 2.3315 68.91% Gravity::make_radial_gravity() 21 0.2871 0.2973 0.3108 9.19% check_for_negative_density() 10 0.02573 0.09492 0.1548 4.57% Castro::initData() 1 0.0342 0.0701 0.09978 2.95% Castro::estTimeStep() 21 0.02587 0.05925 0.09828 2.90% amrex::Copy() 193 0.0641 0.07882 0.08611 2.55% FabArray::ParallelCopy_finish() 41 0.03676 0.0478 0.08384 2.48% FabArray::setVal() 143 0.05331 0.0662 0.07112 2.10% Castro::normalize_species() 62 0.04173 0.04496 0.05174 1.53% Castro::reset_internal_energy(Fab) 1008 0.04524 0.04715 0.04917 1.45% FabArray::ParallelCopy_nowait() 41 0.03474 0.04019 0.04171 1.23% FillPatchIterator::Initialize 41 0.02665 0.03183 0.03451 1.02% StateData::FillBoundary(geom) 41 0.02659 0.03081 0.03424 1.01% Gravity::interpolate_monopole_grav() 21 0.02588 0.0263 0.02695 0.80% Castro::construct_new_gravity_source() 10 0.02228 0.02386 0.02613 0.77% Castro::computeTemp() 63 0.01767 0.01839 0.01925 0.57% Castro::initialize_do_advance() 10 0.01136 0.01626 0.0182 0.54% VisMF::Write(FabArray) 2 0.00892 0.00973 0.01368 0.40% Castro::initialize_advance() 10 0.005444 0.01074 0.01344 0.40% FabArray::Saxpy() 20 0.01088 0.01242 0.01328 0.39% MultiFab::contains_nan() 20 0.009171 0.01021 0.01198 0.35% Amr::writePlotFile() 2 0.007798 0.01058 0.01161 0.34% FabArray::setDomainBndry() 41 0.007911 0.00981 0.01114 0.33% Castro::construct_old_gravity_source() 10 0.006899 0.00957 0.01022 0.30% Castro::initMFs() 1 0.006697 0.007156 0.008359 0.25% Castro::construct_new_source() 50 0.005693 0.006206 0.006487 0.19% Castro::enforce_min_density() 62 0.005625 0.005893 0.006321 0.19% main() 1 0.003762 0.003913 0.004046 0.12% Amr::coarseTimeStep() 10 0.001756 0.002889 0.003738 0.11% Gravity::get_new_grav_vector() 11 0.003053 0.003394 0.003737 0.11% Gravity::get_old_grav_vector() 10 0.001507 0.002059 0.002838 0.08% Castro::finalize_do_advance() 10 0.0004899 0.001062 0.00121 0.04% AmrLevel::FillPatch() 41 0.0006557 0.0008659 0.001025 0.03% Amr::timeStep() 10 0.0001231 0.0001675 0.0003514 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002496 0.0002635 0.0002812 0.01% Castro::do_advance_ctu() 10 0.0001419 0.0001625 0.000193 0.01% Castro::clean_state() 62 0.0001346 0.0001475 0.0001637 0.00% StateDataPhysBCFunct::() 41 8.959e-05 0.0001074 0.0001353 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001012 0.0001065 0.0001122 0.00% Castro::do_old_sources() 10 6.949e-05 8.8e-05 0.0001028 0.00% FabArray::ParallelCopy() 41 8.182e-05 8.974e-05 9.533e-05 0.00% FillPatchSingleLevel 41 6.534e-05 7.245e-05 8.441e-05 0.00% Castro::construct_old_source() 50 4.003e-05 6.249e-05 7.567e-05 0.00% Castro::subcycle_advance_ctu() 10 4.248e-05 5.368e-05 7.064e-05 0.00% Castro::Castro() 1 5.103e-05 6.294e-05 6.954e-05 0.00% Amr::FinalizeInit() 1 3.948e-06 1.252e-05 6.471e-05 0.00% Castro::do_new_sources() 10 4.848e-05 5.495e-05 6.419e-05 0.00% Castro::apply_source_to_state() 20 4.002e-05 4.812e-05 5.657e-05 0.00% Amr::defBaseLevel() 1 3.283e-05 4.363e-05 5.058e-05 0.00% Castro::advance() 10 3.371e-05 4.076e-05 4.935e-05 0.00% Castro::construct_old_gravity() 10 3.213e-05 3.596e-05 4.623e-05 0.00% Castro::construct_new_gravity() 10 2.778e-05 3.102e-05 4.024e-05 0.00% Castro::check_for_nan() 20 2.111e-05 2.372e-05 2.849e-05 0.00% Castro::expand_state() 10 2.115e-05 2.377e-05 2.726e-05 0.00% Castro::post_timestep() 10 1.278e-05 1.517e-05 1.871e-05 0.00% Castro::post_init() 1 1.272e-05 1.54e-05 1.852e-05 0.00% Castro::computeNewDt() 9 7.209e-06 8.474e-06 9.486e-06 0.00% Amr::InitializeInit() 1 5.494e-06 6.704e-06 8.724e-06 0.00% Castro::computeInitialDt() 2 5.795e-06 6.548e-06 7.77e-06 0.00% Amr::init() 1 1.591e-06 1.912e-06 2.668e-06 0.00% Amr::initialInit() 1 1.65e-06 1.827e-06 1.947e-06 0.00% Other 203 0.009119 0.01294 0.01523 0.45% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.382 3.383 3.383 100.00% Amr::coarseTimeStep() 10 3.206 3.206 3.206 94.76% Amr::timeStep() 10 3.191 3.192 3.193 94.39% Castro::advance() 10 3.176 3.176 3.177 93.89% Castro::subcycle_advance_ctu() 10 3.1 3.104 3.118 92.17% Castro::do_advance_ctu() 10 3.1 3.104 3.118 92.17% Castro::construct_ctu_hydro_source() 10 2.379 2.384 2.389 70.61% Gravity::make_radial_gravity() 21 0.3022 0.314 0.3244 9.59% Gravity::get_new_grav_vector() 11 0.2068 0.2094 0.2118 6.26% AmrLevel::FillPatch() 41 0.1757 0.1928 0.2059 6.09% Castro::construct_old_gravity() 10 0.1767 0.1844 0.1938 5.73% Gravity::get_old_grav_vector() 10 0.1759 0.1837 0.1932 5.71% Castro::construct_new_gravity() 10 0.1828 0.1848 0.1862 5.50% FillPatchIterator::Initialize 41 0.1465 0.1609 0.1813 5.36% Amr::init() 1 0.1644 0.1654 0.1657 4.90% Castro::initialize_do_advance() 10 0.1509 0.1599 0.1643 4.86% check_for_negative_density() 10 0.02573 0.09492 0.1548 4.57% Amr::initialInit() 1 0.1484 0.15 0.1507 4.45% FillPatchIterator::FillFromLevel0() 41 0.1095 0.1193 0.1456 4.30% FillPatchSingleLevel 41 0.1094 0.1192 0.1455 4.30% Amr::InitializeInit() 1 0.05592 0.09203 0.1216 3.60% Castro::clean_state() 62 0.1112 0.1159 0.1216 3.60% Amr::defBaseLevel() 1 0.05591 0.09203 0.1216 3.59% Castro::expand_state() 10 0.09798 0.108 0.1188 3.51% FabArray::ParallelCopy() 41 0.07857 0.08817 0.1188 3.51% Castro::initData() 1 0.03812 0.07406 0.1038 3.07% Castro::estTimeStep() 21 0.02587 0.05925 0.09828 2.90% Castro::do_old_sources() 10 0.08805 0.09306 0.09685 2.86% Amr::FinalizeInit() 1 0.02895 0.05798 0.0948 2.80% amrex::Copy() 193 0.0641 0.07882 0.08611 2.55% FabArray::ParallelCopy_finish() 41 0.03676 0.0478 0.08384 2.48% Castro::initialize_advance() 10 0.05401 0.06868 0.07333 2.17% FabArray::setVal() 143 0.05331 0.0662 0.07112 2.10% Castro::computeTemp() 63 0.06324 0.06581 0.0687 2.03% Castro::do_new_sources() 10 0.06015 0.06339 0.06849 2.02% Castro::computeInitialDt() 2 0.002502 0.03183 0.06822 2.02% Castro::normalize_species() 62 0.04173 0.04496 0.05174 1.53% Castro::reset_internal_energy(MultiFab) 63 0.0455 0.04742 0.04945 1.46% Castro::reset_internal_energy(Fab) 1008 0.04524 0.04715 0.04917 1.45% FabArray::ParallelCopy_nowait() 41 0.03484 0.04027 0.04179 1.24% StateDataPhysBCFunct::() 41 0.02668 0.03092 0.03438 1.02% StateData::FillBoundary(geom) 41 0.02659 0.03081 0.03424 1.01% Castro::construct_new_source() 50 0.02797 0.03007 0.03262 0.96% Gravity::interpolate_monopole_grav() 21 0.02588 0.0263 0.02695 0.80% Castro::post_init() 1 0.02531 0.02586 0.02627 0.78% Castro::construct_new_gravity_source() 10 0.02228 0.02386 0.02613 0.77% Amr::writePlotFile() 2 0.02239 0.02292 0.02354 0.70% Castro::finalize_do_advance() 10 0.01363 0.01903 0.02272 0.67% Castro::post_timestep() 10 0.01515 0.01584 0.01744 0.52% VisMF::Write(FabArray) 2 0.00892 0.00973 0.01368 0.40% Castro::apply_source_to_state() 20 0.01092 0.01247 0.01333 0.39% FabArray::Saxpy() 20 0.01088 0.01242 0.01328 0.39% Castro::check_for_nan() 20 0.009194 0.01023 0.01201 0.35% MultiFab::contains_nan() 20 0.009171 0.01021 0.01198 0.35% Castro::Castro() 1 0.01088 0.01121 0.01192 0.35% FabArray::setDomainBndry() 41 0.007911 0.00981 0.01114 0.33% Castro::construct_old_source() 50 0.006939 0.009633 0.01029 0.30% Castro::construct_old_gravity_source() 10 0.006899 0.00957 0.01022 0.30% Castro::computeNewDt() 9 0.009447 0.009468 0.009488 0.28% Castro::initMFs() 1 0.006697 0.007156 0.008359 0.25% Castro::enforce_min_density() 62 0.005625 0.005893 0.006321 0.19% Other 203 0.0191 0.02454 0.02832 0.84% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8641 KiB 8653 KiB 8656 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6770 KiB 6773 KiB 6774 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7118 KiB 7126 KiB 7128 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4569 KiB 4575 KiB 4592 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 195 KiB 214 KiB 233 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2807 KiB 2810 KiB 2811 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 227 KiB 236 KiB 244 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 35 KiB 40 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 78 KiB 79 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 66 KiB 69 KiB 73 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-21-gbd922c6216e0) finalized