Initializing AMReX (25.12-23-gb647b95c5835)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-23-gb647b95c5835) initialized Starting run at 06:16:53 UTC on 2025-12-22. Successfully read inputs file ... Castro git describe: 25.12-8-g82f64a11b AMReX git describe: 25.12-23-gb647b95c5 Microphysics git describe: 25.12-12-gfcb7c769 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.013493199 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.345973589 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.342368931 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.335373209 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.317285242 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.369924207 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.309427662 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.297622127 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.297928002 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.300165737 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.299314877 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.006783655 seconds Ending run at 06:16:56 UTC on 2025-12-22. Run time = 3.402514706 Run time without initialization = 3.22697179 Average number of zones advanced per microsecond: 0.812 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.4014 ... 3.4020 ... 3.4025 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2069 2.2598 2.3154 68.05% Gravity::make_radial_gravity() 21 0.2749 0.2841 0.3004 8.83% check_for_negative_density() 10 0.06896 0.1274 0.1798 5.28% Castro::estTimeStep() 21 0.03125 0.07152 0.1152 3.39% Castro::initData() 1 0.03303 0.07291 0.1146 3.37% amrex::Copy() 193 0.06233 0.08004 0.08923 2.62% FabArray::ParallelCopy_finish() 41 0.03584 0.04847 0.08783 2.58% FabArray::setVal() 143 0.0548 0.06489 0.0702 2.06% Castro::reset_internal_energy(Fab) 1008 0.04443 0.04637 0.04766 1.40% Castro::normalize_species() 62 0.04123 0.04192 0.04309 1.27% FabArray::ParallelCopy_nowait() 41 0.03354 0.03977 0.04164 1.22% FillPatchIterator::Initialize 41 0.0269 0.03283 0.03486 1.02% StateData::FillBoundary(geom) 41 0.02824 0.03079 0.03333 0.98% Gravity::interpolate_monopole_grav() 21 0.02563 0.0259 0.02623 0.77% Castro::construct_new_gravity_source() 10 0.02225 0.02339 0.02523 0.74% Castro::computeTemp() 63 0.01705 0.01801 0.01853 0.54% Castro::initialize_do_advance() 10 0.01183 0.01642 0.01808 0.53% FabArray::setDomainBndry() 41 0.008543 0.01164 0.01378 0.41% FabArray::Saxpy() 20 0.01037 0.01239 0.01341 0.39% Castro::initialize_advance() 10 0.005285 0.01037 0.013 0.38% Amr::writePlotFile() 2 0.007141 0.009812 0.01231 0.36% MultiFab::contains_nan() 20 0.009552 0.01001 0.01073 0.32% VisMF::Write(FabArray) 2 0.006845 0.008099 0.01041 0.31% Castro::construct_old_gravity_source() 10 0.006894 0.009383 0.009961 0.29% Castro::initMFs() 1 0.006168 0.006951 0.007486 0.22% Castro::construct_new_source() 50 0.005494 0.006046 0.006259 0.18% main() 1 0.00339 0.003915 0.004413 0.13% Gravity::get_new_grav_vector() 11 0.002715 0.003525 0.003918 0.12% Gravity::get_old_grav_vector() 10 0.001719 0.002206 0.002873 0.08% Amr::coarseTimeStep() 10 0.0006666 0.00122 0.001828 0.05% AmrLevel::FillPatch() 41 0.000756 0.0009535 0.00109 0.03% Castro::finalize_do_advance() 10 0.0005597 0.0009906 0.001084 0.03% Amr::timeStep() 10 0.00013 0.0001825 0.0004291 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002422 0.0002609 0.0002866 0.01% Castro::do_advance_ctu() 10 0.000148 0.0001592 0.000188 0.01% Castro::clean_state() 62 0.0001355 0.0001488 0.0001728 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001072 0.0001157 0.000128 0.00% StateDataPhysBCFunct::() 41 9.577e-05 0.0001073 0.0001209 0.00% Castro::construct_old_source() 50 5.007e-05 6.964e-05 0.0001044 0.00% Castro::do_old_sources() 10 7.388e-05 8.826e-05 9.547e-05 0.00% FabArray::ParallelCopy() 41 8.227e-05 8.858e-05 9.386e-05 0.00% FillPatchSingleLevel 41 6.896e-05 7.709e-05 8.259e-05 0.00% Amr::FinalizeInit() 1 3.203e-06 1.352e-05 8.013e-05 0.00% Castro::Castro() 1 6.127e-05 6.649e-05 7.439e-05 0.00% Castro::apply_source_to_state() 20 4.231e-05 5.266e-05 6.903e-05 0.00% Castro::do_new_sources() 10 5.298e-05 5.988e-05 6.828e-05 0.00% Castro::subcycle_advance_ctu() 10 4.352e-05 5.167e-05 6.618e-05 0.00% Castro::advance() 10 3.548e-05 4.404e-05 6.088e-05 0.00% Amr::defBaseLevel() 1 3.829e-05 4.407e-05 5.467e-05 0.00% Castro::construct_old_gravity() 10 3.216e-05 3.834e-05 4.932e-05 0.00% Castro::construct_new_gravity() 10 2.925e-05 3.358e-05 3.782e-05 0.00% Castro::expand_state() 10 1.891e-05 2.492e-05 3.376e-05 0.00% Castro::post_timestep() 10 1.305e-05 1.68e-05 2.616e-05 0.00% Castro::check_for_nan() 20 2.208e-05 2.391e-05 2.578e-05 0.00% Castro::post_init() 1 1.175e-05 1.346e-05 1.69e-05 0.00% Castro::computeNewDt() 9 9.149e-06 9.997e-06 1.095e-05 0.00% Castro::computeInitialDt() 2 5.591e-06 6.559e-06 8.008e-06 0.00% Amr::InitializeInit() 1 2.441e-06 3.193e-06 6.082e-06 0.00% Amr::init() 1 1.716e-06 2.187e-06 2.845e-06 0.00% Amr::initialInit() 1 1.153e-06 1.587e-06 2.028e-06 0.00% Other 265 0.01547 0.01821 0.02064 0.61% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.401 3.402 3.403 100.00% Amr::coarseTimeStep() 10 3.216 3.216 3.216 94.51% Amr::timeStep() 10 3.204 3.204 3.205 94.18% Castro::advance() 10 3.188 3.189 3.189 93.72% Castro::subcycle_advance_ctu() 10 3.114 3.119 3.132 92.06% Castro::do_advance_ctu() 10 3.114 3.119 3.132 92.06% Castro::construct_ctu_hydro_source() 10 2.405 2.407 2.411 70.84% Gravity::make_radial_gravity() 21 0.2918 0.3007 0.3129 9.20% AmrLevel::FillPatch() 41 0.1852 0.1974 0.2116 6.22% Gravity::get_new_grav_vector() 11 0.2003 0.2013 0.2021 5.94% Castro::construct_old_gravity() 10 0.1739 0.1797 0.1896 5.57% Gravity::get_old_grav_vector() 10 0.1731 0.179 0.189 5.55% FillPatchIterator::Initialize 41 0.1548 0.164 0.187 5.50% Castro::construct_new_gravity() 10 0.1792 0.1797 0.1802 5.30% check_for_negative_density() 10 0.06896 0.1274 0.1798 5.28% Amr::init() 1 0.1747 0.1752 0.1758 5.17% Castro::initialize_do_advance() 10 0.1568 0.1619 0.1652 4.86% Amr::initialInit() 1 0.1606 0.1615 0.1622 4.77% FillPatchIterator::FillFromLevel0() 41 0.1106 0.1195 0.1508 4.43% FillPatchSingleLevel 41 0.1105 0.1194 0.1507 4.43% Amr::InitializeInit() 1 0.05227 0.09339 0.1357 3.99% Amr::defBaseLevel() 1 0.05227 0.09338 0.1357 3.99% FabArray::ParallelCopy() 41 0.07694 0.08842 0.1216 3.57% Castro::expand_state() 10 0.1049 0.11 0.1188 3.49% Castro::initData() 1 0.03663 0.07652 0.118 3.47% Castro::estTimeStep() 21 0.03125 0.07152 0.1152 3.39% Castro::clean_state() 62 0.1094 0.1118 0.1134 3.33% Amr::FinalizeInit() 1 0.0249 0.06807 0.1098 3.23% Castro::do_old_sources() 10 0.08902 0.09402 0.09649 2.84% amrex::Copy() 193 0.06233 0.08004 0.08923 2.62% FabArray::ParallelCopy_finish() 41 0.03584 0.04847 0.08783 2.58% Castro::computeInitialDt() 2 0.002229 0.04496 0.08665 2.55% Castro::initialize_advance() 10 0.05257 0.06638 0.07099 2.09% FabArray::setVal() 143 0.0548 0.06489 0.0702 2.06% Castro::do_new_sources() 10 0.05905 0.06239 0.06733 1.98% Castro::computeTemp() 63 0.06175 0.06464 0.06645 1.95% Castro::reset_internal_energy(MultiFab) 63 0.0447 0.04663 0.04792 1.41% Castro::reset_internal_energy(Fab) 1008 0.04443 0.04637 0.04766 1.40% Castro::normalize_species() 62 0.04123 0.04192 0.04309 1.27% FabArray::ParallelCopy_nowait() 41 0.03366 0.03987 0.04172 1.23% StateDataPhysBCFunct::() 41 0.02834 0.0309 0.03344 0.98% StateData::FillBoundary(geom) 41 0.02824 0.03079 0.03333 0.98% Castro::construct_new_source() 50 0.02775 0.02944 0.03123 0.92% Gravity::interpolate_monopole_grav() 21 0.02563 0.0259 0.02623 0.77% Castro::construct_new_gravity_source() 10 0.02225 0.02339 0.02523 0.74% Castro::post_init() 1 0.02255 0.02278 0.02288 0.67% Castro::finalize_do_advance() 10 0.01308 0.01824 0.02154 0.63% Amr::writePlotFile() 2 0.02047 0.02057 0.02101 0.62% Castro::post_timestep() 10 0.01462 0.01537 0.01595 0.47% FabArray::setDomainBndry() 41 0.008543 0.01164 0.01378 0.41% Castro::apply_source_to_state() 20 0.01041 0.01244 0.01347 0.40% FabArray::Saxpy() 20 0.01037 0.01239 0.01341 0.39% Castro::Castro() 1 0.00925 0.01061 0.01152 0.34% Castro::check_for_nan() 20 0.009578 0.01003 0.01075 0.32% MultiFab::contains_nan() 20 0.009552 0.01001 0.01073 0.32% VisMF::Write(FabArray) 2 0.006845 0.008099 0.01041 0.31% Castro::construct_old_source() 50 0.006944 0.009452 0.01007 0.30% Castro::construct_old_gravity_source() 10 0.006894 0.009383 0.009961 0.29% Castro::computeNewDt() 9 0.009313 0.009325 0.009339 0.27% Castro::initMFs() 1 0.006168 0.006951 0.007486 0.22% Other 265 0.02518 0.02916 0.03281 0.96% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8644 KiB 8654 KiB 8658 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6749 KiB 6755 KiB 6759 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7119 KiB 7127 KiB 7129 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4565 KiB 4571 KiB 4592 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 205 KiB 218 KiB 236 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 12 KiB 14 KiB 18 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2802 KiB 2805 KiB 2806 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 218 KiB 224 KiB 234 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 34 KiB 39 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2026 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 75 KiB 75 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 65 KiB 67 KiB 71 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-23-gb647b95c5835) finalized