Initializing AMReX (25.12-25-g10b67a795031)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-25-g10b67a795031) initialized Starting run at 06:34:03 UTC on 2025-12-23. Successfully read inputs file ... Castro git describe: 25.12-10-g53019e1f0 AMReX git describe: 25.12-25-g10b67a795 Microphysics git describe: 25.12-13-g277b76e4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014324061 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.344735468 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.348365999 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.321307343 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.320179638 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.383791256 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.308691345 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.299192585 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.299936549 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.29957841 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.299922954 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00756803 seconds Ending run at 06:34:07 UTC on 2025-12-23. Run time = 3.400708591 Run time without initialization = 3.238701252 Average number of zones advanced per microsecond: 0.809 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.3995 ... 3.4002 ... 3.4008 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1939 2.2699 2.3501 69.11% Gravity::make_radial_gravity() 21 0.283 0.2923 0.3125 9.19% check_for_negative_density() 10 0.02228 0.1054 0.1854 5.45% FabArray::ParallelCopy_finish() 41 0.03615 0.06153 0.105 3.09% Castro::initData() 1 0.03991 0.07043 0.1 2.94% amrex::Copy() 193 0.06218 0.08282 0.09741 2.86% Castro::estTimeStep() 21 0.02284 0.05893 0.0913 2.68% FabArray::setVal() 143 0.0519 0.06627 0.07386 2.17% Castro::reset_internal_energy(Fab) 1008 0.04418 0.04556 0.04874 1.43% FabArray::ParallelCopy_nowait() 41 0.03498 0.04047 0.04217 1.24% Castro::normalize_species() 62 0.03607 0.03688 0.03775 1.11% FillPatchIterator::Initialize 41 0.02744 0.03334 0.03623 1.07% StateData::FillBoundary(geom) 41 0.02666 0.03111 0.03437 1.01% Gravity::interpolate_monopole_grav() 21 0.02547 0.0264 0.02835 0.83% Castro::construct_new_gravity_source() 10 0.02247 0.02363 0.0266 0.78% Castro::computeTemp() 63 0.01753 0.01797 0.01871 0.55% Castro::initialize_do_advance() 10 0.01127 0.01668 0.01786 0.53% MultiFab::contains_nan() 20 0.009346 0.01102 0.0144 0.42% Castro::initialize_advance() 10 0.00531 0.01065 0.01402 0.41% FabArray::Saxpy() 20 0.01071 0.01226 0.01344 0.40% VisMF::Write(FabArray) 2 0.009071 0.009789 0.01283 0.38% FabArray::setDomainBndry() 41 0.00891 0.01054 0.01139 0.33% Amr::writePlotFile() 2 0.007143 0.009323 0.009989 0.29% Castro::construct_old_gravity_source() 10 0.006678 0.008915 0.009434 0.28% Castro::initMFs() 1 0.006665 0.007125 0.008343 0.25% Castro::construct_new_source() 50 0.00546 0.0061 0.00635 0.19% main() 1 0.004164 0.004283 0.004473 0.13% Gravity::get_new_grav_vector() 11 0.002786 0.003524 0.003953 0.12% Gravity::get_old_grav_vector() 10 0.001544 0.002169 0.002867 0.08% Amr::coarseTimeStep() 10 0.001147 0.002044 0.002473 0.07% Castro::finalize_do_advance() 10 0.000564 0.001148 0.001257 0.04% AmrLevel::FillPatch() 41 0.0008586 0.0009466 0.001092 0.03% Amr::timeStep() 10 0.0001343 0.0001744 0.0003841 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002552 0.0002709 0.0002917 0.01% Castro::do_advance_ctu() 10 0.0001396 0.0001706 0.0002075 0.01% Castro::clean_state() 62 0.0001383 0.0001538 0.000175 0.01% Castro::Castro() 1 5.488e-05 8.762e-05 0.000135 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001013 0.0001124 0.0001293 0.00% StateDataPhysBCFunct::() 41 9.054e-05 0.0001103 0.0001225 0.00% FabArray::ParallelCopy() 41 7.905e-05 9.183e-05 0.0001033 0.00% Castro::do_old_sources() 10 6.378e-05 8.289e-05 9.418e-05 0.00% Amr::FinalizeInit() 1 3.94e-06 1.418e-05 8.083e-05 0.00% FillPatchSingleLevel 41 6.802e-05 7.189e-05 7.845e-05 0.00% Castro::construct_old_source() 50 4.025e-05 6.375e-05 7.798e-05 0.00% Castro::do_new_sources() 10 5.122e-05 6.211e-05 7.063e-05 0.00% Castro::subcycle_advance_ctu() 10 4.345e-05 5.187e-05 5.812e-05 0.00% Castro::apply_source_to_state() 20 4.093e-05 4.834e-05 5.627e-05 0.00% Castro::advance() 10 3.523e-05 4.299e-05 5.485e-05 0.00% Castro::construct_old_gravity() 10 3.382e-05 3.967e-05 5.11e-05 0.00% Amr::defBaseLevel() 1 3.484e-05 4.179e-05 4.907e-05 0.00% Castro::check_for_nan() 20 2.405e-05 2.831e-05 4.186e-05 0.00% Castro::construct_new_gravity() 10 2.658e-05 3.376e-05 4.021e-05 0.00% Castro::expand_state() 10 1.878e-05 2.674e-05 3.02e-05 0.00% Castro::post_init() 1 1.416e-05 1.828e-05 2.311e-05 0.00% Castro::post_timestep() 10 1.398e-05 1.596e-05 1.905e-05 0.00% Castro::computeNewDt() 9 8.719e-06 9.215e-06 1.004e-05 0.00% Amr::InitializeInit() 1 5.328e-06 6.613e-06 9.691e-06 0.00% Castro::computeInitialDt() 2 4.991e-06 6.511e-06 8.197e-06 0.00% Amr::initialInit() 1 1.625e-06 1.947e-06 2.584e-06 0.00% Amr::init() 1 2.015e-06 2.184e-06 2.524e-06 0.00% Other 265 0.01488 0.01889 0.02111 0.62% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.399 3.4 3.401 100.00% Amr::coarseTimeStep() 10 3.227 3.227 3.227 94.88% Amr::timeStep() 10 3.214 3.214 3.215 94.54% Castro::advance() 10 3.199 3.2 3.2 94.10% Castro::subcycle_advance_ctu() 10 3.125 3.13 3.146 92.50% Castro::do_advance_ctu() 10 3.125 3.13 3.146 92.50% Castro::construct_ctu_hydro_source() 10 2.392 2.395 2.399 70.54% Gravity::make_radial_gravity() 21 0.299 0.3092 0.3256 9.58% AmrLevel::FillPatch() 41 0.1893 0.2107 0.2275 6.69% Gravity::get_new_grav_vector() 11 0.2044 0.2055 0.207 6.09% Castro::construct_old_gravity() 10 0.1835 0.1904 0.2041 6.00% FillPatchIterator::Initialize 41 0.155 0.1775 0.2037 5.99% Gravity::get_old_grav_vector() 10 0.1827 0.1897 0.2036 5.99% check_for_negative_density() 10 0.02228 0.1054 0.1854 5.45% Castro::construct_new_gravity() 10 0.1829 0.1835 0.1844 5.42% FillPatchIterator::FillFromLevel0() 41 0.1081 0.1336 0.1671 4.92% FillPatchSingleLevel 41 0.108 0.1335 0.167 4.91% Castro::initialize_do_advance() 10 0.1542 0.1612 0.1651 4.85% Amr::init() 1 0.1603 0.1612 0.1617 4.75% Amr::initialInit() 1 0.1458 0.1471 0.1477 4.34% FabArray::ParallelCopy() 41 0.07724 0.1022 0.1402 4.12% Amr::InitializeInit() 1 0.06192 0.09198 0.1214 3.57% Amr::defBaseLevel() 1 0.06191 0.09197 0.1214 3.57% Castro::expand_state() 10 0.102 0.1096 0.1185 3.48% Castro::clean_state() 62 0.1033 0.106 0.1108 3.26% FabArray::ParallelCopy_finish() 41 0.03615 0.06153 0.105 3.09% Castro::initData() 1 0.04339 0.07405 0.104 3.06% Castro::do_old_sources() 10 0.09194 0.1011 0.1035 3.04% amrex::Copy() 193 0.06218 0.08282 0.09741 2.86% Castro::estTimeStep() 21 0.02284 0.05893 0.0913 2.68% Amr::FinalizeInit() 1 0.0257 0.0551 0.08472 2.49% FabArray::setVal() 143 0.0519 0.06627 0.07386 2.17% Castro::initialize_advance() 10 0.05006 0.06664 0.07131 2.10% Castro::do_new_sources() 10 0.05736 0.06172 0.0681 2.00% Castro::computeTemp() 63 0.06202 0.0638 0.06774 1.99% Castro::computeInitialDt() 2 0.00227 0.03162 0.06113 1.80% Castro::reset_internal_energy(MultiFab) 63 0.04446 0.04584 0.04903 1.44% Castro::reset_internal_energy(Fab) 1008 0.04418 0.04556 0.04874 1.43% FabArray::ParallelCopy_nowait() 41 0.03509 0.04056 0.04225 1.24% Castro::normalize_species() 62 0.03607 0.03688 0.03775 1.11% StateDataPhysBCFunct::() 41 0.02675 0.03122 0.03449 1.01% StateData::FillBoundary(geom) 41 0.02666 0.03111 0.03437 1.01% Castro::construct_new_source() 50 0.02808 0.02973 0.03295 0.97% Gravity::interpolate_monopole_grav() 21 0.02547 0.0264 0.02835 0.83% Castro::construct_new_gravity_source() 10 0.02247 0.02363 0.0266 0.78% Castro::finalize_do_advance() 10 0.01209 0.01906 0.02341 0.69% Castro::post_init() 1 0.02277 0.02319 0.02332 0.69% Amr::writePlotFile() 2 0.02165 0.02178 0.02214 0.65% Castro::post_timestep() 10 0.01388 0.01427 0.01491 0.44% Castro::check_for_nan() 20 0.009373 0.01104 0.01444 0.42% MultiFab::contains_nan() 20 0.009346 0.01102 0.0144 0.42% Castro::apply_source_to_state() 20 0.01075 0.01231 0.01349 0.40% FabArray::Saxpy() 20 0.01071 0.01226 0.01344 0.40% VisMF::Write(FabArray) 2 0.009071 0.009789 0.01283 0.38% Castro::Castro() 1 0.01046 0.01115 0.01205 0.35% FabArray::setDomainBndry() 41 0.00891 0.01054 0.01139 0.33% Castro::construct_old_source() 50 0.006718 0.008979 0.009512 0.28% Castro::construct_old_gravity_source() 10 0.006678 0.008915 0.009434 0.28% Castro::computeNewDt() 9 0.009401 0.009411 0.009422 0.28% Castro::initMFs() 1 0.006665 0.007125 0.008343 0.25% Other 265 0.02485 0.03033 0.03367 0.99% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8641 KiB 8652 KiB 8654 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6780 KiB 6783 KiB 6784 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7118 KiB 7126 KiB 7127 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4583 KiB 4589 KiB 4609 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 207 KiB 227 KiB 246 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2813 KiB 2817 KiB 2817 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 223 KiB 231 KiB 243 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 34 KiB 43 KiB 61 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 77 KiB 77 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 71 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-25-g10b67a795031) finalized