Initializing AMReX (25.12-25-g10b67a795031)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-25-g10b67a795031) initialized Starting run at 06:17:09 UTC on 2025-12-24. Successfully read inputs file ... Castro git describe: 25.12-10-g53019e1f0 AMReX git describe: 25.12-25-g10b67a795 Microphysics git describe: 25.12-13-g277b76e4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015254847 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.346391453 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.338276013 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.346711761 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.393811443 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.354153996 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.301709155 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.298225419 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.302801901 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.299956583 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.300182462 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007542084 seconds Ending run at 06:17:12 UTC on 2025-12-24. Run time = 3.462772262 Run time without initialization = 3.295133165 Average number of zones advanced per microsecond: 0.796 Average number of zones advanced per microsecond per rank: 0.099 TinyProfiler total time across processes [min...avg...max]: 3.4586 ... 3.4615 ... 3.4635 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2217 2.2595 2.3408 67.58% Gravity::make_radial_gravity() 21 0.301 0.3105 0.3168 9.15% check_for_negative_density() 10 0.06755 0.1497 0.1906 5.50% Castro::estTimeStep() 21 0.02634 0.05964 0.1012 2.92% Castro::initData() 1 0.03303 0.07057 0.09949 2.87% FabArray::ParallelCopy_finish() 41 0.04527 0.0613 0.08631 2.49% amrex::Copy() 193 0.07042 0.07919 0.08621 2.49% FabArray::setVal() 143 0.06216 0.07078 0.08271 2.39% Castro::reset_internal_energy(Fab) 1008 0.04505 0.04649 0.04814 1.39% FabArray::ParallelCopy_nowait() 41 0.03437 0.04007 0.04205 1.21% Castro::normalize_species() 62 0.03701 0.03828 0.03986 1.15% FillPatchIterator::Initialize 41 0.02791 0.03287 0.03474 1.00% StateData::FillBoundary(geom) 41 0.02899 0.03118 0.03327 0.96% Castro::construct_new_gravity_source() 10 0.0212 0.02447 0.02739 0.79% Gravity::interpolate_monopole_grav() 21 0.02581 0.02618 0.02665 0.77% Castro::initialize_do_advance() 10 0.01142 0.01771 0.02096 0.61% Castro::computeTemp() 63 0.01798 0.01835 0.01892 0.55% Castro::initialize_advance() 10 0.009774 0.01145 0.01321 0.38% MultiFab::contains_nan() 20 0.009212 0.01023 0.01281 0.37% FabArray::Saxpy() 20 0.01053 0.01177 0.01253 0.36% VisMF::Write(FabArray) 2 0.009419 0.009921 0.01243 0.36% FabArray::setDomainBndry() 41 0.007676 0.01017 0.01114 0.32% Castro::initMFs() 1 0.006425 0.007596 0.01087 0.31% Amr::writePlotFile() 2 0.007456 0.0101 0.01069 0.31% Castro::construct_old_gravity_source() 10 0.006358 0.00881 0.009512 0.27% StateData::define() 4 0.005242 0.006163 0.008453 0.24% Castro::construct_new_source() 50 0.005483 0.005787 0.00594 0.17% Gravity::get_new_grav_vector() 11 0.003201 0.00434 0.005848 0.17% main() 1 0.003542 0.004428 0.004862 0.14% Amr::coarseTimeStep() 10 0.001696 0.002205 0.003442 0.10% Gravity::get_old_grav_vector() 10 0.001785 0.002055 0.002348 0.07% Castro::finalize_do_advance() 10 0.0005871 0.001061 0.001245 0.04% AmrLevel::FillPatch() 41 0.0008748 0.00103 0.001101 0.03% Amr::timeStep() 10 0.0001264 0.0001804 0.0004152 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002532 0.0002674 0.0002924 0.01% Castro::clean_state() 62 0.0001488 0.0001686 0.0001962 0.01% Castro::do_advance_ctu() 10 0.0001379 0.0001651 0.000186 0.01% StateDataPhysBCFunct::() 41 0.0001011 0.0001154 0.0001533 0.00% FillPatchIterator::FillFromLevel0() 41 9.892e-05 0.0001105 0.0001216 0.00% Amr::FinalizeInit() 1 4.477e-06 1.711e-05 0.0001018 0.00% Castro::do_old_sources() 10 7.315e-05 8.41e-05 9.731e-05 0.00% FabArray::ParallelCopy() 41 8.146e-05 8.92e-05 9.669e-05 0.00% Castro::Castro() 1 5.405e-05 7.731e-05 8.979e-05 0.00% FillPatchSingleLevel 41 6.474e-05 7.135e-05 7.717e-05 0.00% Castro::construct_old_source() 50 5.108e-05 6.17e-05 7.144e-05 0.00% Castro::do_new_sources() 10 5.144e-05 5.54e-05 6.125e-05 0.00% Castro::subcycle_advance_ctu() 10 4.641e-05 5.267e-05 6.111e-05 0.00% Castro::apply_source_to_state() 20 3.898e-05 4.629e-05 5.937e-05 0.00% Amr::defBaseLevel() 1 3.604e-05 4.404e-05 5.829e-05 0.00% Castro::advance() 10 3.454e-05 4.068e-05 4.577e-05 0.00% Castro::construct_old_gravity() 10 2.906e-05 3.527e-05 4.299e-05 0.00% Castro::construct_new_gravity() 10 2.976e-05 3.419e-05 3.762e-05 0.00% Castro::check_for_nan() 20 2.372e-05 2.576e-05 2.811e-05 0.00% Castro::expand_state() 10 1.774e-05 2.264e-05 2.602e-05 0.00% AmrLevel::AmrLevel(dm) 1 9.326e-06 1.333e-05 2.21e-05 0.00% Castro::post_init() 1 1.553e-05 1.725e-05 1.968e-05 0.00% Castro::post_timestep() 10 1.342e-05 1.542e-05 1.847e-05 0.00% Amr::InitializeInit() 1 5.07e-06 6.993e-06 1.335e-05 0.00% Castro::computeNewDt() 9 8.98e-06 9.768e-06 1.052e-05 0.00% Castro::computeInitialDt() 2 5.539e-06 7.194e-06 8.762e-06 0.00% Amr::init() 1 1.695e-06 2.297e-06 2.913e-06 0.00% Amr::initialInit() 1 1.58e-06 1.999e-06 2.518e-06 0.00% Other 260 0.0106 0.01572 0.01918 0.55% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.459 3.462 3.463 100.00% Amr::coarseTimeStep() 10 3.283 3.283 3.283 94.78% Amr::timeStep() 10 3.269 3.27 3.27 94.42% Castro::advance() 10 3.254 3.255 3.256 94.00% Castro::subcycle_advance_ctu() 10 3.172 3.18 3.185 91.95% Castro::do_advance_ctu() 10 3.171 3.179 3.185 91.95% Castro::construct_ctu_hydro_source() 10 2.427 2.43 2.432 70.23% Gravity::make_radial_gravity() 21 0.3182 0.3272 0.3315 9.57% Gravity::get_new_grav_vector() 11 0.2162 0.2184 0.2203 6.36% AmrLevel::FillPatch() 41 0.1984 0.2081 0.2181 6.30% Castro::construct_old_gravity() 10 0.1904 0.1937 0.1959 5.66% Gravity::get_old_grav_vector() 10 0.1897 0.193 0.1953 5.64% Castro::construct_new_gravity() 10 0.1916 0.1932 0.195 5.63% check_for_negative_density() 10 0.06755 0.1497 0.1906 5.50% FillPatchIterator::Initialize 41 0.1644 0.1761 0.1869 5.40% Castro::initialize_do_advance() 10 0.1622 0.1697 0.174 5.02% Amr::init() 1 0.1634 0.1664 0.168 4.85% Amr::initialInit() 1 0.1479 0.1511 0.1527 4.41% FillPatchIterator::FillFromLevel0() 41 0.1195 0.133 0.1513 4.37% FillPatchSingleLevel 41 0.1194 0.1329 0.1512 4.37% Castro::expand_state() 10 0.1085 0.1176 0.1264 3.65% Amr::InitializeInit() 1 0.05626 0.09507 0.1236 3.57% Amr::defBaseLevel() 1 0.05626 0.09506 0.1236 3.57% FabArray::ParallelCopy() 41 0.08595 0.1016 0.1209 3.49% Castro::clean_state() 62 0.106 0.1087 0.1124 3.25% Castro::initData() 1 0.0366 0.07417 0.1032 2.98% Castro::estTimeStep() 21 0.02634 0.05964 0.1012 2.92% Castro::do_old_sources() 10 0.08989 0.09215 0.09641 2.78% Amr::FinalizeInit() 1 0.02907 0.05606 0.09558 2.76% FabArray::ParallelCopy_finish() 41 0.04527 0.0613 0.08631 2.49% amrex::Copy() 193 0.07042 0.07919 0.08621 2.49% FabArray::setVal() 143 0.06216 0.07078 0.08271 2.39% Castro::initialize_advance() 10 0.06661 0.07177 0.07982 2.30% Castro::do_new_sources() 10 0.05377 0.06316 0.07093 2.05% Castro::computeInitialDt() 2 0.002322 0.02932 0.06875 1.99% Castro::computeTemp() 63 0.06329 0.0651 0.06724 1.94% Castro::reset_internal_energy(MultiFab) 63 0.04531 0.04675 0.04841 1.40% Castro::reset_internal_energy(Fab) 1008 0.04505 0.04649 0.04814 1.39% FabArray::ParallelCopy_nowait() 41 0.03447 0.04016 0.04213 1.22% Castro::normalize_species() 62 0.03701 0.03828 0.03986 1.15% StateDataPhysBCFunct::() 41 0.02909 0.03129 0.03338 0.96% StateData::FillBoundary(geom) 41 0.02899 0.03118 0.03327 0.96% Castro::construct_new_source() 50 0.02669 0.03026 0.03314 0.96% Castro::finalize_do_advance() 10 0.0132 0.02178 0.03045 0.88% Castro::construct_new_gravity_source() 10 0.0212 0.02447 0.02739 0.79% Gravity::interpolate_monopole_grav() 21 0.02581 0.02618 0.02665 0.77% Castro::post_init() 1 0.02619 0.02637 0.02657 0.77% Amr::writePlotFile() 2 0.02264 0.02294 0.02314 0.67% Castro::post_timestep() 10 0.01417 0.01471 0.01523 0.44% Castro::Castro() 1 0.0103 0.01158 0.01506 0.43% Castro::check_for_nan() 20 0.009238 0.01026 0.01284 0.37% MultiFab::contains_nan() 20 0.009212 0.01023 0.01281 0.37% Castro::apply_source_to_state() 20 0.01057 0.01182 0.01257 0.36% FabArray::Saxpy() 20 0.01053 0.01177 0.01253 0.36% VisMF::Write(FabArray) 2 0.009419 0.009921 0.01243 0.36% FabArray::setDomainBndry() 41 0.007676 0.01017 0.01114 0.32% Castro::initMFs() 1 0.006425 0.007596 0.01087 0.31% Castro::computeNewDt() 9 0.009602 0.009617 0.009632 0.28% Castro::construct_old_source() 50 0.006409 0.008872 0.009578 0.28% Castro::construct_old_gravity_source() 10 0.006358 0.00881 0.009512 0.27% AmrLevel::AmrLevel(dm) 1 0.005253 0.006176 0.008475 0.24% StateData::define() 4 0.005242 0.006163 0.008453 0.24% Other 260 0.01513 0.0239 0.02988 0.86% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8636 KiB 8644 KiB 8650 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6770 KiB 6776 KiB 6779 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7112 KiB 7119 KiB 7123 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4568 KiB 4579 KiB 4586 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 213 KiB 226 KiB 237 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2810 KiB 2814 KiB 2816 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 233 KiB 240 KiB 243 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 45 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2023 KiB 2024 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 80 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 70 KiB 71 KiB 72 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-25-g10b67a795031) finalized