Initializing AMReX (25.12-25-g10b67a795031)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-25-g10b67a795031) initialized Starting run at 06:17:19 UTC on 2025-12-25. Successfully read inputs file ... Castro git describe: 25.12-10-g53019e1f0 AMReX git describe: 25.12-25-g10b67a795 Microphysics git describe: 25.12-13-g277b76e4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014832833 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.359758954 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.341598912 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.338757436 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.326746898 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.381703827 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.305138862 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.29912366 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.298653848 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.298572896 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.298951213 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007652906 seconds Ending run at 06:17:23 UTC on 2025-12-25. Run time = 3.424567217 Run time without initialization = 3.262048173 Average number of zones advanced per microsecond: 0.804 Average number of zones advanced per microsecond per rank: 0.100 TinyProfiler total time across processes [min...avg...max]: 3.4234 ... 3.4241 ... 3.4247 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2216 2.2596 2.3134 67.55% Gravity::make_radial_gravity() 21 0.2816 0.3 0.3122 9.12% check_for_negative_density() 10 0.04501 0.1013 0.1392 4.06% Castro::initData() 1 0.03311 0.06744 0.09949 2.91% Castro::estTimeStep() 21 0.02966 0.06238 0.09865 2.88% amrex::Copy() 193 0.08098 0.08633 0.09481 2.77% FabArray::setVal() 143 0.06687 0.07334 0.08658 2.53% FabArray::ParallelCopy_finish() 41 0.05599 0.06905 0.07699 2.25% Castro::reset_internal_energy(Fab) 1008 0.04382 0.04699 0.05709 1.67% FabArray::ParallelCopy_nowait() 41 0.03708 0.0409 0.04204 1.23% Castro::normalize_species() 62 0.03644 0.03753 0.03841 1.12% FillPatchIterator::Initialize 41 0.02932 0.03409 0.03639 1.06% StateData::FillBoundary(geom) 41 0.02793 0.03171 0.03539 1.03% Gravity::interpolate_monopole_grav() 21 0.02594 0.02627 0.02663 0.78% Castro::construct_new_gravity_source() 10 0.02279 0.02365 0.02452 0.72% Castro::computeTemp() 63 0.01771 0.01895 0.02352 0.69% Castro::initialize_do_advance() 10 0.01602 0.01797 0.02019 0.59% FabArray::Saxpy() 20 0.01187 0.01335 0.0177 0.52% Castro::initialize_advance() 10 0.01046 0.01325 0.01664 0.49% FabArray::setDomainBndry() 41 0.007957 0.01101 0.01395 0.41% MultiFab::contains_nan() 20 0.009682 0.01099 0.0133 0.39% VisMF::Write(FabArray) 2 0.009205 0.009791 0.01226 0.36% Amr::writePlotFile() 2 0.007256 0.01003 0.01066 0.31% Castro::construct_old_gravity_source() 10 0.008706 0.009228 0.009559 0.28% Castro::initMFs() 1 0.006506 0.006794 0.008312 0.24% Castro::construct_new_source() 50 0.00616 0.006314 0.006463 0.19% main() 1 0.003851 0.004284 0.004771 0.14% Gravity::get_old_grav_vector() 10 0.001656 0.002636 0.004349 0.13% Gravity::get_new_grav_vector() 11 0.003084 0.003609 0.003918 0.11% Amr::coarseTimeStep() 10 0.001176 0.001895 0.002572 0.08% Castro::finalize_do_advance() 10 0.001221 0.001297 0.001414 0.04% AmrLevel::FillPatch() 41 0.00117 0.001284 0.001393 0.04% Amr::timeStep() 10 0.0001387 0.0001933 0.0004364 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002609 0.0002803 0.000354 0.01% Castro::do_advance_ctu() 10 0.0001464 0.0001702 0.000183 0.01% Castro::clean_state() 62 0.0001555 0.000167 0.0001796 0.01% StateDataPhysBCFunct::() 41 0.0001056 0.0001162 0.0001407 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001068 0.000121 0.0001349 0.00% Castro::Castro() 1 6.106e-05 9.604e-05 0.0001128 0.00% Castro::do_old_sources() 10 7.602e-05 8.769e-05 0.0001027 0.00% FabArray::ParallelCopy() 41 8.737e-05 9.326e-05 0.0001016 0.00% Castro::subcycle_advance_ctu() 10 4.652e-05 5.86e-05 8.966e-05 0.00% FillPatchSingleLevel 41 7.011e-05 7.692e-05 8.515e-05 0.00% Amr::FinalizeInit() 1 4.282e-06 1.48e-05 8.415e-05 0.00% Castro::construct_old_gravity() 10 3.359e-05 5.072e-05 7.936e-05 0.00% Castro::construct_old_source() 50 5.74e-05 6.694e-05 7.402e-05 0.00% Castro::do_new_sources() 10 5.795e-05 6.422e-05 7.287e-05 0.00% Castro::apply_source_to_state() 20 4.509e-05 5.294e-05 6.46e-05 0.00% Castro::construct_new_gravity() 10 3.205e-05 3.732e-05 5.319e-05 0.00% Castro::advance() 10 3.545e-05 4.201e-05 4.824e-05 0.00% Amr::defBaseLevel() 1 3.614e-05 4.075e-05 4.565e-05 0.00% Castro::check_for_nan() 20 2.51e-05 2.999e-05 4.125e-05 0.00% Castro::expand_state() 10 2.149e-05 2.579e-05 3.036e-05 0.00% Castro::post_init() 1 1.397e-05 1.739e-05 2.097e-05 0.00% Castro::post_timestep() 10 1.393e-05 1.662e-05 2.097e-05 0.00% Castro::computeNewDt() 9 8.259e-06 9.636e-06 1.051e-05 0.00% Amr::InitializeInit() 1 4.942e-06 6.164e-06 9.901e-06 0.00% Castro::computeInitialDt() 2 5.584e-06 7.108e-06 7.894e-06 0.00% Amr::init() 1 1.694e-06 2.429e-06 3.376e-06 0.00% Amr::initialInit() 1 1.447e-06 1.874e-06 2.392e-06 0.00% Other 265 0.01613 0.01888 0.02076 0.61% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.423 3.424 3.425 100.00% Amr::coarseTimeStep() 10 3.25 3.25 3.25 94.89% Amr::timeStep() 10 3.237 3.237 3.238 94.55% Castro::advance() 10 3.222 3.223 3.223 94.11% Castro::subcycle_advance_ctu() 10 3.134 3.146 3.151 92.01% Castro::do_advance_ctu() 10 3.134 3.146 3.151 92.01% Castro::construct_ctu_hydro_source() 10 2.378 2.381 2.384 69.62% Gravity::make_radial_gravity() 21 0.2992 0.3173 0.3277 9.57% AmrLevel::FillPatch() 41 0.1967 0.222 0.2387 6.97% Castro::construct_old_gravity() 10 0.1844 0.1988 0.2079 6.07% Gravity::get_old_grav_vector() 10 0.1832 0.1979 0.2067 6.04% Gravity::get_new_grav_vector() 11 0.2013 0.2033 0.2045 5.97% FillPatchIterator::Initialize 41 0.1664 0.1873 0.2016 5.89% Castro::initialize_do_advance() 10 0.1628 0.1838 0.1993 5.82% Castro::construct_new_gravity() 10 0.1794 0.1805 0.1816 5.30% Amr::init() 1 0.1614 0.1621 0.1623 4.74% FillPatchIterator::FillFromLevel0() 41 0.1272 0.1422 0.1537 4.49% FillPatchSingleLevel 41 0.127 0.142 0.1535 4.48% Amr::initialInit() 1 0.1462 0.1471 0.1473 4.30% check_for_negative_density() 10 0.04501 0.1013 0.1392 4.06% Castro::expand_state() 10 0.1078 0.1282 0.1359 3.97% Amr::InitializeInit() 1 0.05414 0.08865 0.1207 3.52% Amr::defBaseLevel() 1 0.05413 0.08864 0.1207 3.52% Castro::clean_state() 62 0.1056 0.1092 0.1198 3.50% FabArray::ParallelCopy() 41 0.09713 0.1101 0.119 3.48% Castro::do_old_sources() 10 0.08953 0.09982 0.104 3.04% Castro::initData() 1 0.0369 0.07113 0.1033 3.02% Castro::estTimeStep() 21 0.02966 0.06238 0.09865 2.88% amrex::Copy() 193 0.08098 0.08633 0.09481 2.77% Amr::FinalizeInit() 1 0.02649 0.05844 0.09316 2.72% FabArray::setVal() 143 0.06687 0.07334 0.08658 2.53% Castro::initialize_advance() 10 0.06779 0.07347 0.08518 2.49% Castro::computeTemp() 63 0.06321 0.06622 0.07721 2.25% FabArray::ParallelCopy_finish() 41 0.05599 0.06905 0.07699 2.25% Castro::computeInitialDt() 2 0.002335 0.03428 0.06898 2.01% Castro::do_new_sources() 10 0.06021 0.06354 0.06591 1.92% Castro::reset_internal_energy(MultiFab) 63 0.04409 0.04727 0.05745 1.68% Castro::reset_internal_energy(Fab) 1008 0.04382 0.04699 0.05709 1.67% FabArray::ParallelCopy_nowait() 41 0.03718 0.041 0.04213 1.23% Castro::normalize_species() 62 0.03644 0.03753 0.03841 1.12% StateDataPhysBCFunct::() 41 0.02804 0.03183 0.03552 1.04% StateData::FillBoundary(geom) 41 0.02793 0.03171 0.03539 1.03% Castro::construct_new_source() 50 0.02895 0.02997 0.03098 0.90% Gravity::interpolate_monopole_grav() 21 0.02594 0.02627 0.02663 0.78% Castro::construct_new_gravity_source() 10 0.02279 0.02365 0.02452 0.72% Castro::finalize_do_advance() 10 0.0173 0.02016 0.02431 0.71% Castro::post_init() 1 0.0237 0.02384 0.02398 0.70% Amr::writePlotFile() 2 0.02273 0.02281 0.02292 0.67% Castro::apply_source_to_state() 20 0.01192 0.01341 0.01776 0.52% FabArray::Saxpy() 20 0.01187 0.01335 0.0177 0.52% Castro::post_timestep() 10 0.01408 0.01458 0.01494 0.44% FabArray::setDomainBndry() 41 0.007957 0.01101 0.01395 0.41% Castro::check_for_nan() 20 0.009709 0.01102 0.01334 0.39% MultiFab::contains_nan() 20 0.009682 0.01099 0.0133 0.39% VisMF::Write(FabArray) 2 0.009205 0.009791 0.01226 0.36% Castro::Castro() 1 0.01072 0.01103 0.01188 0.35% Castro::construct_old_source() 50 0.008763 0.009295 0.009624 0.28% Castro::construct_old_gravity_source() 10 0.008706 0.009228 0.009559 0.28% Castro::computeNewDt() 9 0.009231 0.009254 0.00927 0.27% Castro::initMFs() 1 0.006506 0.006794 0.008312 0.24% Other 265 0.02598 0.03027 0.03321 0.97% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 2 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8645 KiB 8654 KiB 8656 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6778 KiB 6783 KiB 6784 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7118 KiB 7126 KiB 7128 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4564 KiB 4580 KiB 4589 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 215 KiB 247 KiB 265 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2814 KiB 2817 KiB 2818 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 222 KiB 235 KiB 243 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 42 KiB 51 KiB 54 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 75 KiB 76 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 74 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-25-g10b67a795031) finalized