Initializing AMReX (25.12-25-g10b67a795031)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-25-g10b67a795031) initialized Starting run at 06:17:15 UTC on 2025-12-26. Successfully read inputs file ... Castro git describe: 25.12-10-g53019e1f0 AMReX git describe: 25.12-25-g10b67a795 Microphysics git describe: 25.12-13-g277b76e4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015905657 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.345129223 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.344070501 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.357407584 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.3657709 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.328891811 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.29782982 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.296741013 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.297976824 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.29856403 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.29943533 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007584638 seconds Ending run at 06:17:19 UTC on 2025-12-26. Run time = 3.438484651 Run time without initialization = 3.244720846 Average number of zones advanced per microsecond: 0.808 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.4342 ... 3.4370 ... 3.4385 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1729 2.2596 2.3215 67.51% Gravity::make_radial_gravity() 21 0.289 0.3001 0.3157 9.18% check_for_negative_density() 10 0.04815 0.111 0.2012 5.85% Castro::estTimeStep() 21 0.02673 0.08424 0.1312 3.82% Castro::initData() 1 0.03483 0.07213 0.1191 3.46% amrex::Copy() 193 0.07318 0.08089 0.08707 2.53% FabArray::setVal() 143 0.06291 0.07253 0.08481 2.47% FabArray::ParallelCopy_finish() 41 0.03622 0.05176 0.05875 1.71% Castro::reset_internal_energy(Fab) 1008 0.04392 0.0459 0.04775 1.39% FabArray::ParallelCopy_nowait() 41 0.03678 0.04099 0.04755 1.38% Castro::normalize_species() 62 0.0368 0.03766 0.03876 1.13% FillPatchIterator::Initialize 41 0.02939 0.0338 0.03668 1.07% StateData::FillBoundary(geom) 41 0.02635 0.0311 0.03407 0.99% Castro::construct_new_gravity_source() 10 0.02202 0.02511 0.02802 0.81% Gravity::interpolate_monopole_grav() 21 0.02569 0.02606 0.02691 0.78% Castro::initialize_do_advance() 10 0.01516 0.01804 0.02177 0.63% Castro::computeTemp() 63 0.01765 0.01812 0.01873 0.54% FabArray::Saxpy() 20 0.01208 0.01267 0.01451 0.42% Castro::initialize_advance() 10 0.009605 0.01142 0.01341 0.39% FabArray::setDomainBndry() 41 0.008448 0.01091 0.01314 0.38% VisMF::Write(FabArray) 2 0.009319 0.009922 0.01292 0.38% Amr::writePlotFile() 2 0.007962 0.01121 0.01193 0.35% MultiFab::contains_nan() 20 0.009334 0.01008 0.01107 0.32% Castro::initMFs() 1 0.006426 0.007711 0.01055 0.31% Castro::construct_old_gravity_source() 10 0.007745 0.009251 0.009666 0.28% StateData::define() 4 0.005304 0.006347 0.008775 0.26% Castro::construct_new_source() 50 0.005838 0.005981 0.006166 0.18% Gravity::get_new_grav_vector() 11 0.003163 0.004272 0.005895 0.17% main() 1 0.003641 0.004221 0.004633 0.13% Amr::coarseTimeStep() 10 0.001397 0.002124 0.003101 0.09% Gravity::get_old_grav_vector() 10 0.001571 0.002057 0.002423 0.07% Castro::finalize_do_advance() 10 0.001268 0.001307 0.00136 0.04% AmrLevel::FillPatch() 41 0.000844 0.0009585 0.001147 0.03% Amr::timeStep() 10 0.0001367 0.000183 0.0004507 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002602 0.0002726 0.0002838 0.01% Castro::do_advance_ctu() 10 0.0001539 0.0001755 0.0002084 0.01% Castro::clean_state() 62 0.0001376 0.00016 0.000185 0.01% FillPatchIterator::FillFromLevel0() 41 9.733e-05 0.0001147 0.0001339 0.00% StateDataPhysBCFunct::() 41 8.83e-05 0.0001076 0.0001209 0.00% Castro::do_old_sources() 10 8.271e-05 9.2e-05 0.0001041 0.00% FabArray::ParallelCopy() 41 8.362e-05 9.014e-05 0.0001009 0.00% FillPatchSingleLevel 41 6.527e-05 7.491e-05 8.48e-05 0.00% Castro::Castro() 1 5.374e-05 6.698e-05 8.414e-05 0.00% Amr::FinalizeInit() 1 4.025e-06 1.387e-05 8.091e-05 0.00% Castro::construct_old_source() 50 5.909e-05 6.615e-05 7.42e-05 0.00% Castro::do_new_sources() 10 4.941e-05 5.914e-05 6.549e-05 0.00% Castro::subcycle_advance_ctu() 10 4.608e-05 5.505e-05 6.312e-05 0.00% Castro::apply_source_to_state() 20 4.503e-05 5.057e-05 5.813e-05 0.00% Amr::defBaseLevel() 1 3.469e-05 4.588e-05 5.301e-05 0.00% Castro::construct_old_gravity() 10 3.288e-05 4.067e-05 4.969e-05 0.00% Castro::advance() 10 3.442e-05 4.03e-05 4.741e-05 0.00% Castro::construct_new_gravity() 10 3.392e-05 3.65e-05 4.043e-05 0.00% Castro::check_for_nan() 20 2.406e-05 2.716e-05 3.248e-05 0.00% Castro::expand_state() 10 2.178e-05 2.493e-05 2.944e-05 0.00% Castro::post_timestep() 10 1.315e-05 1.61e-05 2.134e-05 0.00% AmrLevel::AmrLevel(dm) 1 9.309e-06 1.336e-05 2.034e-05 0.00% Castro::post_init() 1 1.497e-05 1.63e-05 1.829e-05 0.00% Castro::computeNewDt() 9 8.344e-06 9.778e-06 1.103e-05 0.00% Castro::computeInitialDt() 2 5.843e-06 7.223e-06 8.605e-06 0.00% Amr::InitializeInit() 1 5.088e-06 6.668e-06 7.743e-06 0.00% Amr::init() 1 1.808e-06 2.706e-06 6.645e-06 0.00% Amr::initialInit() 1 1.617e-06 2.056e-06 3.007e-06 0.00% Other 260 0.01102 0.01555 0.01829 0.53% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.434 3.437 3.438 100.00% Amr::coarseTimeStep() 10 3.233 3.233 3.233 94.01% Amr::timeStep() 10 3.219 3.22 3.221 93.66% Castro::advance() 10 3.204 3.205 3.206 93.23% Castro::subcycle_advance_ctu() 10 3.12 3.129 3.136 91.20% Castro::do_advance_ctu() 10 3.12 3.129 3.136 91.20% Castro::construct_ctu_hydro_source() 10 2.389 2.391 2.394 69.61% Gravity::make_radial_gravity() 21 0.3058 0.3168 0.3301 9.60% Gravity::get_new_grav_vector() 11 0.2159 0.219 0.2206 6.42% AmrLevel::FillPatch() 41 0.1844 0.2022 0.2181 6.34% check_for_negative_density() 10 0.04815 0.111 0.2012 5.85% Castro::construct_new_gravity() 10 0.1919 0.1943 0.1956 5.69% Amr::init() 1 0.1894 0.1922 0.1935 5.63% Castro::construct_old_gravity() 10 0.1751 0.1804 0.1907 5.55% Gravity::get_old_grav_vector() 10 0.1744 0.1797 0.1896 5.51% FillPatchIterator::Initialize 41 0.1581 0.169 0.1816 5.28% Castro::initialize_do_advance() 10 0.1504 0.1672 0.1793 5.21% Amr::initialInit() 1 0.1731 0.1759 0.1772 5.15% Amr::InitializeInit() 1 0.05828 0.09613 0.1446 4.21% Amr::defBaseLevel() 1 0.05828 0.09612 0.1446 4.21% FillPatchIterator::FillFromLevel0() 41 0.1123 0.1243 0.1352 3.93% FillPatchSingleLevel 41 0.1122 0.1242 0.1351 3.93% Castro::estTimeStep() 21 0.02673 0.08424 0.1312 3.82% Castro::expand_state() 10 0.1012 0.1153 0.1294 3.76% Castro::initData() 1 0.03792 0.07556 0.1226 3.56% Amr::FinalizeInit() 1 0.02851 0.07974 0.1182 3.44% Castro::clean_state() 62 0.1048 0.1073 0.1096 3.19% FabArray::ParallelCopy() 41 0.07796 0.09293 0.1013 2.95% Castro::do_old_sources() 10 0.08819 0.09121 0.0936 2.72% Castro::computeInitialDt() 2 0.002484 0.05379 0.09243 2.69% amrex::Copy() 193 0.07318 0.08089 0.08707 2.53% FabArray::setVal() 143 0.06291 0.07253 0.08481 2.47% Castro::initialize_advance() 10 0.06545 0.07235 0.08158 2.37% Castro::do_new_sources() 10 0.05825 0.06627 0.07346 2.14% Castro::computeTemp() 63 0.06184 0.06429 0.06675 1.94% FabArray::ParallelCopy_finish() 41 0.03622 0.05176 0.05875 1.71% Castro::reset_internal_energy(MultiFab) 63 0.04419 0.04617 0.04802 1.40% Castro::reset_internal_energy(Fab) 1008 0.04392 0.0459 0.04775 1.39% FabArray::ParallelCopy_nowait() 41 0.03691 0.04109 0.04763 1.39% Castro::normalize_species() 62 0.0368 0.03766 0.03876 1.13% StateDataPhysBCFunct::() 41 0.02645 0.03121 0.03419 0.99% Castro::construct_new_source() 50 0.02801 0.03109 0.03413 0.99% StateData::FillBoundary(geom) 41 0.02635 0.0311 0.03407 0.99% Castro::finalize_do_advance() 10 0.01525 0.02253 0.03081 0.90% Castro::construct_new_gravity_source() 10 0.02202 0.02511 0.02802 0.81% Gravity::interpolate_monopole_grav() 21 0.02569 0.02606 0.02691 0.78% Castro::post_init() 1 0.02556 0.02579 0.02598 0.76% Amr::writePlotFile() 2 0.02373 0.02404 0.02437 0.71% Castro::post_timestep() 10 0.0143 0.01452 0.01516 0.44% Castro::apply_source_to_state() 20 0.01213 0.01272 0.01456 0.42% FabArray::Saxpy() 20 0.01208 0.01267 0.01451 0.42% Castro::Castro() 1 0.009821 0.01128 0.01428 0.42% FabArray::setDomainBndry() 41 0.008448 0.01091 0.01314 0.38% VisMF::Write(FabArray) 2 0.009319 0.009922 0.01292 0.38% Castro::check_for_nan() 20 0.009361 0.0101 0.0111 0.32% MultiFab::contains_nan() 20 0.009334 0.01008 0.01107 0.32% Castro::initMFs() 1 0.006426 0.007711 0.01055 0.31% Castro::construct_old_source() 50 0.007808 0.009317 0.009737 0.28% Castro::construct_old_gravity_source() 10 0.007745 0.009251 0.009666 0.28% Castro::computeNewDt() 9 0.009235 0.009246 0.009259 0.27% AmrLevel::AmrLevel(dm) 1 0.005317 0.00636 0.008795 0.26% StateData::define() 4 0.005304 0.006347 0.008775 0.26% Other 260 0.01539 0.02361 0.02865 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 2 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8633 KiB 8643 KiB 8648 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6714 KiB 6720 KiB 6722 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7112 KiB 7120 KiB 7122 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4524 KiB 4538 KiB 4549 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 200 KiB 222 KiB 244 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2788 KiB 2790 KiB 2791 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 226 KiB 234 KiB 243 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 34 KiB 42 KiB 47 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2023 KiB 2024 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 81 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 65 KiB 67 KiB 70 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-25-g10b67a795031) finalized