Initializing AMReX (25.12-26-g53dc0a470c5d)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-26-g53dc0a470c5d) initialized Starting run at 06:17:23 UTC on 2025-12-30. Successfully read inputs file ... Castro git describe: 25.12-10-g53019e1f0 AMReX git describe: 25.12-26-g53dc0a470 Microphysics git describe: 25.12-13-g277b76e4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01508783 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.352499812 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.346323631 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.320429351 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.329843246 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.385991331 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.303479751 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.298226133 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.29809648 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.299410933 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.299895989 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007987407 seconds Ending run at 06:17:27 UTC on 2025-12-30. Run time = 3.429922091 Run time without initialization = 3.247035348 Average number of zones advanced per microsecond: 0.807 Average number of zones advanced per microsecond per rank: 0.101 TinyProfiler total time across processes [min...avg...max]: 3.4288 ... 3.4296 ... 3.4301 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2202 2.2454 2.2916 66.81% Gravity::make_radial_gravity() 21 0.2925 0.2977 0.3037 8.86% check_for_negative_density() 10 0.04762 0.09607 0.1232 3.59% Castro::estTimeStep() 21 0.03364 0.08439 0.1197 3.49% Castro::initData() 1 0.03383 0.07078 0.1176 3.43% amrex::Copy() 193 0.07942 0.08527 0.09103 2.65% FabArray::setVal() 143 0.06449 0.07346 0.08732 2.55% FabArray::ParallelCopy_finish() 41 0.05195 0.0738 0.08673 2.53% Castro::reset_internal_energy(Fab) 1008 0.04325 0.04673 0.05488 1.60% FabArray::ParallelCopy_nowait() 41 0.03906 0.04103 0.04225 1.23% FillPatchIterator::Initialize 41 0.02942 0.03496 0.0393 1.15% Castro::normalize_species() 62 0.03694 0.03755 0.03815 1.11% StateData::FillBoundary(geom) 41 0.02854 0.03151 0.0341 0.99% Gravity::interpolate_monopole_grav() 21 0.02591 0.02633 0.02673 0.78% Castro::construct_new_gravity_source() 10 0.02263 0.02396 0.02495 0.73% Castro::initialize_do_advance() 10 0.01589 0.01862 0.02319 0.68% Castro::computeTemp() 63 0.01751 0.01816 0.01928 0.56% Castro::initialize_advance() 10 0.009932 0.01199 0.01416 0.41% FabArray::Saxpy() 20 0.01205 0.01281 0.01361 0.40% MultiFab::contains_nan() 20 0.009375 0.01052 0.01316 0.38% VisMF::Write(FabArray) 2 0.009339 0.00991 0.01244 0.36% FabArray::setDomainBndry() 41 0.00856 0.01074 0.01164 0.34% Amr::writePlotFile() 2 0.007728 0.0105 0.0111 0.32% Castro::construct_old_gravity_source() 10 0.009184 0.009519 0.009879 0.29% Castro::initMFs() 1 0.006597 0.006998 0.008525 0.25% Castro::construct_new_source() 50 0.005754 0.006198 0.006459 0.19% main() 1 0.003702 0.004098 0.004382 0.13% Gravity::get_new_grav_vector() 11 0.003234 0.003624 0.003925 0.11% Gravity::get_old_grav_vector() 10 0.001754 0.002205 0.002648 0.08% Amr::coarseTimeStep() 10 0.001015 0.001395 0.002053 0.06% Castro::finalize_do_advance() 10 0.001282 0.001338 0.001519 0.04% AmrLevel::FillPatch() 41 0.0009292 0.001045 0.001236 0.04% Amr::timeStep() 10 0.0001539 0.0002214 0.0004744 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002656 0.0002925 0.0003638 0.01% Castro::do_advance_ctu() 10 0.0001595 0.0001725 0.000196 0.01% Castro::clean_state() 62 0.0001425 0.0001538 0.0001658 0.00% StateDataPhysBCFunct::() 41 9.521e-05 0.0001147 0.0001443 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001038 0.0001121 0.0001202 0.00% Castro::do_old_sources() 10 8.815e-05 9.501e-05 0.0001146 0.00% Castro::Castro() 1 6.01e-05 8.543e-05 0.0001139 0.00% Castro::construct_old_source() 50 6.108e-05 7.141e-05 9.59e-05 0.00% FabArray::ParallelCopy() 41 8.141e-05 8.723e-05 8.957e-05 0.00% FillPatchSingleLevel 41 6.788e-05 7.518e-05 8.831e-05 0.00% Amr::FinalizeInit() 1 4.248e-06 1.551e-05 8.785e-05 0.00% Castro::do_new_sources() 10 5.743e-05 6.429e-05 7.649e-05 0.00% Castro::apply_source_to_state() 20 4.485e-05 5.276e-05 6.826e-05 0.00% Castro::subcycle_advance_ctu() 10 4.356e-05 5.148e-05 5.686e-05 0.00% Castro::construct_old_gravity() 10 3.856e-05 4.238e-05 5.344e-05 0.00% Amr::defBaseLevel() 1 3.601e-05 4.071e-05 4.747e-05 0.00% Castro::construct_new_gravity() 10 3.328e-05 3.797e-05 4.489e-05 0.00% Castro::advance() 10 4.07e-05 4.293e-05 4.453e-05 0.00% Castro::computeNewDt() 9 9.807e-06 1.759e-05 3.848e-05 0.00% Castro::check_for_nan() 20 2.419e-05 2.863e-05 3.512e-05 0.00% Castro::expand_state() 10 2.256e-05 2.543e-05 3.062e-05 0.00% Castro::post_init() 1 1.461e-05 1.681e-05 2.055e-05 0.00% Castro::post_timestep() 10 1.37e-05 1.624e-05 1.858e-05 0.00% Castro::computeInitialDt() 2 6.384e-06 7.363e-06 8.576e-06 0.00% Amr::InitializeInit() 1 5.351e-06 5.922e-06 6.74e-06 0.00% Amr::init() 1 1.485e-06 2.264e-06 3.092e-06 0.00% Amr::initialInit() 1 1.452e-06 2.147e-06 2.667e-06 0.00% Other 265 0.01617 0.01897 0.02088 0.61% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.429 3.43 3.43 100.00% Amr::coarseTimeStep() 10 3.235 3.235 3.235 94.31% Amr::timeStep() 10 3.215 3.216 3.216 93.76% Castro::advance() 10 3.2 3.201 3.201 93.32% Castro::subcycle_advance_ctu() 10 3.114 3.124 3.13 91.25% Castro::do_advance_ctu() 10 3.114 3.124 3.13 91.24% Castro::construct_ctu_hydro_source() 10 2.358 2.361 2.364 68.91% Gravity::make_radial_gravity() 21 0.3099 0.3151 0.32 9.33% AmrLevel::FillPatch() 41 0.2136 0.2266 0.2467 7.19% FillPatchIterator::Initialize 41 0.1773 0.1925 0.2099 6.12% Gravity::get_new_grav_vector() 11 0.2062 0.2076 0.2085 6.08% Castro::construct_old_gravity() 10 0.1873 0.1935 0.1986 5.79% Gravity::get_old_grav_vector() 10 0.1866 0.1926 0.1979 5.77% Castro::initialize_do_advance() 10 0.1754 0.1856 0.1966 5.73% Castro::construct_new_gravity() 10 0.1834 0.184 0.1846 5.38% Amr::init() 1 0.1818 0.1824 0.1827 5.33% Amr::initialInit() 1 0.1664 0.1671 0.1674 4.88% FillPatchIterator::FillFromLevel0() 41 0.1267 0.1468 0.1632 4.76% FillPatchSingleLevel 41 0.1266 0.1467 0.1631 4.75% Castro::expand_state() 10 0.1193 0.1311 0.145 4.23% Amr::InitializeInit() 1 0.05516 0.09193 0.139 4.05% Amr::defBaseLevel() 1 0.05516 0.09192 0.139 4.05% FabArray::ParallelCopy() 41 0.09331 0.115 0.1292 3.77% check_for_negative_density() 10 0.04762 0.09607 0.1232 3.59% Castro::initData() 1 0.03746 0.07442 0.1207 3.52% Castro::estTimeStep() 21 0.03364 0.08439 0.1197 3.49% Castro::clean_state() 62 0.1043 0.1082 0.1178 3.44% Amr::FinalizeInit() 1 0.0274 0.07514 0.1122 3.27% Castro::do_old_sources() 10 0.09277 0.1006 0.1053 3.07% amrex::Copy() 193 0.07942 0.08527 0.09103 2.65% FabArray::setVal() 143 0.06449 0.07346 0.08732 2.55% Castro::computeInitialDt() 2 0.002396 0.0501 0.08713 2.54% FabArray::ParallelCopy_finish() 41 0.05195 0.0738 0.08673 2.53% Castro::initialize_advance() 10 0.06753 0.07292 0.08376 2.44% Castro::computeTemp() 63 0.06105 0.06518 0.07452 2.17% Castro::do_new_sources() 10 0.05954 0.06299 0.06588 1.92% Castro::reset_internal_energy(MultiFab) 63 0.04354 0.04702 0.05524 1.61% Castro::reset_internal_energy(Fab) 1008 0.04325 0.04673 0.05488 1.60% FabArray::ParallelCopy_nowait() 41 0.03918 0.04112 0.04234 1.23% Castro::normalize_species() 62 0.03694 0.03755 0.03815 1.11% StateDataPhysBCFunct::() 41 0.02867 0.03162 0.03422 1.00% StateData::FillBoundary(geom) 41 0.02854 0.03151 0.0341 0.99% Castro::construct_new_source() 50 0.02878 0.03016 0.03127 0.91% Gravity::interpolate_monopole_grav() 21 0.02591 0.02633 0.02673 0.78% Castro::construct_new_gravity_source() 10 0.02263 0.02396 0.02495 0.73% Castro::post_init() 1 0.02455 0.02471 0.02481 0.72% Amr::writePlotFile() 2 0.0233 0.02339 0.02347 0.68% Castro::finalize_do_advance() 10 0.0161 0.01902 0.02265 0.66% Castro::computeNewDt() 9 0.01658 0.01663 0.01675 0.49% Castro::post_timestep() 10 0.01385 0.01454 0.01507 0.44% Castro::apply_source_to_state() 20 0.0121 0.01286 0.01366 0.40% FabArray::Saxpy() 20 0.01205 0.01281 0.01361 0.40% Castro::check_for_nan() 20 0.009402 0.01055 0.01319 0.38% MultiFab::contains_nan() 20 0.009375 0.01052 0.01316 0.38% VisMF::Write(FabArray) 2 0.009339 0.00991 0.01244 0.36% Castro::Castro() 1 0.01037 0.01101 0.01206 0.35% FabArray::setDomainBndry() 41 0.00856 0.01074 0.01164 0.34% Castro::construct_old_source() 50 0.009251 0.00959 0.009943 0.29% Castro::construct_old_gravity_source() 10 0.009184 0.009519 0.009879 0.29% Castro::initMFs() 1 0.006597 0.006998 0.008525 0.25% Other 265 0.02624 0.03031 0.0332 0.97% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8646 KiB 8654 KiB 8657 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6736 KiB 6742 KiB 6743 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7120 KiB 7127 KiB 7129 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4527 KiB 4542 KiB 4550 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 234 KiB 252 KiB 277 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2791 KiB 2793 KiB 2794 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 229 KiB 233 KiB 237 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 41 KiB 53 KiB 60 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2024 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 77 KiB 77 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 72 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-26-g53dc0a470c5d) finalized