Initializing AMReX (25.12-26-g53dc0a470c5d)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-26-g53dc0a470c5d) initialized Starting run at 06:17:30 UTC on 2026-01-01. Successfully read inputs file ... Castro git describe: 25.12-10-g53019e1f0 AMReX git describe: 25.12-26-g53dc0a470 Microphysics git describe: 25.12-13-g277b76e4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014322141 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.333165432 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.337646462 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.31383545 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.332290715 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.362568219 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.307217826 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.299318445 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.299144867 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.300494991 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.300301797 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.008006767 seconds Ending run at 06:17:34 UTC on 2026-01-01. Run time = 3.36947522 Run time without initialization = 3.19896159 Average number of zones advanced per microsecond: 0.819 Average number of zones advanced per microsecond per rank: 0.102 TinyProfiler total time across processes [min...avg...max]: 3.3688 ... 3.3691 ... 3.3695 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.2079 2.2476 2.2974 68.18% Gravity::make_radial_gravity() 21 0.2902 0.2974 0.3142 9.33% check_for_negative_density() 10 0.04145 0.09327 0.1325 3.93% Castro::initData() 1 0.03301 0.06899 0.1073 3.18% Castro::estTimeStep() 21 0.02974 0.06717 0.1064 3.16% FabArray::ParallelCopy_finish() 41 0.0366 0.05641 0.1016 3.01% amrex::Copy() 193 0.06593 0.08251 0.09549 2.83% FabArray::setVal() 143 0.05165 0.06679 0.07352 2.18% Castro::reset_internal_energy(Fab) 1008 0.04246 0.04544 0.04684 1.39% FabArray::ParallelCopy_nowait() 41 0.03488 0.03988 0.04162 1.24% Castro::normalize_species() 62 0.03658 0.03778 0.0401 1.19% FillPatchIterator::Initialize 41 0.02785 0.03256 0.03562 1.06% StateData::FillBoundary(geom) 41 0.02782 0.03058 0.03318 0.98% Gravity::interpolate_monopole_grav() 21 0.02591 0.02685 0.02889 0.86% Castro::construct_new_gravity_source() 10 0.02255 0.02342 0.02514 0.75% Castro::initialize_do_advance() 10 0.0116 0.0164 0.01911 0.57% Castro::computeTemp() 63 0.01746 0.01808 0.01839 0.55% Castro::initialize_advance() 10 0.005267 0.01072 0.0137 0.41% FabArray::Saxpy() 20 0.01028 0.01211 0.01338 0.40% Amr::writePlotFile() 2 0.007339 0.01043 0.01269 0.38% VisMF::Write(FabArray) 2 0.008683 0.00966 0.01231 0.37% MultiFab::contains_nan() 20 0.009142 0.0101 0.01134 0.34% FabArray::setDomainBndry() 41 0.007669 0.009585 0.01083 0.32% Castro::construct_old_gravity_source() 10 0.006303 0.008759 0.009456 0.28% Castro::initMFs() 1 0.00654 0.006953 0.008067 0.24% Castro::construct_new_source() 50 0.005594 0.006115 0.00634 0.19% main() 1 0.00386 0.004138 0.004363 0.13% Gravity::get_new_grav_vector() 11 0.002872 0.003383 0.003799 0.11% Amr::coarseTimeStep() 10 0.001024 0.001672 0.002601 0.08% Gravity::get_old_grav_vector() 10 0.001655 0.002036 0.002536 0.08% Castro::finalize_do_advance() 10 0.0005582 0.001031 0.001239 0.04% AmrLevel::FillPatch() 41 0.0007395 0.0009856 0.00113 0.03% Amr::timeStep() 10 0.0001284 0.0001834 0.0004113 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002562 0.0002699 0.0002831 0.01% Castro::do_advance_ctu() 10 0.0001195 0.0001658 0.0002183 0.01% Castro::clean_state() 62 0.0001363 0.0001546 0.0001704 0.01% FillPatchIterator::FillFromLevel0() 41 9.082e-05 0.0001101 0.0001235 0.00% StateDataPhysBCFunct::() 41 0.0001008 0.0001093 0.0001219 0.00% Castro::Castro() 1 5.782e-05 8.711e-05 0.0001099 0.00% Castro::do_old_sources() 10 6.176e-05 8.589e-05 9.96e-05 0.00% FabArray::ParallelCopy() 41 7.737e-05 8.658e-05 9.593e-05 0.00% Amr::FinalizeInit() 1 4.124e-06 1.767e-05 8.769e-05 0.00% Amr::defBaseLevel() 1 3.925e-05 4.842e-05 8.038e-05 0.00% Castro::construct_old_source() 50 5.321e-05 6.803e-05 7.723e-05 0.00% FillPatchSingleLevel 41 6.699e-05 7.029e-05 7.4e-05 0.00% Castro::do_new_sources() 10 4.671e-05 5.942e-05 6.499e-05 0.00% Castro::subcycle_advance_ctu() 10 4.727e-05 5.201e-05 5.896e-05 0.00% Castro::advance() 10 3.216e-05 4.211e-05 5.68e-05 0.00% Castro::apply_source_to_state() 20 3.715e-05 4.614e-05 5.277e-05 0.00% Castro::construct_old_gravity() 10 3.278e-05 4.073e-05 5.146e-05 0.00% Castro::construct_new_gravity() 10 2.75e-05 3.437e-05 4.387e-05 0.00% Castro::expand_state() 10 2.419e-05 2.747e-05 3.308e-05 0.00% Castro::post_timestep() 10 1.423e-05 1.814e-05 2.914e-05 0.00% Castro::check_for_nan() 20 2.383e-05 2.639e-05 2.83e-05 0.00% Castro::computeNewDt() 9 8.979e-06 1.189e-05 2.024e-05 0.00% Castro::post_init() 1 1.5e-05 1.662e-05 1.964e-05 0.00% Castro::computeInitialDt() 2 5.773e-06 6.87e-06 9.188e-06 0.00% Amr::InitializeInit() 1 5.378e-06 6.435e-06 8.932e-06 0.00% Amr::initialInit() 1 1.647e-06 2.114e-06 3.306e-06 0.00% Amr::init() 1 1.701e-06 2.17e-06 2.525e-06 0.00% Other 265 0.0158 0.01842 0.02064 0.61% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.369 3.369 3.369 100.00% Amr::coarseTimeStep() 10 3.187 3.187 3.187 94.57% Amr::timeStep() 10 3.173 3.174 3.175 94.23% Castro::advance() 10 3.159 3.16 3.16 93.78% Castro::subcycle_advance_ctu() 10 3.085 3.089 3.104 92.13% Castro::do_advance_ctu() 10 3.085 3.089 3.104 92.13% Castro::construct_ctu_hydro_source() 10 2.358 2.361 2.362 70.11% Gravity::make_radial_gravity() 21 0.3066 0.3134 0.3267 9.70% AmrLevel::FillPatch() 41 0.1828 0.2018 0.2297 6.82% Gravity::get_new_grav_vector() 11 0.2058 0.2066 0.2079 6.17% Castro::construct_old_gravity() 10 0.1866 0.1915 0.2025 6.01% Gravity::get_old_grav_vector() 10 0.186 0.1908 0.2018 5.99% FillPatchIterator::Initialize 41 0.1539 0.1695 0.2014 5.98% Castro::construct_new_gravity() 10 0.1834 0.1842 0.185 5.49% Amr::init() 1 0.1693 0.1699 0.1703 5.05% FillPatchIterator::FillFromLevel0() 41 0.1081 0.1273 0.1659 4.92% FillPatchSingleLevel 41 0.108 0.1272 0.1658 4.92% Castro::initialize_do_advance() 10 0.1513 0.1576 0.1615 4.79% Amr::initialInit() 1 0.1545 0.1553 0.1558 4.62% FabArray::ParallelCopy() 41 0.0776 0.09647 0.1366 4.06% check_for_negative_density() 10 0.04145 0.09327 0.1325 3.93% Amr::InitializeInit() 1 0.05382 0.09002 0.1288 3.82% Amr::defBaseLevel() 1 0.05382 0.09002 0.1288 3.82% Castro::expand_state() 10 0.09917 0.1072 0.1173 3.48% Castro::initData() 1 0.03662 0.07264 0.1105 3.28% Castro::clean_state() 62 0.1018 0.1068 0.109 3.23% Castro::estTimeStep() 21 0.02974 0.06717 0.1064 3.16% Castro::do_old_sources() 10 0.09129 0.09788 0.1063 3.16% Amr::FinalizeInit() 1 0.02566 0.06526 0.1019 3.02% FabArray::ParallelCopy_finish() 41 0.0366 0.05641 0.1016 3.01% amrex::Copy() 193 0.06593 0.08251 0.09549 2.83% Castro::computeInitialDt() 2 0.002266 0.04142 0.07798 2.31% FabArray::setVal() 143 0.05165 0.06679 0.07352 2.18% Castro::initialize_advance() 10 0.05154 0.0671 0.07174 2.13% Castro::computeTemp() 63 0.06019 0.06379 0.06544 1.94% Castro::do_new_sources() 10 0.05628 0.0609 0.06516 1.93% Castro::reset_internal_energy(MultiFab) 63 0.04274 0.04571 0.04712 1.40% Castro::reset_internal_energy(Fab) 1008 0.04246 0.04544 0.04684 1.39% FabArray::ParallelCopy_nowait() 41 0.03498 0.03997 0.04169 1.24% Castro::normalize_species() 62 0.03658 0.03778 0.0401 1.19% StateDataPhysBCFunct::() 41 0.02793 0.03069 0.03328 0.99% StateData::FillBoundary(geom) 41 0.02782 0.03058 0.03318 0.98% Castro::construct_new_source() 50 0.02825 0.02953 0.03143 0.93% Gravity::interpolate_monopole_grav() 21 0.02591 0.02685 0.02889 0.86% Castro::construct_new_gravity_source() 10 0.02255 0.02342 0.02514 0.75% Castro::post_init() 1 0.02339 0.02356 0.02372 0.70% Amr::writePlotFile() 2 0.02258 0.02272 0.02318 0.69% Castro::finalize_do_advance() 10 0.0121 0.01738 0.02167 0.64% Castro::post_timestep() 10 0.01371 0.01445 0.01482 0.44% Castro::apply_source_to_state() 20 0.01032 0.01216 0.01344 0.40% FabArray::Saxpy() 20 0.01028 0.01211 0.01338 0.40% VisMF::Write(FabArray) 2 0.008683 0.00966 0.01231 0.37% Castro::Castro() 1 0.01039 0.01095 0.01177 0.35% Castro::check_for_nan() 20 0.00917 0.01013 0.01136 0.34% MultiFab::contains_nan() 20 0.009142 0.0101 0.01134 0.34% FabArray::setDomainBndry() 41 0.007669 0.009585 0.01083 0.32% Castro::construct_old_source() 50 0.006357 0.008827 0.009518 0.28% Castro::construct_old_gravity_source() 10 0.006303 0.008759 0.009456 0.28% Castro::computeNewDt() 9 0.009408 0.009423 0.009435 0.28% Castro::initMFs() 1 0.00654 0.006953 0.008067 0.24% Other 265 0.02554 0.02952 0.03291 0.98% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8644 KiB 8653 KiB 8655 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6755 KiB 6762 KiB 6765 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7119 KiB 7126 KiB 7127 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4565 KiB 4571 KiB 4595 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 200 KiB 221 KiB 251 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2804 KiB 2807 KiB 2808 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 231 KiB 236 KiB 247 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 35 KiB 42 KiB 60 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 78 KiB 78 KiB 79 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 70 KiB 72 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-26-g53dc0a470c5d) finalized