Initializing AMReX (25.12-26-g53dc0a470c5d)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (25.12-26-g53dc0a470c5d) initialized Starting run at 06:19:32 UTC on 2026-01-02. Successfully read inputs file ... Castro git describe: 25.12-10-g53019e1f0 AMReX git describe: 25.12-26-g53dc0a470 Microphysics git describe: 25.12-14-g8a6df44d reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.020735971 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.416736377 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.383017874 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.37921151 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.404337759 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.375202036 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.374566157 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.379758263 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.382209102 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.382919049 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.381302149 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.01257024 seconds Ending run at 06:19:36 UTC on 2026-01-02. Run time = 4.085512658 Run time without initialization = 3.879810313 Average number of zones advanced per microsecond: 0.676 Average number of zones advanced per microsecond per rank: 0.084 TinyProfiler total time across processes [min...avg...max]: 4.0793 ... 4.0835 ... 4.0857 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.3240 2.5609 2.8001 68.53% check_for_negative_density() 10 0.008496 0.2544 0.4957 12.13% Gravity::make_radial_gravity() 21 0.2877 0.3065 0.3271 8.01% amrex::Copy() 193 0.0998 0.1171 0.1299 3.18% Castro::estTimeStep() 21 0.03284 0.0734 0.1183 2.90% Castro::initData() 1 0.03521 0.07084 0.1089 2.66% FabArray::setVal() 143 0.09254 0.1 0.1067 2.61% FabArray::ParallelCopy_finish() 41 0.05516 0.06581 0.08622 2.11% FabArray::ParallelCopy_nowait() 41 0.05557 0.06183 0.06596 1.61% FillPatchIterator::Initialize 41 0.04942 0.05675 0.06291 1.54% Castro::reset_internal_energy(Fab) 1008 0.04857 0.05092 0.05289 1.29% StateData::FillBoundary(geom) 41 0.03462 0.04003 0.05137 1.26% Castro::normalize_species() 62 0.03831 0.03899 0.03992 0.98% Castro::construct_new_gravity_source() 10 0.02855 0.03139 0.03519 0.86% Castro::initialize_do_advance() 10 0.02325 0.02562 0.02971 0.73% Gravity::interpolate_monopole_grav() 21 0.02555 0.02592 0.02663 0.65% FabArray::Saxpy() 20 0.01783 0.01987 0.02156 0.53% Castro::computeTemp() 63 0.019 0.02012 0.02129 0.52% FabArray::setDomainBndry() 41 0.01605 0.0184 0.02121 0.52% Amr::writePlotFile() 2 0.01061 0.01477 0.02087 0.51% VisMF::Write(FabArray) 2 0.01022 0.01357 0.01729 0.42% Castro::initialize_advance() 10 0.01556 0.01626 0.01693 0.41% Castro::construct_old_gravity_source() 10 0.01473 0.01582 0.01627 0.40% Castro::initMFs() 1 0.008787 0.01102 0.01588 0.39% MultiFab::contains_nan() 20 0.01245 0.01369 0.01502 0.37% StateData::define() 4 0.007286 0.00841 0.01118 0.27% Castro::construct_new_source() 50 0.007418 0.008224 0.008997 0.22% main() 1 0.006663 0.007212 0.007566 0.19% Gravity::get_new_grav_vector() 11 0.004519 0.005407 0.006106 0.15% Gravity::get_old_grav_vector() 10 0.002667 0.003128 0.003745 0.09% Amr::coarseTimeStep() 10 0.001093 0.001777 0.002456 0.06% Castro::finalize_do_advance() 10 0.001273 0.001342 0.001398 0.03% AmrLevel::FillPatch() 41 0.001054 0.001254 0.001352 0.03% Amr::timeStep() 10 0.0001348 0.0002249 0.0006087 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000319 0.0003448 0.0003855 0.01% Castro::do_advance_ctu() 10 0.0001986 0.000228 0.0002651 0.01% Castro::clean_state() 62 0.0001813 0.0002061 0.0002448 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001483 0.000164 0.0001798 0.00% StateDataPhysBCFunct::() 41 0.0001409 0.0001538 0.0001668 0.00% FabArray::ParallelCopy() 41 0.0001231 0.0001342 0.0001446 0.00% Castro::Castro() 1 6.892e-05 0.0001167 0.000141 0.00% Castro::do_old_sources() 10 0.0001153 0.0001287 0.0001384 0.00% FillPatchSingleLevel 41 9.667e-05 0.0001084 0.0001213 0.00% Amr::FinalizeInit() 1 4.587e-06 2.027e-05 0.0001152 0.00% Castro::construct_old_source() 50 8.947e-05 0.0001005 0.0001107 0.00% Castro::do_new_sources() 10 7.388e-05 8e-05 9.576e-05 0.00% Castro::apply_source_to_state() 20 6.43e-05 7.667e-05 9.453e-05 0.00% Castro::subcycle_advance_ctu() 10 7.17e-05 7.791e-05 8.628e-05 0.00% Castro::construct_old_gravity() 10 4.585e-05 5.295e-05 7.613e-05 0.00% Castro::advance() 10 4.586e-05 5.713e-05 7.437e-05 0.00% Amr::defBaseLevel() 1 4.147e-05 5.218e-05 6.51e-05 0.00% Castro::construct_new_gravity() 10 2.977e-05 4.474e-05 6.263e-05 0.00% Castro::expand_state() 10 3.328e-05 4.599e-05 5.641e-05 0.00% Castro::check_for_nan() 20 3.004e-05 3.443e-05 4.135e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.11e-05 1.547e-05 3.117e-05 0.00% Castro::post_timestep() 10 1.577e-05 1.912e-05 2.463e-05 0.00% Castro::post_init() 1 1.573e-05 1.768e-05 2.299e-05 0.00% Castro::computeNewDt() 9 8.603e-06 9.444e-06 1.049e-05 0.00% Castro::computeInitialDt() 2 7.24e-06 8.325e-06 9.407e-06 0.00% Amr::InitializeInit() 1 6.319e-06 7.268e-06 8.212e-06 0.00% Amr::init() 1 2.117e-06 2.694e-06 3.242e-06 0.00% Amr::initialInit() 1 1.854e-06 2.537e-06 3.161e-06 0.00% Other 260 0.01284 0.02016 0.02447 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 4.079 4.083 4.086 100.00% Amr::coarseTimeStep() 10 3.86 3.86 3.86 94.47% Amr::timeStep() 10 3.847 3.847 3.848 94.18% Castro::advance() 10 3.832 3.833 3.833 93.82% Castro::subcycle_advance_ctu() 10 3.725 3.729 3.737 91.45% Castro::do_advance_ctu() 10 3.724 3.729 3.736 91.45% Castro::construct_ctu_hydro_source() 10 2.83 2.836 2.841 69.55% check_for_negative_density() 10 0.008496 0.2544 0.4957 12.13% Gravity::make_radial_gravity() 21 0.3116 0.3308 0.3496 8.56% AmrLevel::FillPatch() 41 0.2732 0.2919 0.3117 7.63% FillPatchIterator::Initialize 41 0.2325 0.2435 0.2565 6.28% Castro::initialize_do_advance() 10 0.22 0.2332 0.2473 6.05% Gravity::get_new_grav_vector() 11 0.2287 0.2301 0.2311 5.66% Castro::construct_old_gravity() 10 0.1885 0.2038 0.2198 5.38% Gravity::get_old_grav_vector() 10 0.1876 0.203 0.2188 5.36% Amr::init() 1 0.1995 0.2035 0.2054 5.03% Castro::construct_new_gravity() 10 0.1988 0.2004 0.2017 4.94% Amr::initialInit() 1 0.1787 0.1826 0.1844 4.51% Castro::expand_state() 10 0.1491 0.1642 0.1815 4.44% FillPatchIterator::FillFromLevel0() 41 0.1594 0.1684 0.1782 4.36% FillPatchSingleLevel 41 0.1593 0.1682 0.1781 4.36% Amr::InitializeInit() 1 0.06737 0.1044 0.1451 3.55% Amr::defBaseLevel() 1 0.06737 0.1044 0.1451 3.55% FabArray::ParallelCopy() 41 0.1204 0.1279 0.1421 3.48% Castro::do_old_sources() 10 0.1366 0.1381 0.1403 3.43% amrex::Copy() 193 0.0998 0.1171 0.1299 3.18% Castro::clean_state() 62 0.1133 0.117 0.121 2.96% Castro::estTimeStep() 21 0.03284 0.0734 0.1183 2.90% Amr::FinalizeInit() 1 0.03365 0.07814 0.1169 2.86% Castro::initData() 1 0.0398 0.07512 0.1129 2.76% FabArray::setVal() 143 0.09254 0.1 0.1067 2.61% Castro::initialize_advance() 10 0.09109 0.09887 0.1032 2.52% FabArray::ParallelCopy_finish() 41 0.05516 0.06581 0.08622 2.11% Castro::computeInitialDt() 2 0.002455 0.04696 0.08571 2.10% Castro::do_new_sources() 10 0.07231 0.07688 0.08146 1.99% Castro::computeTemp() 63 0.06791 0.07139 0.07454 1.82% FabArray::ParallelCopy_nowait() 41 0.05572 0.06197 0.06609 1.62% Castro::reset_internal_energy(MultiFab) 63 0.04891 0.05126 0.05325 1.30% Castro::reset_internal_energy(Fab) 1008 0.04857 0.05092 0.05289 1.29% StateDataPhysBCFunct::() 41 0.03477 0.04019 0.05153 1.26% StateData::FillBoundary(geom) 41 0.03462 0.04003 0.05137 1.26% Castro::construct_new_source() 50 0.03612 0.03961 0.04418 1.08% Castro::normalize_species() 62 0.03831 0.03899 0.03992 0.98% Castro::construct_new_gravity_source() 10 0.02855 0.03139 0.03519 0.86% Amr::writePlotFile() 2 0.03284 0.0336 0.0343 0.84% Castro::post_init() 1 0.03016 0.03087 0.03171 0.78% Gravity::interpolate_monopole_grav() 21 0.02555 0.02592 0.02663 0.65% Castro::finalize_do_advance() 10 0.01191 0.01851 0.02525 0.62% Castro::apply_source_to_state() 20 0.0179 0.01994 0.02165 0.53% FabArray::Saxpy() 20 0.01783 0.01987 0.02156 0.53% Castro::Castro() 1 0.01451 0.01681 0.0215 0.53% FabArray::setDomainBndry() 41 0.01605 0.0184 0.02121 0.52% VisMF::Write(FabArray) 2 0.01022 0.01357 0.01729 0.42% Castro::construct_old_source() 50 0.01483 0.01592 0.01638 0.40% Castro::construct_old_gravity_source() 10 0.01473 0.01582 0.01627 0.40% Castro::initMFs() 1 0.008787 0.01102 0.01588 0.39% Castro::post_timestep() 10 0.01451 0.0147 0.01521 0.37% Castro::check_for_nan() 20 0.01249 0.01373 0.01506 0.37% MultiFab::contains_nan() 20 0.01245 0.01369 0.01502 0.37% AmrLevel::AmrLevel(dm) 1 0.007298 0.008426 0.01121 0.27% StateData::define() 4 0.007286 0.00841 0.01118 0.27% Castro::computeNewDt() 9 0.009286 0.009299 0.009319 0.23% Other 260 0.01864 0.03055 0.03745 0.92% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 12 MiB 13 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 2 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 12 MiB 13 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8624 KiB 8633 KiB 8638 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6752 KiB 6758 KiB 6761 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7108 KiB 7116 KiB 7117 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4546 KiB 4551 KiB 4561 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 251 KiB 271 KiB 293 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 20 KiB 25 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2805 KiB 2808 KiB 2810 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 193 KiB 205 KiB 217 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 46 KiB 48 KiB 52 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2020 KiB 2021 KiB 2022 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 71 KiB 72 KiB 72 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 58 KiB 63 KiB 68 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (25.12-26-g53dc0a470c5d) finalized