Initializing AMReX (26.01-1-g838b11ef0978)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-1-g838b11ef0978) initialized Starting run at 19:32:21 UTC on 2026-01-05. Successfully read inputs file ... Castro git describe: 26.01 AMReX git describe: 26.01-1-g838b11ef0 Microphysics git describe: 26.01-3-gdf3029bf reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014375502 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.347667464 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.334499959 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.313463036 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.31449368 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.368067514 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.304149063 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.29807837 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.299895534 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.296751363 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.302575365 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007632226 seconds Ending run at 19:32:25 UTC on 2026-01-05. Run time = 3.357338338 Run time without initialization = 3.192352902 Average number of zones advanced per microsecond: 0.821 Average number of zones advanced per microsecond per rank: 0.103 TinyProfiler total time across processes [min...avg...max]: 3.3565 ... 3.3569 ... 3.3574 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1673 2.2499 2.2917 68.26% Gravity::make_radial_gravity() 21 0.2756 0.2843 0.3017 8.99% check_for_negative_density() 10 0.06106 0.1019 0.1884 5.61% Castro::initData() 1 0.03323 0.06897 0.1026 3.06% Castro::estTimeStep() 21 0.02663 0.0627 0.1008 3.00% FabArray::ParallelCopy_finish() 41 0.03588 0.05597 0.09856 2.94% amrex::Copy() 193 0.06384 0.08051 0.08925 2.66% FabArray::setVal() 143 0.05239 0.06607 0.07128 2.12% Castro::reset_internal_energy(Fab) 1008 0.04066 0.04443 0.04697 1.40% FabArray::ParallelCopy_nowait() 41 0.03492 0.04005 0.04445 1.32% Castro::normalize_species() 62 0.03637 0.03694 0.03763 1.12% FillPatchIterator::Initialize 41 0.0274 0.032 0.03472 1.03% StateData::FillBoundary(geom) 41 0.02632 0.03051 0.03258 0.97% Castro::construct_new_gravity_source() 10 0.02196 0.02409 0.0272 0.81% Gravity::interpolate_monopole_grav() 21 0.0254 0.02567 0.02596 0.77% Castro::computeTemp() 63 0.01651 0.0176 0.01825 0.54% FabArray::setDomainBndry() 41 0.00763 0.01053 0.01779 0.53% Castro::initialize_do_advance() 10 0.01133 0.01618 0.01737 0.52% FabArray::Saxpy() 20 0.01057 0.0123 0.0135 0.40% Castro::initialize_advance() 10 0.005311 0.01061 0.01334 0.40% VisMF::Write(FabArray) 2 0.009112 0.009712 0.01295 0.39% MultiFab::contains_nan() 20 0.009285 0.01024 0.01132 0.34% Castro::construct_old_gravity_source() 10 0.006853 0.009299 0.01013 0.30% Amr::writePlotFile() 2 0.007216 0.009513 0.01013 0.30% Castro::initMFs() 1 0.00649 0.006877 0.008439 0.25% Castro::construct_new_source() 50 0.005338 0.006094 0.006593 0.20% main() 1 0.003904 0.004174 0.00447 0.13% Gravity::get_new_grav_vector() 11 0.002715 0.003402 0.003789 0.11% Amr::coarseTimeStep() 10 0.0007946 0.001573 0.0025 0.07% Gravity::get_old_grav_vector() 10 0.001491 0.00204 0.002483 0.07% Castro::finalize_do_advance() 10 0.000542 0.001049 0.001226 0.04% AmrLevel::FillPatch() 41 0.0007384 0.001093 0.001224 0.04% Amr::timeStep() 10 0.0001322 0.0001768 0.0003976 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002627 0.000278 0.0003039 0.01% Castro::do_advance_ctu() 10 0.0001371 0.0001696 0.0001928 0.01% Castro::clean_state() 62 0.0001331 0.000154 0.0001761 0.01% StateDataPhysBCFunct::() 41 9.308e-05 0.000121 0.0001581 0.00% FillPatchIterator::FillFromLevel0() 41 9.647e-05 0.0001129 0.0001498 0.00% FillPatchSingleLevel 41 6.265e-05 7.946e-05 0.0001297 0.00% Castro::Castro() 1 5.638e-05 9.174e-05 0.0001083 0.00% Castro::do_old_sources() 10 6.673e-05 8.899e-05 0.0001081 0.00% FabArray::ParallelCopy() 41 7.883e-05 8.759e-05 9.931e-05 0.00% Amr::FinalizeInit() 1 4.258e-06 1.454e-05 8.08e-05 0.00% Castro::construct_old_source() 50 3.846e-05 6.485e-05 7.506e-05 0.00% Castro::apply_source_to_state() 20 4.416e-05 5.433e-05 7.033e-05 0.00% Castro::do_new_sources() 10 5.057e-05 6.02e-05 6.973e-05 0.00% Castro::subcycle_advance_ctu() 10 4.262e-05 5.362e-05 6.841e-05 0.00% Castro::construct_old_gravity() 10 3.023e-05 3.796e-05 5.114e-05 0.00% Castro::advance() 10 3.638e-05 4.175e-05 4.804e-05 0.00% Castro::construct_new_gravity() 10 3.184e-05 3.596e-05 4.789e-05 0.00% Amr::defBaseLevel() 1 3.579e-05 4.125e-05 4.669e-05 0.00% Castro::check_for_nan() 20 2.323e-05 2.786e-05 3.11e-05 0.00% Castro::expand_state() 10 2.142e-05 2.428e-05 2.933e-05 0.00% Castro::post_timestep() 10 1.396e-05 1.719e-05 2.886e-05 0.00% Castro::post_init() 1 1.396e-05 1.573e-05 1.811e-05 0.00% Castro::computeNewDt() 9 8.674e-06 9.673e-06 1.043e-05 0.00% Castro::computeInitialDt() 2 5.96e-06 6.938e-06 7.815e-06 0.00% Amr::InitializeInit() 1 5.301e-06 5.788e-06 7.234e-06 0.00% Amr::init() 1 1.782e-06 2.112e-06 2.584e-06 0.00% Amr::initialInit() 1 1.419e-06 1.916e-06 2.279e-06 0.00% Other 265 0.01491 0.01879 0.02107 0.63% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.356 3.357 3.357 100.00% Amr::coarseTimeStep() 10 3.18 3.18 3.18 94.73% Amr::timeStep() 10 3.167 3.168 3.169 94.39% Castro::advance() 10 3.153 3.154 3.154 93.95% Castro::subcycle_advance_ctu() 10 3.079 3.084 3.1 92.33% Castro::do_advance_ctu() 10 3.079 3.084 3.1 92.33% Castro::construct_ctu_hydro_source() 10 2.366 2.371 2.376 70.78% Gravity::make_radial_gravity() 21 0.2927 0.3005 0.3153 9.39% AmrLevel::FillPatch() 41 0.1871 0.2027 0.2195 6.54% Gravity::get_new_grav_vector() 11 0.2019 0.2027 0.2044 6.09% FillPatchIterator::Initialize 41 0.1568 0.1696 0.1953 5.82% Castro::construct_old_gravity() 10 0.1719 0.1771 0.1894 5.64% Gravity::get_old_grav_vector() 10 0.1712 0.1764 0.1887 5.62% check_for_negative_density() 10 0.06106 0.1019 0.1884 5.61% Castro::construct_new_gravity() 10 0.1791 0.1802 0.1813 5.40% Amr::init() 1 0.1636 0.1645 0.1648 4.91% FillPatchIterator::FillFromLevel0() 41 0.1114 0.127 0.1602 4.77% FillPatchSingleLevel 41 0.1113 0.1269 0.1601 4.77% Castro::initialize_do_advance() 10 0.1502 0.1563 0.1601 4.77% Amr::initialInit() 1 0.149 0.1503 0.1507 4.49% FabArray::ParallelCopy() 41 0.08054 0.0962 0.1337 3.98% Amr::InitializeInit() 1 0.05458 0.09032 0.1243 3.70% Amr::defBaseLevel() 1 0.05457 0.09032 0.1243 3.70% Castro::expand_state() 10 0.09917 0.1064 0.1172 3.49% Castro::clean_state() 62 0.09976 0.1046 0.1078 3.21% Castro::do_old_sources() 10 0.09039 0.1021 0.1078 3.21% Castro::initData() 1 0.037 0.07259 0.1062 3.16% Castro::estTimeStep() 21 0.02663 0.0627 0.1008 3.00% FabArray::ParallelCopy_finish() 41 0.03588 0.05597 0.09856 2.94% Amr::FinalizeInit() 1 0.02629 0.06002 0.09612 2.86% amrex::Copy() 193 0.06384 0.08051 0.08925 2.66% Castro::computeInitialDt() 2 0.002289 0.03606 0.07205 2.15% Castro::initialize_advance() 10 0.05005 0.06671 0.07165 2.13% FabArray::setVal() 143 0.05239 0.06607 0.07128 2.12% Castro::do_new_sources() 10 0.05584 0.06152 0.06699 2.00% Castro::computeTemp() 63 0.05743 0.06231 0.06541 1.95% Castro::reset_internal_energy(MultiFab) 63 0.04092 0.04471 0.04725 1.41% Castro::reset_internal_energy(Fab) 1008 0.04066 0.04443 0.04697 1.40% FabArray::ParallelCopy_nowait() 41 0.03502 0.04014 0.04456 1.33% Castro::normalize_species() 62 0.03637 0.03694 0.03763 1.12% Castro::construct_new_source() 50 0.0273 0.03018 0.03379 1.01% StateDataPhysBCFunct::() 41 0.02642 0.03063 0.0327 0.97% StateData::FillBoundary(geom) 41 0.02632 0.03051 0.03258 0.97% Castro::construct_new_gravity_source() 10 0.02196 0.02409 0.0272 0.81% Gravity::interpolate_monopole_grav() 21 0.0254 0.02567 0.02596 0.77% Castro::finalize_do_advance() 10 0.0127 0.01839 0.02388 0.71% Castro::post_init() 1 0.02319 0.02364 0.02381 0.71% Amr::writePlotFile() 2 0.02178 0.02189 0.02226 0.66% FabArray::setDomainBndry() 41 0.00763 0.01053 0.01779 0.53% Castro::post_timestep() 10 0.01354 0.01433 0.01481 0.44% Castro::apply_source_to_state() 20 0.01062 0.01235 0.01355 0.40% FabArray::Saxpy() 20 0.01057 0.0123 0.0135 0.40% VisMF::Write(FabArray) 2 0.009112 0.009712 0.01295 0.39% Castro::Castro() 1 0.01064 0.0111 0.01191 0.35% Castro::check_for_nan() 20 0.009316 0.01027 0.01135 0.34% MultiFab::contains_nan() 20 0.009285 0.01024 0.01132 0.34% Castro::construct_old_source() 50 0.006891 0.009363 0.0102 0.30% Castro::construct_old_gravity_source() 10 0.006853 0.009299 0.01013 0.30% Castro::computeNewDt() 9 0.009297 0.009318 0.00934 0.28% Castro::initMFs() 1 0.00649 0.006877 0.008439 0.25% Other 265 0.02491 0.03012 0.03347 1.00% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8640 KiB 8652 KiB 8655 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6768 KiB 6772 KiB 6773 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7117 KiB 7125 KiB 7127 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4573 KiB 4580 KiB 4600 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 206 KiB 224 KiB 245 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 16 KiB 19 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2808 KiB 2812 KiB 2813 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 221 KiB 227 KiB 238 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 42 KiB 61 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 77 KiB 77 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 65 KiB 67 KiB 72 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-1-g838b11ef0978) finalized