Initializing AMReX (26.01)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01) initialized Starting run at 06:18:40 UTC on 2026-01-05. Successfully read inputs file ... Castro git describe: 26.01 AMReX git describe: 26.01 Microphysics git describe: 26.01 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.020179933 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.419877575 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.383857 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.383565044 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.401982899 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.377216313 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.377552489 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.381197363 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.382223246 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.376569573 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.380809562 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.013139099 seconds Ending run at 06:18:44 UTC on 2026-01-05. Run time = 4.084927199 Run time without initialization = 3.886643632 Average number of zones advanced per microsecond: 0.674 Average number of zones advanced per microsecond per rank: 0.084 TinyProfiler total time across processes [min...avg...max]: 4.0777 ... 4.0817 ... 4.0850 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.3368 2.5791 2.7850 68.18% check_for_negative_density() 10 0.02443 0.2358 0.4852 11.88% Gravity::make_radial_gravity() 21 0.2884 0.3052 0.3275 8.02% amrex::Copy() 193 0.09942 0.1203 0.1343 3.29% Castro::estTimeStep() 21 0.02994 0.0691 0.1084 2.65% Castro::initData() 1 0.03317 0.07162 0.1066 2.61% FabArray::setVal() 143 0.0898 0.09997 0.1041 2.55% FabArray::ParallelCopy_finish() 41 0.05508 0.06647 0.08532 2.09% FabArray::ParallelCopy_nowait() 41 0.05674 0.06249 0.06664 1.63% FillPatchIterator::Initialize 41 0.04846 0.05637 0.06378 1.56% Castro::reset_internal_energy(Fab) 1008 0.04778 0.05067 0.05232 1.28% StateData::FillBoundary(geom) 41 0.03544 0.03936 0.04438 1.09% Castro::normalize_species() 62 0.03784 0.03878 0.03953 0.97% Castro::construct_new_gravity_source() 10 0.02942 0.03124 0.03348 0.82% Castro::initialize_do_advance() 10 0.02324 0.02531 0.02727 0.67% Gravity::interpolate_monopole_grav() 21 0.02555 0.02612 0.0266 0.65% FabArray::setDomainBndry() 41 0.01513 0.0195 0.02254 0.55% FabArray::Saxpy() 20 0.01881 0.02005 0.02175 0.53% Castro::computeTemp() 63 0.01872 0.0199 0.02054 0.50% VisMF::Write(FabArray) 2 0.01129 0.01368 0.01786 0.44% Amr::writePlotFile() 2 0.009791 0.01441 0.01735 0.42% Castro::initialize_advance() 10 0.01506 0.01606 0.01676 0.41% Castro::construct_old_gravity_source() 10 0.01499 0.01599 0.01623 0.40% MultiFab::contains_nan() 20 0.01167 0.01388 0.01543 0.38% Castro::initMFs() 1 0.008574 0.01131 0.01392 0.34% StateData::define() 4 0.007086 0.009267 0.01141 0.28% Castro::construct_new_source() 50 0.007336 0.008529 0.009528 0.23% main() 1 0.00504 0.007025 0.008008 0.20% Gravity::get_new_grav_vector() 11 0.003917 0.005297 0.006237 0.15% Gravity::get_old_grav_vector() 10 0.002528 0.003001 0.003272 0.08% Amr::coarseTimeStep() 10 0.001212 0.001932 0.003171 0.08% Castro::finalize_do_advance() 10 0.001434 0.001499 0.001754 0.04% AmrLevel::FillPatch() 41 0.001219 0.001355 0.001563 0.04% Castro::Castro() 1 6.968e-05 0.0001433 0.0004986 0.01% Amr::timeStep() 10 0.0001541 0.0002152 0.0004123 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0003149 0.0003339 0.0003597 0.01% Castro::do_advance_ctu() 10 0.0002088 0.0002315 0.0002673 0.01% Castro::clean_state() 62 0.0001799 0.000211 0.0002549 0.01% FillPatchIterator::FillFromLevel0() 41 0.0001483 0.0001641 0.0001814 0.00% StateDataPhysBCFunct::() 41 0.0001358 0.000153 0.000171 0.00% FabArray::ParallelCopy() 41 0.0001251 0.0001364 0.0001631 0.00% Castro::do_old_sources() 10 0.0001167 0.0001325 0.0001595 0.00% FillPatchSingleLevel 41 0.0001008 0.0001104 0.0001306 0.00% Amr::FinalizeInit() 1 5.694e-06 2.022e-05 0.0001167 0.00% Castro::construct_old_source() 50 9.171e-05 0.0001038 0.000113 0.00% Castro::do_new_sources() 10 7.664e-05 8.578e-05 0.0001063 0.00% Castro::apply_source_to_state() 20 6.42e-05 7.53e-05 0.0001059 0.00% Castro::subcycle_advance_ctu() 10 6.765e-05 7.853e-05 8.846e-05 0.00% Castro::advance() 10 4.69e-05 5.554e-05 7.405e-05 0.00% Amr::defBaseLevel() 1 4.491e-05 6.082e-05 7.016e-05 0.00% Castro::construct_old_gravity() 10 4.182e-05 5.254e-05 6.708e-05 0.00% Castro::construct_new_gravity() 10 2.914e-05 4.348e-05 5.851e-05 0.00% Castro::expand_state() 10 3.541e-05 4.398e-05 5.145e-05 0.00% Castro::post_init() 1 1.626e-05 2.549e-05 4.075e-05 0.00% Castro::check_for_nan() 20 2.775e-05 3.316e-05 3.891e-05 0.00% Castro::post_timestep() 10 1.672e-05 1.951e-05 2.543e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.098e-05 1.764e-05 2.348e-05 0.00% Amr::InitializeInit() 1 6.387e-06 9.016e-06 1.644e-05 0.00% Castro::computeNewDt() 9 8.927e-06 9.916e-06 1.17e-05 0.00% Castro::computeInitialDt() 2 7.912e-06 8.687e-06 1.034e-05 0.00% Amr::init() 1 2.168e-06 2.936e-06 4.029e-06 0.00% Amr::initialInit() 1 2.252e-06 2.988e-06 3.77e-06 0.00% Other 260 0.01345 0.01847 0.02266 0.55% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 4.078 4.082 4.085 100.00% Amr::coarseTimeStep() 10 3.866 3.866 3.866 94.63% Amr::timeStep() 10 3.851 3.852 3.853 94.32% Castro::advance() 10 3.837 3.838 3.838 93.95% Castro::subcycle_advance_ctu() 10 3.731 3.734 3.742 91.61% Castro::do_advance_ctu() 10 3.731 3.734 3.742 91.60% Castro::construct_ctu_hydro_source() 10 2.831 2.836 2.842 69.58% check_for_negative_density() 10 0.02443 0.2358 0.4852 11.88% Gravity::make_radial_gravity() 21 0.3144 0.3296 0.3503 8.58% AmrLevel::FillPatch() 41 0.2796 0.296 0.3117 7.63% FillPatchIterator::Initialize 41 0.2385 0.2449 0.2521 6.17% Castro::initialize_do_advance() 10 0.2203 0.2357 0.2462 6.03% Gravity::get_new_grav_vector() 11 0.2301 0.2306 0.2313 5.66% Castro::construct_old_gravity() 10 0.1918 0.2028 0.2185 5.35% Gravity::get_old_grav_vector() 10 0.1908 0.2019 0.2178 5.33% Castro::construct_new_gravity() 10 0.2021 0.2031 0.2039 4.99% Amr::init() 1 0.1935 0.1955 0.1977 4.84% FillPatchIterator::FillFromLevel0() 41 0.1624 0.169 0.1813 4.44% FillPatchSingleLevel 41 0.1622 0.1689 0.1811 4.43% Castro::expand_state() 10 0.1513 0.167 0.1801 4.41% Amr::initialInit() 1 0.1732 0.1751 0.1773 4.34% FabArray::ParallelCopy() 41 0.122 0.1292 0.1424 3.49% Amr::InitializeInit() 1 0.06195 0.1038 0.1417 3.47% Amr::defBaseLevel() 1 0.06194 0.1038 0.1417 3.47% Castro::do_old_sources() 10 0.1362 0.1383 0.1399 3.42% amrex::Copy() 193 0.09942 0.1203 0.1343 3.29% Castro::clean_state() 62 0.1131 0.1165 0.1182 2.89% Amr::FinalizeInit() 1 0.03152 0.07134 0.1154 2.82% Castro::initData() 1 0.03713 0.07559 0.1105 2.70% Castro::estTimeStep() 21 0.02994 0.0691 0.1084 2.65% FabArray::setVal() 143 0.0898 0.09997 0.1041 2.55% Castro::initialize_advance() 10 0.09049 0.09896 0.1017 2.49% Castro::computeInitialDt() 2 0.002503 0.04231 0.08635 2.11% FabArray::ParallelCopy_finish() 41 0.05508 0.06647 0.08532 2.09% Castro::do_new_sources() 10 0.07301 0.07785 0.08139 1.99% Castro::computeTemp() 63 0.06685 0.0709 0.07315 1.79% FabArray::ParallelCopy_nowait() 41 0.05688 0.06263 0.06679 1.63% Castro::reset_internal_energy(MultiFab) 63 0.04813 0.051 0.05263 1.29% Castro::reset_internal_energy(Fab) 1008 0.04778 0.05067 0.05232 1.28% StateDataPhysBCFunct::() 41 0.03558 0.03951 0.04455 1.09% StateData::FillBoundary(geom) 41 0.03544 0.03936 0.04438 1.09% Castro::construct_new_source() 50 0.03685 0.03977 0.04274 1.05% Castro::normalize_species() 62 0.03784 0.03878 0.03953 0.97% Amr::writePlotFile() 2 0.03351 0.03361 0.03372 0.83% Castro::construct_new_gravity_source() 10 0.02942 0.03124 0.03348 0.82% Castro::post_init() 1 0.02865 0.02879 0.02896 0.71% Gravity::interpolate_monopole_grav() 21 0.02555 0.02612 0.0266 0.65% Castro::finalize_do_advance() 10 0.01346 0.01816 0.02463 0.60% FabArray::setDomainBndry() 41 0.01513 0.0195 0.02254 0.55% Castro::apply_source_to_state() 20 0.01888 0.02013 0.02186 0.54% FabArray::Saxpy() 20 0.01881 0.02005 0.02175 0.53% Castro::Castro() 1 0.01327 0.01677 0.02045 0.50% VisMF::Write(FabArray) 2 0.01129 0.01368 0.01786 0.44% Castro::construct_old_source() 50 0.0151 0.01609 0.01635 0.40% Castro::construct_old_gravity_source() 10 0.01499 0.01599 0.01623 0.40% Castro::check_for_nan() 20 0.0117 0.01391 0.01546 0.38% MultiFab::contains_nan() 20 0.01167 0.01388 0.01543 0.38% Castro::post_timestep() 10 0.01351 0.01444 0.01487 0.36% Castro::initMFs() 1 0.008574 0.01131 0.01392 0.34% AmrLevel::AmrLevel(dm) 1 0.007097 0.009284 0.01143 0.28% StateData::define() 4 0.007086 0.009267 0.01141 0.28% Castro::computeNewDt() 9 0.01013 0.01015 0.01015 0.25% Other 260 0.01924 0.02704 0.0339 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 12 MiB 13 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 2 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 12 MiB 13 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8625 KiB 8631 KiB 8641 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6764 KiB 6770 KiB 6773 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7110 KiB 7116 KiB 7118 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4553 KiB 4557 KiB 4568 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 256 KiB 275 KiB 293 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 19 KiB 21 KiB 25 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2809 KiB 2812 KiB 2813 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 195 KiB 205 KiB 218 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 46 KiB 48 KiB 52 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2019 KiB 2021 KiB 2022 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 72 KiB 72 KiB 72 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 59 KiB 63 KiB 68 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01) finalized