Initializing AMReX (26.01-5-g005066b9e5ef)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-5-g005066b9e5ef) initialized Starting run at 06:17:24 UTC on 2026-01-08. Successfully read inputs file ... Castro git describe: 26.01-1-ge6f237912 AMReX git describe: 26.01-5-g005066b9e Microphysics git describe: 26.01-4-g935d36be reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014827496 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.343519845 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.341682337 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.327001194 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.332393324 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.360181169 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.31836083 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.32057444 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.312380721 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.310645634 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.312384173 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.008818854 seconds Ending run at 06:17:27 UTC on 2026-01-08. Run time = 3.462766718 Run time without initialization = 3.294015697 Average number of zones advanced per microsecond: 0.796 Average number of zones advanced per microsecond per rank: 0.099 TinyProfiler total time across processes [min...avg...max]: 3.4607 ... 3.4617 ... 3.4628 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1867 2.2792 2.3554 68.02% Gravity::make_radial_gravity() 21 0.2948 0.3032 0.3211 9.27% check_for_negative_density() 10 0.03669 0.1162 0.2157 6.23% Castro::initData() 1 0.03413 0.06964 0.1042 3.01% Castro::estTimeStep() 21 0.02841 0.06422 0.09992 2.89% amrex::Copy() 193 0.07638 0.08653 0.09402 2.72% FabArray::ParallelCopy_finish() 41 0.04613 0.06654 0.09042 2.61% FabArray::setVal() 143 0.06573 0.07252 0.0791 2.28% Castro::reset_internal_energy(Fab) 1008 0.04325 0.04591 0.04776 1.38% FabArray::ParallelCopy_nowait() 41 0.03686 0.04166 0.0449 1.30% FillPatchIterator::Initialize 41 0.02734 0.0346 0.03926 1.13% Castro::normalize_species() 62 0.03638 0.03728 0.03822 1.10% StateData::FillBoundary(geom) 41 0.02726 0.03205 0.03537 1.02% Gravity::interpolate_monopole_grav() 21 0.02556 0.02605 0.02674 0.77% Castro::construct_new_gravity_source() 10 0.0225 0.02395 0.02499 0.72% Castro::computeTemp() 63 0.01722 0.01822 0.01872 0.54% Castro::initialize_do_advance() 10 0.01407 0.01681 0.01852 0.53% FabArray::setDomainBndry() 41 0.007622 0.01148 0.01457 0.42% FabArray::Saxpy() 20 0.01114 0.01289 0.01436 0.41% VisMF::Write(FabArray) 2 0.009297 0.01004 0.01365 0.39% MultiFab::contains_nan() 20 0.009543 0.01174 0.0136 0.39% Castro::initialize_advance() 10 0.01074 0.01209 0.0136 0.39% Amr::writePlotFile() 2 0.007296 0.01061 0.01165 0.34% Castro::construct_old_gravity_source() 10 0.008189 0.009463 0.01057 0.31% Castro::initMFs() 1 0.006625 0.007069 0.008168 0.24% Castro::construct_new_source() 50 0.005819 0.006357 0.006683 0.19% main() 1 0.003543 0.004968 0.005567 0.16% Gravity::get_new_grav_vector() 11 0.003077 0.003915 0.004401 0.13% Gravity::get_old_grav_vector() 10 0.001601 0.002102 0.00277 0.08% Amr::coarseTimeStep() 10 0.0008908 0.001237 0.001816 0.05% Castro::finalize_do_advance() 10 0.001272 0.001327 0.001419 0.04% AmrLevel::FillPatch() 41 0.001055 0.001158 0.001214 0.04% FabArray::ParallelCopy() 41 9.186e-05 0.0001528 0.0005018 0.01% Amr::timeStep() 10 0.0001323 0.000202 0.0004393 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002612 0.0002789 0.0003007 0.01% Castro::do_advance_ctu() 10 0.0001491 0.0001781 0.0002219 0.01% Castro::clean_state() 62 0.0001389 0.0001632 0.0001849 0.01% StateDataPhysBCFunct::() 41 0.0001189 0.0001427 0.0001629 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001075 0.0001218 0.0001411 0.00% Amr::FinalizeInit() 1 4.342e-06 1.879e-05 0.0001149 0.00% Castro::do_old_sources() 10 8.646e-05 9.59e-05 0.0001133 0.00% FillPatchSingleLevel 41 7.389e-05 8.517e-05 0.0001047 0.00% Castro::Castro() 1 5.835e-05 7.77e-05 0.0001028 0.00% Castro::construct_old_source() 50 5.68e-05 6.879e-05 8.834e-05 0.00% Castro::do_new_sources() 10 5.664e-05 6.557e-05 7.778e-05 0.00% Castro::subcycle_advance_ctu() 10 4.885e-05 5.559e-05 6.816e-05 0.00% Castro::advance() 10 4.091e-05 4.774e-05 6.656e-05 0.00% Castro::apply_source_to_state() 20 4.089e-05 5.451e-05 6.327e-05 0.00% Castro::construct_old_gravity() 10 3.67e-05 4.28e-05 5.208e-05 0.00% Amr::defBaseLevel() 1 3.893e-05 4.474e-05 5.037e-05 0.00% Castro::construct_new_gravity() 10 3.196e-05 3.651e-05 4.406e-05 0.00% Castro::expand_state() 10 2.565e-05 3.031e-05 4.094e-05 0.00% Castro::check_for_nan() 20 2.434e-05 2.793e-05 3.083e-05 0.00% Castro::post_init() 1 1.518e-05 1.997e-05 2.791e-05 0.00% Castro::post_timestep() 10 1.579e-05 1.878e-05 2.176e-05 0.00% Castro::computeNewDt() 9 9.404e-06 1.01e-05 1.071e-05 0.00% Castro::computeInitialDt() 2 5.241e-06 6.976e-06 8.926e-06 0.00% Amr::InitializeInit() 1 5.178e-06 5.841e-06 7.629e-06 0.00% Amr::init() 1 1.706e-06 2.305e-06 3.417e-06 0.00% Amr::initialInit() 1 1.727e-06 2.133e-06 2.468e-06 0.00% Other 265 0.01626 0.01862 0.02094 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.461 3.462 3.463 100.00% Amr::coarseTimeStep() 10 3.28 3.28 3.28 94.71% Amr::timeStep() 10 3.267 3.268 3.268 94.39% Castro::advance() 10 3.253 3.253 3.254 93.96% Castro::subcycle_advance_ctu() 10 3.167 3.178 3.185 91.98% Castro::do_advance_ctu() 10 3.167 3.178 3.185 91.98% Castro::construct_ctu_hydro_source() 10 2.411 2.415 2.422 69.94% Gravity::make_radial_gravity() 21 0.3138 0.3203 0.3338 9.64% AmrLevel::FillPatch() 41 0.2083 0.2239 0.2327 6.72% check_for_negative_density() 10 0.03669 0.1162 0.2157 6.23% Gravity::get_new_grav_vector() 11 0.2085 0.2103 0.2116 6.11% Castro::construct_old_gravity() 10 0.1885 0.1953 0.2061 5.95% Gravity::get_old_grav_vector() 10 0.1877 0.1944 0.205 5.92% FillPatchIterator::Initialize 41 0.1733 0.1869 0.1947 5.62% Castro::initialize_do_advance() 10 0.1667 0.1813 0.1895 5.47% Castro::construct_new_gravity() 10 0.1858 0.187 0.1881 5.43% Amr::init() 1 0.1674 0.1679 0.1684 4.86% FillPatchIterator::FillFromLevel0() 41 0.1219 0.1409 0.1575 4.55% FillPatchSingleLevel 41 0.1218 0.1407 0.1574 4.54% Amr::initialInit() 1 0.1524 0.153 0.1536 4.44% Castro::expand_state() 10 0.1131 0.1285 0.138 3.98% FabArray::ParallelCopy() 41 0.08988 0.1085 0.1275 3.68% Amr::InitializeInit() 1 0.05526 0.09079 0.1258 3.63% Amr::defBaseLevel() 1 0.05525 0.09078 0.1258 3.63% Castro::clean_state() 62 0.1029 0.107 0.1103 3.18% Castro::initData() 1 0.03778 0.07339 0.1075 3.10% Castro::do_old_sources() 10 0.09432 0.1009 0.1043 3.01% Castro::estTimeStep() 21 0.02841 0.06422 0.09992 2.89% Amr::FinalizeInit() 1 0.02672 0.06223 0.09832 2.84% amrex::Copy() 193 0.07638 0.08653 0.09402 2.72% FabArray::ParallelCopy_finish() 41 0.04613 0.06654 0.09042 2.61% Castro::initialize_advance() 10 0.06454 0.07213 0.08283 2.39% FabArray::setVal() 143 0.06573 0.07252 0.0791 2.28% Castro::computeInitialDt() 2 0.002337 0.03765 0.07366 2.13% Castro::computeTemp() 63 0.06073 0.06441 0.06675 1.93% Castro::do_new_sources() 10 0.06038 0.06287 0.06451 1.86% Castro::reset_internal_energy(MultiFab) 63 0.04351 0.04619 0.04806 1.39% Castro::reset_internal_energy(Fab) 1008 0.04325 0.04591 0.04776 1.38% FabArray::ParallelCopy_nowait() 41 0.03695 0.04176 0.04499 1.30% Castro::normalize_species() 62 0.03638 0.03728 0.03822 1.10% StateDataPhysBCFunct::() 41 0.02741 0.03219 0.03551 1.03% StateData::FillBoundary(geom) 41 0.02726 0.03205 0.03537 1.02% Castro::construct_new_source() 50 0.02832 0.03031 0.03167 0.91% Gravity::interpolate_monopole_grav() 21 0.02556 0.02605 0.02674 0.77% Castro::construct_new_gravity_source() 10 0.0225 0.02395 0.02499 0.72% Castro::post_init() 1 0.02396 0.02417 0.02433 0.70% Amr::writePlotFile() 2 0.02368 0.0238 0.024 0.69% Castro::finalize_do_advance() 10 0.01552 0.01864 0.02254 0.65% Castro::post_timestep() 10 0.01424 0.0146 0.01475 0.43% FabArray::setDomainBndry() 41 0.007622 0.01148 0.01457 0.42% Castro::apply_source_to_state() 20 0.01119 0.01294 0.01442 0.42% FabArray::Saxpy() 20 0.01114 0.01289 0.01436 0.41% VisMF::Write(FabArray) 2 0.009297 0.01004 0.01365 0.39% Castro::check_for_nan() 20 0.009571 0.01177 0.01363 0.39% MultiFab::contains_nan() 20 0.009543 0.01174 0.0136 0.39% Castro::Castro() 1 0.01072 0.0111 0.01189 0.34% Castro::construct_old_source() 50 0.008246 0.009532 0.01065 0.31% Castro::construct_old_gravity_source() 10 0.008189 0.009463 0.01057 0.31% Castro::computeNewDt() 9 0.009269 0.009279 0.009292 0.27% Castro::initMFs() 1 0.006625 0.007069 0.008168 0.24% Other 265 0.02651 0.02985 0.03359 0.97% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8640 KiB 8651 KiB 8654 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6767 KiB 6773 KiB 6775 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7116 KiB 7125 KiB 7128 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4560 KiB 4576 KiB 4584 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 224 KiB 246 KiB 260 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2809 KiB 2812 KiB 2813 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 230 KiB 235 KiB 245 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 39 KiB 49 KiB 59 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2025 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 77 KiB 77 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 72 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-5-g005066b9e5ef) finalized