Initializing AMReX (26.01-9-g1a2a94866d37)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-9-g1a2a94866d37) initialized Starting run at 20:11:05 UTC on 2026-01-09. Successfully read inputs file ... Castro git describe: 26.01-4-gb2a4bef38 AMReX git describe: 26.01-9-g1a2a94866 Microphysics git describe: 26.01-4-g935d36be reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014573331 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.332087709 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.335825927 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.310364247 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.30990156 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.357244404 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.305273994 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.292828892 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.294094342 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.293007221 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.29346706 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.008176942 seconds Ending run at 20:11:08 UTC on 2026-01-09. Run time = 3.309974692 Run time without initialization = 3.137431722 Average number of zones advanced per microsecond: 0.836 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.3088 ... 3.3094 ... 3.3100 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1229 2.2117 2.2670 68.49% Gravity::make_radial_gravity() 21 0.2808 0.2865 0.3055 9.23% check_for_negative_density() 10 0.02945 0.08854 0.1805 5.45% Castro::estTimeStep() 21 0.02491 0.07024 0.1102 3.33% Castro::initData() 1 0.03343 0.06965 0.1092 3.30% FabArray::ParallelCopy_finish() 41 0.03627 0.04826 0.09317 2.81% amrex::Copy() 193 0.06277 0.07849 0.08712 2.63% FabArray::setVal() 143 0.05357 0.06605 0.07165 2.16% Castro::reset_internal_energy(Fab) 1008 0.03955 0.04511 0.048 1.45% FabArray::ParallelCopy_nowait() 41 0.03467 0.03998 0.04213 1.27% Castro::normalize_species() 62 0.03649 0.0371 0.03768 1.14% FillPatchIterator::Initialize 41 0.02732 0.03219 0.03433 1.04% StateData::FillBoundary(geom) 41 0.0264 0.03084 0.03339 1.01% Gravity::interpolate_monopole_grav() 21 0.02582 0.0262 0.02673 0.81% Castro::construct_new_gravity_source() 10 0.02229 0.02375 0.02591 0.78% Castro::computeTemp() 63 0.01659 0.01801 0.0189 0.57% Castro::initialize_do_advance() 10 0.0114 0.01635 0.01763 0.53% Castro::initialize_advance() 10 0.005301 0.01062 0.01383 0.42% FabArray::Saxpy() 20 0.01034 0.01268 0.0137 0.41% VisMF::Write(FabArray) 2 0.009287 0.00979 0.01286 0.39% MultiFab::contains_nan() 20 0.009574 0.01036 0.01142 0.35% FabArray::setDomainBndry() 41 0.007337 0.009948 0.01089 0.33% Amr::writePlotFile() 2 0.00791 0.01015 0.01065 0.32% Castro::construct_old_gravity_source() 10 0.006829 0.009622 0.01043 0.32% Castro::initMFs() 1 0.006569 0.007082 0.008339 0.25% Castro::construct_new_source() 50 0.00522 0.006066 0.006409 0.19% main() 1 0.003508 0.004293 0.004726 0.14% Gravity::get_new_grav_vector() 11 0.002643 0.003475 0.003843 0.12% Amr::coarseTimeStep() 10 0.0005299 0.001522 0.002603 0.08% Gravity::get_old_grav_vector() 10 0.001454 0.002026 0.002437 0.07% AmrLevel::FillPatch() 41 0.0008238 0.001075 0.001305 0.04% Castro::finalize_do_advance() 10 0.0006167 0.001146 0.001265 0.04% Amr::timeStep() 10 0.000137 0.0001786 0.0004107 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002517 0.0002602 0.0002695 0.01% Castro::do_advance_ctu() 10 0.0001421 0.0001594 0.0001865 0.01% Castro::clean_state() 62 0.0001346 0.0001516 0.0001644 0.00% StateDataPhysBCFunct::() 41 9.204e-05 0.0001111 0.0001224 0.00% FillPatchIterator::FillFromLevel0() 41 8.956e-05 0.0001006 0.0001086 0.00% Castro::do_old_sources() 10 6.622e-05 8.953e-05 0.0001086 0.00% Castro::Castro() 1 4.935e-05 7.454e-05 0.0001081 0.00% FabArray::ParallelCopy() 41 8.027e-05 8.534e-05 9.01e-05 0.00% Castro::construct_old_source() 50 5.5e-05 6.637e-05 7.696e-05 0.00% Castro::do_new_sources() 10 4.785e-05 6.011e-05 7.083e-05 0.00% Amr::FinalizeInit() 1 3.794e-06 1.322e-05 6.712e-05 0.00% FillPatchSingleLevel 41 6.114e-05 6.435e-05 6.626e-05 0.00% Castro::apply_source_to_state() 20 4.626e-05 5.205e-05 6.435e-05 0.00% Castro::subcycle_advance_ctu() 10 4.023e-05 4.769e-05 5.989e-05 0.00% Amr::defBaseLevel() 1 3.961e-05 5.244e-05 5.767e-05 0.00% Castro::construct_old_gravity() 10 3.556e-05 3.889e-05 4.437e-05 0.00% Castro::advance() 10 3.453e-05 4.028e-05 4.375e-05 0.00% Castro::construct_new_gravity() 10 2.92e-05 3.479e-05 4.236e-05 0.00% Castro::expand_state() 10 2.195e-05 2.623e-05 3.656e-05 0.00% Castro::check_for_nan() 20 2.287e-05 2.525e-05 2.917e-05 0.00% Castro::post_timestep() 10 1.521e-05 1.793e-05 2.426e-05 0.00% Castro::post_init() 1 1.544e-05 1.707e-05 1.97e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.877e-06 1.104e-05 1.369e-05 0.00% Castro::computeNewDt() 9 7.187e-06 9.292e-06 1.35e-05 0.00% Castro::computeInitialDt() 2 5.757e-06 7.121e-06 8.602e-06 0.00% Amr::InitializeInit() 1 2.957e-06 3.871e-06 6.177e-06 0.00% Amr::init() 1 2.257e-06 2.444e-06 2.706e-06 0.00% Amr::initialInit() 1 1.555e-06 1.986e-06 2.399e-06 0.00% Other 264 0.01501 0.01873 0.02073 0.63% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.309 3.309 3.31 100.00% Amr::coarseTimeStep() 10 3.125 3.125 3.125 94.40% Amr::timeStep() 10 3.111 3.113 3.114 94.07% Castro::advance() 10 3.098 3.098 3.098 93.61% Castro::subcycle_advance_ctu() 10 3.024 3.028 3.045 92.01% Castro::do_advance_ctu() 10 3.024 3.028 3.045 92.00% Castro::construct_ctu_hydro_source() 10 2.316 2.32 2.323 70.17% Gravity::make_radial_gravity() 21 0.297 0.3024 0.3182 9.61% AmrLevel::FillPatch() 41 0.1796 0.1943 0.2139 6.46% Gravity::get_new_grav_vector() 11 0.1999 0.2018 0.203 6.13% Castro::construct_old_gravity() 10 0.1746 0.1805 0.1931 5.83% Gravity::get_old_grav_vector() 10 0.1739 0.1798 0.1924 5.81% FillPatchIterator::Initialize 41 0.1486 0.1617 0.1894 5.72% check_for_negative_density() 10 0.02945 0.08854 0.1805 5.45% Castro::construct_new_gravity() 10 0.1783 0.1795 0.1805 5.45% Amr::init() 1 0.1711 0.1719 0.1722 5.20% Castro::initialize_do_advance() 10 0.1544 0.1599 0.1643 4.96% Amr::initialInit() 1 0.1564 0.1576 0.158 4.77% FillPatchIterator::FillFromLevel0() 41 0.1083 0.1195 0.1547 4.67% FillPatchSingleLevel 41 0.1082 0.1194 0.1546 4.67% Amr::InitializeInit() 1 0.05485 0.09094 0.1307 3.95% Amr::defBaseLevel() 1 0.05485 0.09094 0.1307 3.95% FabArray::ParallelCopy() 41 0.07659 0.08842 0.1281 3.87% Castro::expand_state() 10 0.1027 0.1091 0.1213 3.66% Castro::initData() 1 0.03713 0.0733 0.1125 3.40% Castro::clean_state() 62 0.09868 0.1058 0.1102 3.33% Castro::estTimeStep() 21 0.02491 0.07024 0.1102 3.33% Amr::FinalizeInit() 1 0.026 0.06665 0.1031 3.12% Castro::do_old_sources() 10 0.08777 0.09181 0.09639 2.91% FabArray::ParallelCopy_finish() 41 0.03627 0.04826 0.09317 2.81% amrex::Copy() 193 0.06277 0.07849 0.08712 2.63% Castro::computeInitialDt() 2 0.002278 0.04282 0.07918 2.39% FabArray::setVal() 143 0.05357 0.06605 0.07165 2.16% Castro::initialize_advance() 10 0.04892 0.06654 0.07123 2.15% Castro::do_new_sources() 10 0.05751 0.06182 0.06743 2.04% Castro::computeTemp() 63 0.0564 0.06338 0.06716 2.03% Castro::reset_internal_energy(MultiFab) 63 0.03981 0.04537 0.04826 1.46% Castro::reset_internal_energy(Fab) 1008 0.03955 0.04511 0.048 1.45% FabArray::ParallelCopy_nowait() 41 0.03479 0.04008 0.04221 1.28% Castro::normalize_species() 62 0.03649 0.0371 0.03768 1.14% StateDataPhysBCFunct::() 41 0.0265 0.03095 0.0335 1.01% StateData::FillBoundary(geom) 41 0.0264 0.03084 0.03339 1.01% Castro::construct_new_source() 50 0.02798 0.02982 0.03222 0.97% Gravity::interpolate_monopole_grav() 21 0.02582 0.0262 0.02673 0.81% Castro::construct_new_gravity_source() 10 0.02229 0.02375 0.02591 0.78% Castro::post_init() 1 0.02301 0.02349 0.02366 0.71% Castro::finalize_do_advance() 10 0.01356 0.01921 0.02299 0.69% Amr::writePlotFile() 2 0.0225 0.02262 0.02298 0.69% Castro::post_timestep() 10 0.01343 0.01425 0.01495 0.45% Castro::apply_source_to_state() 20 0.01039 0.01273 0.01377 0.42% FabArray::Saxpy() 20 0.01034 0.01268 0.0137 0.41% VisMF::Write(FabArray) 2 0.009287 0.00979 0.01286 0.39% Castro::Castro() 1 0.01043 0.01102 0.01185 0.36% Castro::check_for_nan() 20 0.009599 0.01039 0.01144 0.35% MultiFab::contains_nan() 20 0.009574 0.01036 0.01142 0.35% FabArray::setDomainBndry() 41 0.007337 0.009948 0.01089 0.33% Castro::construct_old_source() 50 0.006884 0.009688 0.01051 0.32% Castro::construct_old_gravity_source() 10 0.006829 0.009622 0.01043 0.32% Castro::computeNewDt() 9 0.009345 0.009369 0.009391 0.28% Castro::initMFs() 1 0.006569 0.007082 0.008339 0.25% AmrLevel::AmrLevel(dm) 1 0.005447 0.005667 0.006206 0.19% Other 264 0.01936 0.02432 0.02691 0.81% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8638 KiB 8650 KiB 8653 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6746 KiB 6750 KiB 6751 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7116 KiB 7124 KiB 7127 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4555 KiB 4561 KiB 4583 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 205 KiB 221 KiB 245 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2798 KiB 2802 KiB 2802 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 228 KiB 232 KiB 244 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 35 KiB 41 KiB 61 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2025 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 77 KiB 78 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 67 KiB 69 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-9-g1a2a94866d37) finalized