Initializing AMReX (26.01-9-g1a2a94866d37)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-9-g1a2a94866d37) initialized Starting run at 23:53:10 UTC on 2026-01-09. Successfully read inputs file ... Castro git describe: 26.01-4-g47bff3817 AMReX git describe: 26.01-9-g1a2a94866 Microphysics git describe: 26.01-5-g3ab4acc7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015540269 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.333935925 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.316055658 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.34226182 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.323153418 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.363781506 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.294794295 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.286114207 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.285142091 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.284482468 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.285492885 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007767722 seconds Ending run at 23:53:13 UTC on 2026-01-09. Run time = 3.296072556 Run time without initialization = 3.128419387 Average number of zones advanced per microsecond: 0.838 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.2942 ... 3.2950 ... 3.2961 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0628 2.1450 2.1945 66.58% Gravity::make_radial_gravity() 21 0.2962 0.306 0.321 9.74% check_for_negative_density() 10 0.05088 0.1042 0.1857 5.63% FabArray::ParallelCopy_finish() 41 0.03908 0.06746 0.1177 3.57% Castro::initData() 1 0.03527 0.07008 0.1014 3.08% Castro::estTimeStep() 21 0.02754 0.06118 0.09762 2.96% amrex::Copy() 193 0.06675 0.07976 0.09716 2.95% FabArray::setVal() 143 0.05195 0.0644 0.07363 2.23% Castro::reset_internal_energy(Fab) 1008 0.04129 0.04667 0.05648 1.71% FabArray::ParallelCopy_nowait() 41 0.0336 0.04004 0.04364 1.32% Castro::normalize_species() 62 0.03662 0.03756 0.03898 1.18% FillPatchIterator::Initialize 41 0.02732 0.0347 0.03862 1.17% StateData::FillBoundary(geom) 41 0.02786 0.03167 0.03572 1.08% Gravity::interpolate_monopole_grav() 21 0.02515 0.02586 0.02629 0.80% Castro::construct_new_gravity_source() 10 0.02214 0.02342 0.02503 0.76% Castro::computeTemp() 63 0.01685 0.01877 0.02297 0.70% FabArray::Saxpy() 20 0.01019 0.01318 0.01977 0.60% Castro::initialize_do_advance() 10 0.01136 0.01656 0.01782 0.54% Castro::initialize_advance() 10 0.0053 0.01046 0.01372 0.42% Amr::writePlotFile() 2 0.007814 0.01113 0.0131 0.40% VisMF::Write(FabArray) 2 0.008647 0.009749 0.01281 0.39% FabArray::setDomainBndry() 41 0.007481 0.01036 0.0125 0.38% MultiFab::contains_nan() 20 0.009695 0.01044 0.01143 0.35% Castro::construct_old_gravity_source() 10 0.006795 0.009254 0.01117 0.34% Castro::initMFs() 1 0.006538 0.007134 0.008303 0.25% Castro::construct_new_source() 50 0.005297 0.005882 0.006103 0.19% main() 1 0.003111 0.004102 0.004808 0.15% Gravity::get_new_grav_vector() 11 0.00271 0.003433 0.003842 0.12% Amr::coarseTimeStep() 10 0.001059 0.001791 0.002616 0.08% Gravity::get_old_grav_vector() 10 0.001674 0.002064 0.002414 0.07% Castro::finalize_do_advance() 10 0.0005485 0.001022 0.001237 0.04% AmrLevel::FillPatch() 41 0.0007739 0.001001 0.001117 0.03% Amr::timeStep() 10 0.0001277 0.0001768 0.0003902 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002565 0.0002852 0.0003829 0.01% Castro::do_advance_ctu() 10 0.0001416 0.0001781 0.0002301 0.01% Castro::clean_state() 62 0.0001393 0.0001652 0.0001811 0.01% StateDataPhysBCFunct::() 41 0.0001039 0.0001338 0.0001708 0.01% Castro::do_old_sources() 10 6.366e-05 0.0001038 0.0001484 0.00% FillPatchIterator::FillFromLevel0() 41 0.000102 0.0001098 0.0001242 0.00% FabArray::ParallelCopy() 41 7.549e-05 8.777e-05 0.0001072 0.00% Castro::Castro() 1 4.883e-05 6.265e-05 9.747e-05 0.00% FillPatchSingleLevel 41 6.456e-05 7.295e-05 8.739e-05 0.00% Castro::construct_old_source() 50 4.428e-05 6.815e-05 8.309e-05 0.00% Amr::FinalizeInit() 1 3.291e-06 1.352e-05 7.634e-05 0.00% Castro::do_new_sources() 10 4.869e-05 6.103e-05 6.924e-05 0.00% Castro::apply_source_to_state() 20 3.272e-05 4.897e-05 6.481e-05 0.00% Castro::construct_new_gravity() 10 3.121e-05 3.886e-05 6.046e-05 0.00% Castro::subcycle_advance_ctu() 10 4.668e-05 5.272e-05 5.774e-05 0.00% Amr::defBaseLevel() 1 3.98e-05 4.569e-05 4.79e-05 0.00% Castro::construct_old_gravity() 10 3.181e-05 3.968e-05 4.609e-05 0.00% Castro::advance() 10 3.216e-05 3.989e-05 4.486e-05 0.00% Castro::check_for_nan() 20 2.441e-05 2.649e-05 3.078e-05 0.00% Castro::expand_state() 10 2.06e-05 2.413e-05 2.83e-05 0.00% Castro::post_timestep() 10 1.403e-05 1.739e-05 2.117e-05 0.00% Castro::post_init() 1 1.493e-05 1.659e-05 1.834e-05 0.00% AmrLevel::AmrLevel(dm) 1 9.582e-06 1.317e-05 1.817e-05 0.00% Castro::computeNewDt() 9 8.808e-06 9.879e-06 1.093e-05 0.00% Amr::InitializeInit() 1 5.317e-06 6.379e-06 9.854e-06 0.00% Castro::computeInitialDt() 2 5.368e-06 6.64e-06 7.926e-06 0.00% Amr::init() 1 1.723e-06 2.05e-06 2.288e-06 0.00% Amr::initialInit() 1 1.371e-06 1.614e-06 1.929e-06 0.00% Other 264 0.01569 0.0188 0.02214 0.67% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.294 3.295 3.296 100.00% Amr::coarseTimeStep() 10 3.116 3.116 3.116 94.53% Amr::timeStep() 10 3.102 3.103 3.104 94.17% Castro::advance() 10 3.088 3.089 3.089 93.71% Castro::subcycle_advance_ctu() 10 3.014 3.02 3.034 92.05% Castro::do_advance_ctu() 10 3.014 3.02 3.034 92.05% Castro::construct_ctu_hydro_source() 10 2.264 2.269 2.272 68.94% Gravity::make_radial_gravity() 21 0.3128 0.322 0.3336 10.12% AmrLevel::FillPatch() 41 0.2002 0.2173 0.2461 7.47% FillPatchIterator::Initialize 41 0.1648 0.1847 0.2171 6.59% Gravity::get_new_grav_vector() 11 0.2116 0.2123 0.213 6.46% Castro::construct_old_gravity() 10 0.1841 0.1906 0.1989 6.04% Gravity::get_old_grav_vector() 10 0.1834 0.1899 0.1983 6.02% Castro::construct_new_gravity() 10 0.1867 0.1871 0.1875 5.69% check_for_negative_density() 10 0.05088 0.1042 0.1857 5.63% FillPatchIterator::FillFromLevel0() 41 0.1157 0.1397 0.1823 5.53% FillPatchSingleLevel 41 0.1156 0.1396 0.1822 5.53% Castro::initialize_do_advance() 10 0.1564 0.1626 0.1681 5.10% Amr::init() 1 0.1662 0.1669 0.1673 5.08% Amr::initialInit() 1 0.1508 0.1513 0.1518 4.60% FabArray::ParallelCopy() 41 0.08095 0.1077 0.1514 4.59% Castro::expand_state() 10 0.1049 0.1115 0.125 3.79% Amr::InitializeInit() 1 0.05665 0.09116 0.1218 3.70% Amr::defBaseLevel() 1 0.05665 0.09115 0.1218 3.70% Castro::do_old_sources() 10 0.1044 0.1137 0.12 3.64% Castro::clean_state() 62 0.09993 0.1087 0.1199 3.64% FabArray::ParallelCopy_finish() 41 0.03908 0.06746 0.1177 3.57% Castro::initData() 1 0.03843 0.07364 0.1047 3.18% Castro::estTimeStep() 21 0.02754 0.06118 0.09762 2.96% amrex::Copy() 193 0.06675 0.07976 0.09716 2.95% Amr::FinalizeInit() 1 0.02929 0.06014 0.09468 2.87% Castro::computeTemp() 63 0.05841 0.06572 0.07639 2.32% FabArray::setVal() 143 0.05195 0.0644 0.07363 2.23% Castro::initialize_advance() 10 0.05065 0.06566 0.07172 2.18% Castro::computeInitialDt() 2 0.002431 0.03346 0.06809 2.07% Castro::do_new_sources() 10 0.05447 0.0608 0.06546 1.99% Castro::reset_internal_energy(MultiFab) 63 0.04156 0.04696 0.05686 1.73% Castro::reset_internal_energy(Fab) 1008 0.04129 0.04667 0.05648 1.71% FabArray::ParallelCopy_nowait() 41 0.03371 0.04013 0.04375 1.33% Castro::normalize_species() 62 0.03662 0.03756 0.03898 1.18% StateDataPhysBCFunct::() 41 0.028 0.0318 0.03584 1.09% StateData::FillBoundary(geom) 41 0.02786 0.03167 0.03572 1.08% Castro::construct_new_source() 50 0.02743 0.0293 0.03109 0.94% Castro::post_init() 1 0.02611 0.02645 0.02681 0.81% Gravity::interpolate_monopole_grav() 21 0.02515 0.02586 0.02629 0.80% Castro::finalize_do_advance() 10 0.014 0.01908 0.0258 0.78% Castro::construct_new_gravity_source() 10 0.02214 0.02342 0.02503 0.76% Amr::writePlotFile() 2 0.02308 0.02343 0.0236 0.72% Castro::apply_source_to_state() 20 0.01022 0.01323 0.01984 0.60% FabArray::Saxpy() 20 0.01019 0.01318 0.01977 0.60% Castro::post_timestep() 10 0.01411 0.0145 0.01507 0.46% VisMF::Write(FabArray) 2 0.008647 0.009749 0.01281 0.39% FabArray::setDomainBndry() 41 0.007481 0.01036 0.0125 0.38% Castro::Castro() 1 0.01022 0.01088 0.01172 0.36% Castro::check_for_nan() 20 0.009721 0.01047 0.01146 0.35% MultiFab::contains_nan() 20 0.009695 0.01044 0.01143 0.35% Castro::construct_old_source() 50 0.006839 0.009323 0.01124 0.34% Castro::construct_old_gravity_source() 10 0.006795 0.009254 0.01117 0.34% Castro::computeNewDt() 9 0.009663 0.009669 0.009682 0.29% Castro::initMFs() 1 0.006538 0.007134 0.008303 0.25% AmrLevel::AmrLevel(dm) 1 0.005346 0.005821 0.006832 0.21% Other 264 0.01995 0.02426 0.02885 0.88% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8639 KiB 8649 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6751 KiB 6758 KiB 6763 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7116 KiB 7124 KiB 7125 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4559 KiB 4568 KiB 4592 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 225 KiB 244 KiB 278 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2802 KiB 2805 KiB 2805 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 241 KiB 248 KiB 257 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 38 KiB 48 KiB 69 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 82 KiB 82 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 71 KiB 73 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-9-g1a2a94866d37) finalized