Initializing AMReX (26.01-10-gd9a7e5ddffe5)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-10-gd9a7e5ddffe5) initialized Starting run at 22:42:30 UTC on 2026-01-10. Successfully read inputs file ... Castro git describe: 26.01-4-g47bff3817 AMReX git describe: 26.01-10-gd9a7e5ddf Microphysics git describe: 26.01-5-g3ab4acc7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014865052 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.330140889 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.322399546 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.301365003 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.301305598 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.35289538 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.296518928 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.285667679 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.287285573 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.287542651 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.28804901 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007561487 seconds Ending run at 22:42:34 UTC on 2026-01-10. Run time = 3.231423816 Run time without initialization = 3.06593554 Average number of zones advanced per microsecond: 0.855 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2298 ... 3.2307 ... 3.2315 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0430 2.1380 2.1971 67.99% Gravity::make_radial_gravity() 21 0.2772 0.2831 0.3022 9.35% check_for_negative_density() 10 0.03826 0.09739 0.1955 6.05% Castro::estTimeStep() 21 0.02382 0.06376 0.1021 3.16% Castro::initData() 1 0.0331 0.06843 0.1018 3.15% FabArray::ParallelCopy_finish() 41 0.03559 0.04673 0.0858 2.66% amrex::Copy() 193 0.06224 0.07769 0.08538 2.64% FabArray::setVal() 143 0.0555 0.06744 0.07343 2.27% Castro::reset_internal_energy(Fab) 1008 0.0424 0.04496 0.04786 1.48% FabArray::ParallelCopy_nowait() 41 0.03479 0.03969 0.04185 1.30% Castro::normalize_species() 62 0.03631 0.03663 0.03754 1.16% FillPatchIterator::Initialize 41 0.02727 0.03193 0.03431 1.06% StateData::FillBoundary(geom) 41 0.02606 0.03035 0.03269 1.01% Castro::construct_new_gravity_source() 10 0.02219 0.02412 0.0264 0.82% Gravity::interpolate_monopole_grav() 21 0.02533 0.02567 0.02587 0.80% Castro::computeTemp() 63 0.01713 0.01774 0.01843 0.57% Castro::initialize_do_advance() 10 0.01164 0.01606 0.0175 0.54% FabArray::Saxpy() 20 0.0107 0.01272 0.01378 0.43% VisMF::Write(FabArray) 2 0.00939 0.01004 0.01346 0.42% Castro::initialize_advance() 10 0.005284 0.01063 0.01343 0.42% MultiFab::contains_nan() 20 0.009382 0.01041 0.01148 0.36% FabArray::setDomainBndry() 41 0.007657 0.009718 0.01078 0.33% Castro::construct_old_gravity_source() 10 0.006997 0.009576 0.01017 0.31% Amr::writePlotFile() 2 0.0072 0.009646 0.01016 0.31% Castro::initMFs() 1 0.006449 0.006889 0.008164 0.25% Castro::enforce_min_density() 62 0.005705 0.006069 0.006372 0.20% Castro::construct_new_source() 50 0.00534 0.006085 0.006367 0.20% main() 1 0.003927 0.004444 0.004724 0.15% Gravity::get_new_grav_vector() 11 0.002781 0.003431 0.00376 0.12% Amr::coarseTimeStep() 10 0.0008105 0.002066 0.002887 0.09% Gravity::get_old_grav_vector() 10 0.001465 0.002039 0.002444 0.08% Castro::finalize_do_advance() 10 0.0005664 0.001349 0.002116 0.07% AmrLevel::FillPatch() 41 0.0007462 0.001043 0.001245 0.04% Amr::timeStep() 10 0.000126 0.0001779 0.0003672 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002589 0.0002734 0.0003186 0.01% Castro::do_advance_ctu() 10 0.0001567 0.0001701 0.0001958 0.01% Castro::clean_state() 62 0.0001402 0.0001562 0.0001687 0.01% StateDataPhysBCFunct::() 41 0.0001022 0.0001186 0.0001336 0.00% FillPatchIterator::FillFromLevel0() 41 9.439e-05 0.000106 0.0001141 0.00% Castro::do_old_sources() 10 6.988e-05 8.874e-05 0.0001072 0.00% Castro::Castro() 1 5.198e-05 8.146e-05 9.974e-05 0.00% FabArray::ParallelCopy() 41 7.318e-05 8.55e-05 9.304e-05 0.00% Amr::FinalizeInit() 1 4.142e-06 1.549e-05 8.881e-05 0.00% FillPatchSingleLevel 41 6.888e-05 7.536e-05 8.645e-05 0.00% Castro::construct_old_source() 50 4.757e-05 6.574e-05 7.548e-05 0.00% Castro::do_new_sources() 10 5.043e-05 6.331e-05 7.145e-05 0.00% Castro::apply_source_to_state() 20 3.851e-05 5.128e-05 6.779e-05 0.00% Castro::subcycle_advance_ctu() 10 4.277e-05 4.963e-05 6.406e-05 0.00% Castro::construct_old_gravity() 10 3.192e-05 4.01e-05 5.12e-05 0.00% Amr::defBaseLevel() 1 3.898e-05 4.364e-05 4.916e-05 0.00% Castro::advance() 10 3.438e-05 4e-05 4.853e-05 0.00% Castro::construct_new_gravity() 10 2.918e-05 3.295e-05 4.12e-05 0.00% Castro::expand_state() 10 1.965e-05 2.411e-05 3.814e-05 0.00% Castro::check_for_nan() 20 2.327e-05 2.684e-05 3.769e-05 0.00% Castro::post_init() 1 1.409e-05 1.767e-05 2.184e-05 0.00% Castro::post_timestep() 10 1.461e-05 1.753e-05 1.998e-05 0.00% Castro::computeNewDt() 9 8.94e-06 9.467e-06 1.021e-05 0.00% Amr::InitializeInit() 1 5.339e-06 6.337e-06 8.957e-06 0.00% Castro::computeInitialDt() 2 4.949e-06 6.843e-06 8.503e-06 0.00% Amr::init() 1 2.022e-06 2.326e-06 2.576e-06 0.00% Amr::initialInit() 1 1.375e-06 1.906e-06 2.302e-06 0.00% Other 203 0.009367 0.01307 0.01488 0.46% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.23 3.231 3.231 100.00% Amr::coarseTimeStep() 10 3.054 3.054 3.054 94.50% Amr::timeStep() 10 3.04 3.041 3.042 94.15% Castro::advance() 10 3.026 3.027 3.028 93.69% Castro::subcycle_advance_ctu() 10 2.952 2.956 2.972 91.98% Castro::do_advance_ctu() 10 2.952 2.956 2.972 91.98% Castro::construct_ctu_hydro_source() 10 2.251 2.255 2.257 69.85% Gravity::make_radial_gravity() 21 0.2934 0.2988 0.3151 9.75% AmrLevel::FillPatch() 41 0.1781 0.1908 0.2058 6.37% Gravity::get_new_grav_vector() 11 0.198 0.2002 0.2015 6.24% check_for_negative_density() 10 0.03826 0.09739 0.1955 6.05% Castro::construct_old_gravity() 10 0.1724 0.1777 0.1917 5.93% Gravity::get_old_grav_vector() 10 0.1718 0.177 0.1911 5.91% FillPatchIterator::Initialize 41 0.1471 0.1589 0.182 5.63% Castro::construct_new_gravity() 10 0.1775 0.1783 0.1789 5.54% Amr::init() 1 0.1639 0.1647 0.1652 5.11% Castro::initialize_do_advance() 10 0.1513 0.1562 0.1594 4.93% Amr::initialInit() 1 0.1488 0.15 0.1506 4.66% FillPatchIterator::FillFromLevel0() 41 0.1067 0.1172 0.1471 4.55% FillPatchSingleLevel 41 0.1066 0.1171 0.147 4.55% Amr::InitializeInit() 1 0.05516 0.09006 0.1243 3.85% Amr::defBaseLevel() 1 0.05515 0.09006 0.1243 3.85% FabArray::ParallelCopy() 41 0.07621 0.08659 0.1208 3.74% Castro::expand_state() 10 0.09959 0.1062 0.1144 3.54% Castro::clean_state() 62 0.1015 0.105 0.1098 3.40% Castro::initData() 1 0.03671 0.0721 0.1055 3.27% Castro::estTimeStep() 21 0.02382 0.06376 0.1021 3.16% Castro::do_old_sources() 10 0.08783 0.09158 0.09583 2.97% Amr::FinalizeInit() 1 0.02627 0.05994 0.0954 2.95% FabArray::ParallelCopy_finish() 41 0.03559 0.04673 0.0858 2.66% amrex::Copy() 193 0.06224 0.07769 0.08538 2.64% FabArray::setVal() 143 0.0555 0.06744 0.07343 2.27% Castro::computeInitialDt() 2 0.002592 0.0364 0.07177 2.22% Castro::initialize_advance() 10 0.05034 0.06703 0.07148 2.21% Castro::do_new_sources() 10 0.05757 0.06234 0.06837 2.12% Castro::computeTemp() 63 0.05981 0.06297 0.06661 2.06% Castro::reset_internal_energy(MultiFab) 63 0.04266 0.04523 0.04818 1.49% Castro::reset_internal_energy(Fab) 1008 0.0424 0.04496 0.04786 1.48% FabArray::ParallelCopy_nowait() 41 0.03489 0.03978 0.04194 1.30% Castro::normalize_species() 62 0.03631 0.03663 0.03754 1.16% StateDataPhysBCFunct::() 41 0.02616 0.03047 0.03281 1.02% Castro::construct_new_source() 50 0.02753 0.0302 0.03275 1.01% StateData::FillBoundary(geom) 41 0.02606 0.03035 0.03269 1.01% Castro::construct_new_gravity_source() 10 0.02219 0.02412 0.0264 0.82% Gravity::interpolate_monopole_grav() 21 0.02533 0.02567 0.02587 0.80% Castro::finalize_do_advance() 10 0.01378 0.01945 0.02371 0.73% Castro::post_init() 1 0.02301 0.02343 0.02357 0.73% Amr::writePlotFile() 2 0.0222 0.02233 0.02268 0.70% Castro::post_timestep() 10 0.01365 0.01425 0.01496 0.46% Castro::apply_source_to_state() 20 0.01074 0.01277 0.01383 0.43% FabArray::Saxpy() 20 0.0107 0.01272 0.01378 0.43% VisMF::Write(FabArray) 2 0.00939 0.01004 0.01346 0.42% Castro::Castro() 1 0.01062 0.0111 0.01209 0.37% Castro::check_for_nan() 20 0.009409 0.01043 0.01151 0.36% MultiFab::contains_nan() 20 0.009382 0.01041 0.01148 0.36% FabArray::setDomainBndry() 41 0.007657 0.009718 0.01078 0.33% Castro::construct_old_source() 50 0.007044 0.009641 0.01024 0.32% Castro::construct_old_gravity_source() 10 0.006997 0.009576 0.01017 0.31% Castro::computeNewDt() 9 0.009255 0.009273 0.009293 0.29% Castro::initMFs() 1 0.006449 0.006889 0.008164 0.25% Castro::enforce_min_density() 62 0.005705 0.006069 0.006372 0.20% Other 203 0.01936 0.02456 0.02745 0.85% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 5 B 7 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8636 KiB 8648 KiB 8651 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6752 KiB 6755 KiB 6757 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7115 KiB 7124 KiB 7126 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4554 KiB 4561 KiB 4582 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 207 KiB 221 KiB 240 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 17 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2800 KiB 2803 KiB 2805 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 230 KiB 235 KiB 248 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 41 KiB 58 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 78 KiB 79 KiB 79 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 70 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-10-gd9a7e5ddffe5) finalized