Initializing AMReX (26.01-10-gd9a7e5ddffe5)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-10-gd9a7e5ddffe5) initialized Starting run at 20:13:14 UTC on 2026-01-10. Successfully read inputs file ... Castro git describe: 26.01-4-g47bff3817 AMReX git describe: 26.01-10-gd9a7e5ddf Microphysics git describe: 26.01-9-gfe6f0939 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014991057 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.324084691 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.332165114 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.304982834 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.304017288 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.35213674 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.295794289 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.283961184 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.288202136 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.286558644 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.286288817 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007663128 seconds Ending run at 20:13:17 UTC on 2026-01-10. Run time = 3.242569092 Run time without initialization = 3.070729272 Average number of zones advanced per microsecond: 0.854 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2397 ... 3.2417 ... 3.2430 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1015 2.1479 2.2085 68.10% Gravity::make_radial_gravity() 21 0.2829 0.2921 0.311 9.59% check_for_negative_density() 10 0.0183 0.08114 0.13 4.01% Castro::initData() 1 0.03378 0.06848 0.1038 3.20% Castro::estTimeStep() 21 0.02574 0.06564 0.1005 3.10% FabArray::ParallelCopy_finish() 41 0.03625 0.0496 0.09071 2.80% amrex::Copy() 193 0.06309 0.07818 0.08646 2.67% FabArray::setVal() 143 0.05451 0.06582 0.0709 2.19% Castro::reset_internal_energy(Fab) 1008 0.04104 0.04457 0.04801 1.48% FabArray::ParallelCopy_nowait() 41 0.03467 0.03988 0.04217 1.30% Castro::normalize_species() 62 0.03659 0.0372 0.03824 1.18% FillPatchIterator::Initialize 41 0.02738 0.03192 0.03449 1.06% StateData::FillBoundary(geom) 41 0.02662 0.03089 0.03345 1.03% Castro::construct_new_gravity_source() 10 0.02259 0.02414 0.02662 0.82% Gravity::interpolate_monopole_grav() 21 0.02554 0.02581 0.02625 0.81% Castro::computeTemp() 63 0.01693 0.01775 0.01893 0.58% Castro::initialize_do_advance() 10 0.0116 0.01625 0.01765 0.54% Castro::initialize_advance() 10 0.005347 0.01085 0.01422 0.44% FabArray::Saxpy() 20 0.01053 0.01253 0.01371 0.42% VisMF::Write(FabArray) 2 0.009323 0.00998 0.01355 0.42% MultiFab::contains_nan() 20 0.009341 0.01035 0.01188 0.37% FabArray::setDomainBndry() 41 0.007633 0.009903 0.01112 0.34% Castro::initMFs() 1 0.006335 0.007846 0.01061 0.33% Castro::construct_old_gravity_source() 10 0.007087 0.009687 0.01054 0.33% Amr::writePlotFile() 2 0.00731 0.009798 0.01033 0.32% StateData::define() 4 0.005305 0.00653 0.008477 0.26% Castro::construct_new_source() 50 0.005278 0.006043 0.006459 0.20% main() 1 0.003287 0.004126 0.004391 0.14% Gravity::get_new_grav_vector() 11 0.002892 0.003405 0.003735 0.12% Amr::coarseTimeStep() 10 0.001004 0.002031 0.002833 0.09% Gravity::get_old_grav_vector() 10 0.001472 0.001998 0.002375 0.07% Castro::finalize_do_advance() 10 0.000587 0.001163 0.001497 0.05% AmrLevel::FillPatch() 41 0.0008394 0.001245 0.001383 0.04% Amr::timeStep() 10 0.0001345 0.000178 0.0003669 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002537 0.0002757 0.000305 0.01% Castro::do_advance_ctu() 10 0.0001647 0.0001828 0.0002072 0.01% Castro::clean_state() 62 0.0001386 0.0001499 0.0001606 0.00% StateDataPhysBCFunct::() 41 9.385e-05 0.0001203 0.0001362 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001028 0.000113 0.0001318 0.00% Castro::do_old_sources() 10 5.953e-05 8.766e-05 0.0001072 0.00% FabArray::ParallelCopy() 41 7.636e-05 8.658e-05 9.598e-05 0.00% Castro::do_new_sources() 10 5.047e-05 6.594e-05 9.072e-05 0.00% Castro::Castro() 1 4.331e-05 5.629e-05 8.988e-05 0.00% FillPatchSingleLevel 41 7.063e-05 7.539e-05 8.072e-05 0.00% Amr::FinalizeInit() 1 4.014e-06 1.392e-05 7.968e-05 0.00% Castro::construct_old_source() 50 4.368e-05 6.747e-05 7.462e-05 0.00% Amr::defBaseLevel() 1 4.167e-05 5.108e-05 7.268e-05 0.00% Castro::apply_source_to_state() 20 3.481e-05 4.69e-05 6.38e-05 0.00% Castro::subcycle_advance_ctu() 10 4.759e-05 5.18e-05 5.421e-05 0.00% Castro::advance() 10 3.413e-05 4.026e-05 4.886e-05 0.00% Castro::construct_old_gravity() 10 3.293e-05 3.971e-05 4.48e-05 0.00% Castro::construct_new_gravity() 10 3.162e-05 3.663e-05 4.254e-05 0.00% Castro::check_for_nan() 20 2.416e-05 2.567e-05 2.747e-05 0.00% Castro::expand_state() 10 1.971e-05 2.337e-05 2.718e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.132e-05 1.494e-05 2.285e-05 0.00% Castro::post_timestep() 10 1.43e-05 1.663e-05 1.855e-05 0.00% Castro::post_init() 1 1.482e-05 1.626e-05 1.808e-05 0.00% Castro::computeNewDt() 9 8.597e-06 9.972e-06 1.097e-05 0.00% Amr::InitializeInit() 1 5.126e-06 6.669e-06 9.266e-06 0.00% Castro::computeInitialDt() 2 5.825e-06 6.624e-06 7.949e-06 0.00% Amr::init() 1 1.945e-06 2.496e-06 3.11e-06 0.00% Amr::initialInit() 1 1.262e-06 1.928e-06 2.638e-06 0.00% Other 260 0.009435 0.01516 0.01821 0.56% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.24 3.242 3.243 100.00% Amr::coarseTimeStep() 10 3.059 3.059 3.059 94.32% Amr::timeStep() 10 3.045 3.046 3.047 93.96% Castro::advance() 10 3.031 3.032 3.032 93.50% Castro::subcycle_advance_ctu() 10 2.956 2.961 2.978 91.81% Castro::do_advance_ctu() 10 2.956 2.961 2.978 91.81% Castro::construct_ctu_hydro_source() 10 2.245 2.248 2.25 69.39% Gravity::make_radial_gravity() 21 0.299 0.308 0.324 9.99% AmrLevel::FillPatch() 41 0.1804 0.1952 0.2121 6.54% Gravity::get_new_grav_vector() 11 0.2061 0.2077 0.2099 6.47% Castro::construct_old_gravity() 10 0.1734 0.1799 0.1936 5.97% Gravity::get_old_grav_vector() 10 0.1726 0.1792 0.193 5.95% FillPatchIterator::Initialize 41 0.1483 0.1627 0.1875 5.78% Castro::construct_new_gravity() 10 0.1819 0.183 0.1844 5.69% Amr::init() 1 0.1682 0.1708 0.1721 5.31% Castro::initialize_do_advance() 10 0.1519 0.159 0.1625 5.01% Amr::initialInit() 1 0.1531 0.1561 0.1576 4.86% FillPatchIterator::FillFromLevel0() 41 0.1092 0.1209 0.1525 4.70% FillPatchSingleLevel 41 0.1091 0.1207 0.1524 4.70% check_for_negative_density() 10 0.0183 0.08114 0.13 4.01% Amr::InitializeInit() 1 0.05901 0.0923 0.128 3.95% Amr::defBaseLevel() 1 0.059 0.0923 0.128 3.95% FabArray::ParallelCopy() 41 0.07773 0.08965 0.1256 3.87% Castro::expand_state() 10 0.1012 0.1088 0.1186 3.66% Castro::clean_state() 62 0.1003 0.1051 0.1112 3.43% Castro::initData() 1 0.03716 0.07185 0.1072 3.31% Castro::estTimeStep() 21 0.02574 0.06564 0.1005 3.10% Castro::do_old_sources() 10 0.08858 0.09302 0.0953 2.94% Amr::FinalizeInit() 1 0.02863 0.06379 0.0941 2.90% FabArray::ParallelCopy_finish() 41 0.03625 0.0496 0.09071 2.80% amrex::Copy() 193 0.06309 0.07818 0.08646 2.67% Castro::initialize_advance() 10 0.05028 0.06732 0.07299 2.25% FabArray::setVal() 143 0.05451 0.06582 0.0709 2.19% Castro::computeInitialDt() 2 0.002275 0.03742 0.06816 2.10% Castro::do_new_sources() 10 0.0582 0.06204 0.06809 2.10% Castro::computeTemp() 63 0.05828 0.0626 0.06725 2.07% Castro::reset_internal_energy(MultiFab) 63 0.0413 0.04485 0.04832 1.49% Castro::reset_internal_energy(Fab) 1008 0.04104 0.04457 0.04801 1.48% FabArray::ParallelCopy_nowait() 41 0.03479 0.03997 0.04226 1.30% Castro::normalize_species() 62 0.03659 0.0372 0.03824 1.18% StateDataPhysBCFunct::() 41 0.02672 0.03101 0.03357 1.04% StateData::FillBoundary(geom) 41 0.02662 0.03089 0.03345 1.03% Castro::construct_new_source() 50 0.02828 0.03018 0.03308 1.02% Castro::construct_new_gravity_source() 10 0.02259 0.02414 0.02662 0.82% Castro::post_init() 1 0.02579 0.02604 0.02628 0.81% Gravity::interpolate_monopole_grav() 21 0.02554 0.02581 0.02625 0.81% Castro::finalize_do_advance() 10 0.01377 0.01991 0.02416 0.74% Amr::writePlotFile() 2 0.02216 0.02243 0.02288 0.71% Castro::post_timestep() 10 0.01366 0.0142 0.01507 0.46% Castro::Castro() 1 0.009205 0.01126 0.01423 0.44% Castro::apply_source_to_state() 20 0.01057 0.01257 0.01376 0.42% FabArray::Saxpy() 20 0.01053 0.01253 0.01371 0.42% VisMF::Write(FabArray) 2 0.009323 0.00998 0.01355 0.42% Castro::check_for_nan() 20 0.009366 0.01037 0.01191 0.37% MultiFab::contains_nan() 20 0.009341 0.01035 0.01188 0.37% FabArray::setDomainBndry() 41 0.007633 0.009903 0.01112 0.34% Castro::construct_old_source() 50 0.007131 0.009755 0.01061 0.33% Castro::initMFs() 1 0.006335 0.007846 0.01061 0.33% Castro::construct_old_gravity_source() 10 0.007087 0.009687 0.01054 0.33% Castro::computeNewDt() 9 0.009476 0.009495 0.009515 0.29% AmrLevel::AmrLevel(dm) 1 0.005317 0.006545 0.008497 0.26% StateData::define() 4 0.005305 0.00653 0.008477 0.26% Other 260 0.0137 0.02243 0.02723 0.84% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8622 KiB 8638 KiB 8646 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6739 KiB 6742 KiB 6743 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7109 KiB 7118 KiB 7120 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4544 KiB 4552 KiB 4573 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 208 KiB 226 KiB 247 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2794 KiB 2798 KiB 2799 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 234 KiB 241 KiB 254 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 42 KiB 60 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2019 KiB 2022 KiB 2023 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 82 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 70 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-10-gd9a7e5ddffe5) finalized