Initializing AMReX (26.01-10-gd9a7e5ddffe5)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-10-gd9a7e5ddffe5) initialized Starting run at 19:26:06 UTC on 2026-01-11. Successfully read inputs file ... Castro git describe: 26.01-7-g06729c30f AMReX git describe: 26.01-10-gd9a7e5ddf Microphysics git describe: 26.01-8-ge2108327 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014539507 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.323732035 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.329759276 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.300748285 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.301924048 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.358327441 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.294638166 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.286409499 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.286698305 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.286478808 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.283710724 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007584203 seconds Ending run at 19:26:10 UTC on 2026-01-11. Run time = 3.292244657 Run time without initialization = 3.065208737 Average number of zones advanced per microsecond: 0.855 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2878 ... 3.2899 ... 3.2928 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0683 2.1138 2.1602 65.60% Gravity::make_radial_gravity() 21 0.2897 0.2939 0.3091 9.39% check_for_negative_density() 10 0.04079 0.0897 0.1336 4.06% Castro::estTimeStep() 21 0.02753 0.0737 0.1093 3.32% Castro::initData() 1 0.0331 0.0698 0.1089 3.31% FabArray::ParallelCopy_finish() 41 0.03775 0.06272 0.1079 3.28% amrex::Copy() 193 0.0632 0.07852 0.09039 2.75% FabArray::setVal() 143 0.05514 0.06648 0.07489 2.27% Amr::InitAmr() 1 0.0001862 0.006862 0.05314 1.61% DistributionMapping::LeastUsedCPUs() 1 3.533e-05 0.04386 0.05219 1.59% Castro::reset_internal_energy(Fab) 1008 0.04396 0.0455 0.04645 1.41% FabArray::ParallelCopy_nowait() 41 0.03439 0.03874 0.04041 1.23% FillPatchIterator::Initialize 41 0.02803 0.03344 0.03861 1.17% Castro::normalize_species() 62 0.03383 0.03488 0.0362 1.10% StateData::FillBoundary(geom) 41 0.02711 0.03058 0.03226 0.98% Gravity::interpolate_monopole_grav() 21 0.02545 0.02603 0.02672 0.81% Castro::construct_new_gravity_source() 10 0.02252 0.02366 0.02515 0.76% Castro::computeTemp() 63 0.01753 0.01806 0.01888 0.57% Castro::construct_old_gravity_source() 10 0.006865 0.01139 0.01866 0.57% Castro::initialize_do_advance() 10 0.01176 0.01578 0.01756 0.53% FabArray::Saxpy() 20 0.01071 0.01326 0.01666 0.51% Castro::initialize_advance() 10 0.005345 0.01081 0.01408 0.43% VisMF::Write(FabArray) 2 0.009113 0.009803 0.01305 0.40% FabArray::setDomainBndry() 41 0.00773 0.01044 0.01288 0.39% MultiFab::contains_nan() 20 0.009254 0.01048 0.0119 0.36% Castro::initMFs() 1 0.006376 0.007556 0.01044 0.32% Amr::writePlotFile() 2 0.007254 0.009601 0.01029 0.31% Castro::construct_new_source() 50 0.005548 0.006068 0.006463 0.20% main() 1 0.003879 0.004206 0.004551 0.14% Gravity::get_new_grav_vector() 11 0.002982 0.003416 0.003746 0.11% Gravity::get_old_grav_vector() 10 0.001493 0.002045 0.002465 0.07% Amr::coarseTimeStep() 10 0.00125 0.001875 0.002261 0.07% Castro::finalize_do_advance() 10 0.0005976 0.001271 0.001857 0.06% AmrLevel::FillPatch() 41 0.0008254 0.0009798 0.001207 0.04% Amr::timeStep() 10 0.0001335 0.0001825 0.0004049 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002598 0.0002716 0.0002831 0.01% Castro::do_advance_ctu() 10 0.0001473 0.0001791 0.0002395 0.01% Castro::clean_state() 62 0.0001406 0.0001598 0.0001733 0.01% Castro::do_old_sources() 10 7.501e-05 9.964e-05 0.000142 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001052 0.0001186 0.0001343 0.00% StateDataPhysBCFunct::() 41 0.0001085 0.0001189 0.000126 0.00% FillPatchSingleLevel 41 7.061e-05 7.955e-05 9.821e-05 0.00% Castro::construct_old_source() 50 5.165e-05 7.839e-05 9.364e-05 0.00% FabArray::ParallelCopy() 41 7.924e-05 8.554e-05 9.269e-05 0.00% Castro::Castro() 1 4.17e-05 5.127e-05 7.577e-05 0.00% Amr::defBaseLevel() 1 4.667e-05 5.579e-05 7.559e-05 0.00% Castro::do_new_sources() 10 5.206e-05 6.289e-05 7.275e-05 0.00% Castro::apply_source_to_state() 20 3.944e-05 5.451e-05 6.775e-05 0.00% Amr::FinalizeInit() 1 3.888e-06 1.211e-05 6.58e-05 0.00% Castro::subcycle_advance_ctu() 10 4.296e-05 5.422e-05 6.246e-05 0.00% Castro::advance() 10 3.507e-05 4.533e-05 5.733e-05 0.00% Castro::construct_old_gravity() 10 3.238e-05 3.89e-05 4.992e-05 0.00% Castro::construct_new_gravity() 10 2.908e-05 3.537e-05 4.861e-05 0.00% Castro::check_for_nan() 20 2.233e-05 2.523e-05 2.975e-05 0.00% Castro::expand_state() 10 1.893e-05 2.345e-05 2.901e-05 0.00% Castro::post_timestep() 10 1.491e-05 1.846e-05 2.598e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.063e-05 1.53e-05 2.158e-05 0.00% Castro::post_init() 1 1.546e-05 1.726e-05 2.028e-05 0.00% Amr::InitializeInit() 1 5.489e-06 7.513e-06 1.387e-05 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.411e-06 5.886e-06 1.12e-05 0.00% Castro::computeNewDt() 9 8.437e-06 9.177e-06 9.995e-06 0.00% Castro::computeInitialDt() 2 5.321e-06 6.863e-06 8.751e-06 0.00% Amr::init() 1 1.85e-06 2.322e-06 2.703e-06 0.00% Amr::initialInit() 1 1.454e-06 1.784e-06 1.943e-06 0.00% Other 261 0.01466 0.01885 0.02176 0.66% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.288 3.29 3.293 100.00% Amr::coarseTimeStep() 10 3.053 3.053 3.053 92.72% Amr::timeStep() 10 3.04 3.04 3.041 92.35% Castro::advance() 10 3.026 3.026 3.027 91.92% Castro::subcycle_advance_ctu() 10 2.952 2.956 2.972 90.25% Castro::do_advance_ctu() 10 2.951 2.956 2.971 90.24% Castro::construct_ctu_hydro_source() 10 2.22 2.223 2.227 67.62% Gravity::make_radial_gravity() 21 0.3059 0.3096 0.3224 9.79% AmrLevel::FillPatch() 41 0.1854 0.2078 0.2298 6.98% Amr::init() 1 0.1742 0.218 0.2263 6.87% Amr::initialInit() 1 0.1595 0.2037 0.2121 6.44% FillPatchIterator::Initialize 41 0.1547 0.1764 0.2056 6.25% Gravity::get_new_grav_vector() 11 0.2027 0.2042 0.2054 6.24% Castro::construct_old_gravity() 10 0.1823 0.1854 0.1962 5.96% Gravity::get_old_grav_vector() 10 0.1816 0.1847 0.1956 5.94% Castro::construct_new_gravity() 10 0.182 0.1824 0.183 5.56% Amr::InitializeInit() 1 0.06096 0.1347 0.1826 5.55% Amr::defBaseLevel() 1 0.06096 0.1347 0.1826 5.55% FillPatchIterator::FillFromLevel0() 41 0.1092 0.1325 0.1699 5.16% FillPatchSingleLevel 41 0.1091 0.1324 0.1698 5.16% Castro::initialize_do_advance() 10 0.1535 0.1573 0.1621 4.92% FabArray::ParallelCopy() 41 0.07834 0.1016 0.1425 4.33% check_for_negative_density() 10 0.04079 0.0897 0.1336 4.06% Castro::expand_state() 10 0.1029 0.1079 0.1177 3.57% Castro::do_old_sources() 10 0.09455 0.11 0.1152 3.50% Castro::initData() 1 0.03662 0.07318 0.1119 3.40% Castro::estTimeStep() 21 0.02753 0.0737 0.1093 3.32% Amr::FinalizeInit() 1 0.02568 0.06897 0.1085 3.30% FabArray::ParallelCopy_finish() 41 0.03775 0.06272 0.1079 3.28% Castro::clean_state() 62 0.1016 0.104 0.1066 3.24% amrex::Copy() 193 0.0632 0.07852 0.09039 2.75% Castro::computeInitialDt() 2 0.002608 0.04585 0.08528 2.59% FabArray::setVal() 143 0.05514 0.06648 0.07489 2.27% Castro::initialize_advance() 10 0.05057 0.06692 0.07127 2.16% Castro::computeTemp() 63 0.06175 0.06383 0.06518 1.98% Castro::do_new_sources() 10 0.0585 0.06115 0.06482 1.97% Amr::InitAmr() 1 0.0001888 0.006866 0.05314 1.61% DistributionMapping::SFCProcessorMapDoIt() 1 4.041e-05 0.04387 0.0522 1.59% DistributionMapping::LeastUsedCPUs() 1 3.533e-05 0.04386 0.05219 1.59% Castro::reset_internal_energy(MultiFab) 63 0.04422 0.04577 0.04673 1.42% Castro::reset_internal_energy(Fab) 1008 0.04396 0.0455 0.04645 1.41% FabArray::ParallelCopy_nowait() 41 0.0345 0.03883 0.0405 1.23% Castro::normalize_species() 62 0.03383 0.03488 0.0362 1.10% StateDataPhysBCFunct::() 41 0.02722 0.0307 0.03239 0.98% StateData::FillBoundary(geom) 41 0.02711 0.03058 0.03226 0.98% Castro::construct_new_source() 50 0.02831 0.02972 0.03152 0.96% Gravity::interpolate_monopole_grav() 21 0.02545 0.02603 0.02672 0.81% Castro::construct_new_gravity_source() 10 0.02252 0.02366 0.02515 0.76% Castro::post_init() 1 0.02289 0.02317 0.02326 0.71% Amr::writePlotFile() 2 0.02191 0.02203 0.02241 0.68% Castro::finalize_do_advance() 10 0.01614 0.01966 0.02236 0.68% Castro::construct_old_source() 50 0.006917 0.01147 0.01875 0.57% Castro::construct_old_gravity_source() 10 0.006865 0.01139 0.01866 0.57% Castro::apply_source_to_state() 20 0.01075 0.01332 0.01672 0.51% FabArray::Saxpy() 20 0.01071 0.01326 0.01666 0.51% Castro::post_timestep() 10 0.01387 0.01406 0.01431 0.43% Castro::Castro() 1 0.009349 0.01089 0.01395 0.42% VisMF::Write(FabArray) 2 0.009113 0.009803 0.01305 0.40% FabArray::setDomainBndry() 41 0.00773 0.01044 0.01288 0.39% Castro::check_for_nan() 20 0.00928 0.01051 0.01192 0.36% MultiFab::contains_nan() 20 0.009254 0.01048 0.0119 0.36% Castro::initMFs() 1 0.006376 0.007556 0.01044 0.32% Castro::computeNewDt() 9 0.009465 0.009473 0.009489 0.29% AmrLevel::AmrLevel(dm) 1 0.005359 0.006685 0.008133 0.25% Other 261 0.01899 0.02351 0.02669 0.81% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8503 KiB 8512 KiB 8520 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6624 KiB 6630 KiB 6632 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7004 KiB 7013 KiB 7016 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4471 KiB 4477 KiB 4495 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 212 KiB 234 KiB 259 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2747 KiB 2752 KiB 2753 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 236 KiB 239 KiB 249 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 45 KiB 65 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 1990 KiB 1993 KiB 1994 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 78 KiB 79 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 70 KiB 71 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-10-gd9a7e5ddffe5) finalized