Initializing AMReX (26.01-10-gd9a7e5ddffe5)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-10-gd9a7e5ddffe5) initialized Starting run at 06:34:29 UTC on 2026-01-12. Successfully read inputs file ... Castro git describe: 26.01-9-g966eca662 AMReX git describe: 26.01-10-gd9a7e5ddf Microphysics git describe: 26.01-9-gefa65791 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014592025 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.323371941 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.318063884 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.299513731 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.301676755 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.353413057 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.300786558 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.283859863 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.283426509 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.28334161 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.282069204 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007564071 seconds Ending run at 06:34:32 UTC on 2026-01-12. Run time = 3.205808953 Run time without initialization = 3.041973184 Average number of zones advanced per microsecond: 0.862 Average number of zones advanced per microsecond per rank: 0.108 TinyProfiler total time across processes [min...avg...max]: 3.2054 ... 3.2056 ... 3.2058 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0953 2.1206 2.1682 67.63% Gravity::make_radial_gravity() 21 0.2811 0.2881 0.3025 9.44% Castro::estTimeStep() 21 0.0258 0.06521 0.1046 3.26% Castro::initData() 1 0.03336 0.06784 0.1024 3.19% check_for_negative_density() 10 0.02328 0.07465 0.1017 3.17% amrex::Copy() 193 0.06522 0.07815 0.08614 2.69% FabArray::ParallelCopy_finish() 41 0.04247 0.05168 0.08107 2.53% FabArray::setVal() 143 0.0649 0.06985 0.07867 2.45% Castro::reset_internal_energy(Fab) 1008 0.04453 0.04571 0.04812 1.50% FabArray::ParallelCopy_nowait() 41 0.03475 0.03977 0.04178 1.30% Castro::normalize_species() 62 0.0354 0.03565 0.03581 1.12% FillPatchIterator::Initialize 41 0.02785 0.03211 0.03463 1.08% StateData::FillBoundary(geom) 41 0.02725 0.0305 0.03356 1.05% Castro::construct_new_gravity_source() 10 0.02314 0.0244 0.02689 0.84% Gravity::interpolate_monopole_grav() 21 0.02567 0.0259 0.0262 0.82% Castro::computeTemp() 63 0.01786 0.01807 0.01866 0.58% Castro::initialize_do_advance() 10 0.0127 0.01688 0.01843 0.58% Castro::initialize_advance() 10 0.005323 0.01088 0.01425 0.44% FabArray::Saxpy() 20 0.01073 0.01262 0.01376 0.43% FabArray::setDomainBndry() 41 0.007841 0.01059 0.01327 0.41% Amr::writePlotFile() 2 0.007214 0.01017 0.01283 0.40% VisMF::Write(FabArray) 2 0.008466 0.00972 0.01221 0.38% MultiFab::contains_nan() 20 0.009407 0.0104 0.01133 0.35% Castro::construct_old_gravity_source() 10 0.007073 0.009504 0.01016 0.32% Castro::enforce_min_density() 62 0.005847 0.006268 0.006764 0.21% Castro::construct_new_source() 50 0.005699 0.006069 0.006328 0.20% main() 1 0.003777 0.004128 0.004355 0.14% Gravity::get_new_grav_vector() 11 0.002985 0.003463 0.003816 0.12% Amr::coarseTimeStep() 10 0.0008048 0.002013 0.002725 0.08% Gravity::get_old_grav_vector() 10 0.001659 0.00201 0.002529 0.08% Castro::finalize_do_advance() 10 0.0006211 0.001198 0.001587 0.05% AmrLevel::FillPatch() 41 0.0008606 0.001168 0.001304 0.04% Amr::timeStep() 10 0.0001429 0.0001881 0.0004096 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002582 0.000279 0.0003133 0.01% Castro::do_advance_ctu() 10 0.0001454 0.0001761 0.0002354 0.01% Castro::clean_state() 62 0.0001313 0.0001589 0.000179 0.01% Castro::Castro() 1 9.262e-05 0.0001184 0.0001561 0.00% FillPatchIterator::FillFromLevel0() 41 9.08e-05 0.0001052 0.0001215 0.00% StateDataPhysBCFunct::() 41 9.654e-05 0.0001058 0.0001155 0.00% FabArray::ParallelCopy() 41 7.764e-05 9.179e-05 0.0001142 0.00% Castro::do_old_sources() 10 8.036e-05 9.123e-05 9.877e-05 0.00% FillPatchSingleLevel 41 7.127e-05 7.818e-05 9.148e-05 0.00% Castro::construct_old_source() 50 5.804e-05 6.899e-05 7.799e-05 0.00% Castro::do_new_sources() 10 5.374e-05 6.166e-05 7.532e-05 0.00% Amr::FinalizeInit() 1 3.628e-06 1.279e-05 7.246e-05 0.00% Castro::subcycle_advance_ctu() 10 4.593e-05 5.644e-05 7.209e-05 0.00% Castro::apply_source_to_state() 20 4.484e-05 5.75e-05 7.124e-05 0.00% Castro::advance() 10 3.302e-05 4.191e-05 5.628e-05 0.00% Amr::defBaseLevel() 1 3.498e-05 4.108e-05 5.199e-05 0.00% Castro::construct_old_gravity() 10 3.479e-05 4.165e-05 4.96e-05 0.00% Castro::construct_new_gravity() 10 3.012e-05 3.497e-05 4.221e-05 0.00% Castro::check_for_nan() 20 1.904e-05 2.525e-05 3.616e-05 0.00% Castro::post_init() 1 1.425e-05 2.059e-05 3.477e-05 0.00% Castro::expand_state() 10 2.04e-05 2.316e-05 2.948e-05 0.00% Castro::post_timestep() 10 1.597e-05 1.726e-05 1.946e-05 0.00% Amr::init() 1 1.908e-06 3.409e-06 1.202e-05 0.00% Castro::computeNewDt() 9 8.857e-06 9.507e-06 1.002e-05 0.00% Castro::computeInitialDt() 2 5.427e-06 6.806e-06 7.945e-06 0.00% Amr::InitializeInit() 1 5.13e-06 5.931e-06 7.37e-06 0.00% Amr::initialInit() 1 1.49e-06 1.828e-06 2.237e-06 0.00% Other 204 0.01657 0.01831 0.01966 0.61% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.205 3.206 3.206 100.00% Amr::coarseTimeStep() 10 3.03 3.03 3.03 94.52% Amr::timeStep() 10 3.017 3.018 3.019 94.17% Castro::advance() 10 3.003 3.003 3.004 93.70% Castro::subcycle_advance_ctu() 10 2.924 2.931 2.94 91.69% Castro::do_advance_ctu() 10 2.924 2.931 2.939 91.69% Castro::construct_ctu_hydro_source() 10 2.21 2.215 2.218 69.19% Gravity::make_radial_gravity() 21 0.2975 0.3042 0.3155 9.84% AmrLevel::FillPatch() 41 0.1777 0.1971 0.2097 6.54% Gravity::get_new_grav_vector() 11 0.2004 0.2031 0.2047 6.38% Castro::construct_old_gravity() 10 0.1756 0.1807 0.1909 5.96% Gravity::get_old_grav_vector() 10 0.1749 0.18 0.1902 5.93% Castro::construct_new_gravity() 10 0.1795 0.1812 0.1823 5.69% FillPatchIterator::Initialize 41 0.1469 0.1651 0.1819 5.67% Castro::initialize_do_advance() 10 0.1529 0.1628 0.168 5.24% Amr::init() 1 0.1633 0.1634 0.1636 5.10% Amr::initialInit() 1 0.1482 0.1486 0.1488 4.64% FillPatchIterator::FillFromLevel0() 41 0.1092 0.1224 0.1462 4.56% FillPatchSingleLevel 41 0.1091 0.1223 0.1461 4.56% Amr::InitializeInit() 1 0.05353 0.08857 0.1229 3.83% Amr::defBaseLevel() 1 0.05353 0.08856 0.1229 3.83% Castro::expand_state() 10 0.1006 0.112 0.1175 3.67% FabArray::ParallelCopy() 41 0.08107 0.09165 0.1161 3.62% Castro::clean_state() 62 0.1041 0.1053 0.1084 3.38% Castro::initData() 1 0.03732 0.07164 0.1061 3.31% Castro::estTimeStep() 21 0.0258 0.06521 0.1046 3.26% check_for_negative_density() 10 0.02328 0.07465 0.1017 3.17% Castro::do_old_sources() 10 0.08702 0.09156 0.09624 3.00% Amr::FinalizeInit() 1 0.0258 0.05999 0.09523 2.97% amrex::Copy() 193 0.06522 0.07815 0.08614 2.69% FabArray::ParallelCopy_finish() 41 0.04247 0.05168 0.08107 2.53% FabArray::setVal() 143 0.0649 0.06985 0.07867 2.45% Castro::initialize_advance() 10 0.05953 0.0685 0.07639 2.38% Castro::computeInitialDt() 2 0.002263 0.03647 0.07162 2.23% Castro::do_new_sources() 10 0.05951 0.0634 0.06976 2.18% Castro::computeTemp() 63 0.06274 0.06406 0.06706 2.09% Castro::reset_internal_energy(MultiFab) 63 0.04479 0.04599 0.0484 1.51% Castro::reset_internal_energy(Fab) 1008 0.04453 0.04571 0.04812 1.50% FabArray::ParallelCopy_nowait() 41 0.03487 0.03987 0.04187 1.31% Castro::normalize_species() 62 0.0354 0.03565 0.03581 1.12% StateDataPhysBCFunct::() 41 0.02736 0.03061 0.03367 1.05% StateData::FillBoundary(geom) 41 0.02725 0.0305 0.03356 1.05% Castro::construct_new_source() 50 0.02906 0.03047 0.03322 1.04% Castro::construct_new_gravity_source() 10 0.02314 0.0244 0.02689 0.84% Gravity::interpolate_monopole_grav() 21 0.02567 0.0259 0.0262 0.82% Castro::finalize_do_advance() 10 0.01508 0.02061 0.02489 0.78% Castro::post_init() 1 0.02297 0.02324 0.02338 0.73% Amr::writePlotFile() 2 0.0224 0.02254 0.02302 0.72% Castro::post_timestep() 10 0.0139 0.01434 0.0147 0.46% Castro::apply_source_to_state() 20 0.01079 0.01268 0.01381 0.43% FabArray::Saxpy() 20 0.01073 0.01262 0.01376 0.43% FabArray::setDomainBndry() 41 0.007841 0.01059 0.01327 0.41% VisMF::Write(FabArray) 2 0.008466 0.00972 0.01221 0.38% Castro::Castro() 1 0.01056 0.01117 0.01141 0.36% Castro::check_for_nan() 20 0.009431 0.01042 0.01137 0.35% MultiFab::contains_nan() 20 0.009407 0.0104 0.01133 0.35% Castro::construct_old_source() 50 0.007143 0.009573 0.01024 0.32% Castro::construct_old_gravity_source() 10 0.007073 0.009504 0.01016 0.32% Castro::computeNewDt() 9 0.009324 0.009337 0.009358 0.29% Castro::enforce_min_density() 62 0.005847 0.006268 0.006764 0.21% Other 204 0.02627 0.02883 0.03116 0.97% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8643 KiB 8653 KiB 8656 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6750 KiB 6757 KiB 6762 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7119 KiB 7126 KiB 7128 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4546 KiB 4558 KiB 4573 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 208 KiB 232 KiB 246 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2801 KiB 2804 KiB 2805 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 236 KiB 241 KiB 250 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 39 KiB 44 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 72 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-10-gd9a7e5ddffe5) finalized