Initializing AMReX (26.01-14-g443bf9e380c3)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-14-g443bf9e380c3) initialized Starting run at 01:17:33 UTC on 2026-01-15. Successfully read inputs file ... Castro git describe: 26.01-9-g966eca662 AMReX git describe: 26.01-14-g443bf9e38 Microphysics git describe: 26.01-10-ga50eada7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014626906 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.337574909 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.328682374 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.304441869 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.305188744 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.350865923 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.294995316 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.283818036 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.284242209 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.284681268 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.284860871 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007644876 seconds Ending run at 01:17:36 UTC on 2026-01-15. Run time = 3.249027866 Run time without initialization = 3.072408296 Average number of zones advanced per microsecond: 0.853 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2472 ... 3.2479 ... 3.2491 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0683 2.1340 2.1823 67.17% Gravity::make_radial_gravity() 21 0.281 0.2876 0.3047 9.38% check_for_negative_density() 10 0.03703 0.09035 0.1586 4.88% Castro::initData() 1 0.03929 0.07199 0.1123 3.46% Castro::estTimeStep() 21 0.02618 0.07341 0.1099 3.38% amrex::Copy() 193 0.06631 0.08153 0.09108 2.80% FabArray::ParallelCopy_finish() 41 0.03574 0.04863 0.08915 2.74% FabArray::setVal() 143 0.05512 0.06646 0.07233 2.23% Castro::reset_internal_energy(Fab) 1008 0.04272 0.04506 0.04895 1.51% FabArray::ParallelCopy_nowait() 41 0.0355 0.04101 0.04337 1.33% Castro::normalize_species() 62 0.03551 0.03644 0.03785 1.16% FillPatchIterator::Initialize 41 0.02794 0.03351 0.03545 1.09% StateData::FillBoundary(geom) 41 0.02656 0.03104 0.03409 1.05% Gravity::interpolate_monopole_grav() 21 0.02551 0.02598 0.02662 0.82% Castro::construct_new_gravity_source() 10 0.02235 0.02417 0.0262 0.81% Castro::computeTemp() 63 0.01722 0.01802 0.01883 0.58% Castro::initialize_do_advance() 10 0.01131 0.01672 0.01791 0.55% FabArray::setDomainBndry() 41 0.007659 0.0114 0.01345 0.41% FabArray::Saxpy() 20 0.01067 0.01248 0.01344 0.41% Castro::initialize_advance() 10 0.005305 0.01058 0.01338 0.41% VisMF::Write(FabArray) 2 0.009278 0.009828 0.01275 0.39% MultiFab::contains_nan() 20 0.009604 0.01046 0.01166 0.36% Amr::writePlotFile() 2 0.007346 0.009592 0.01013 0.31% Castro::construct_old_gravity_source() 10 0.006926 0.009476 0.01003 0.31% Castro::initMFs() 1 0.006613 0.007196 0.007882 0.24% Castro::construct_new_source() 50 0.005586 0.00598 0.006235 0.19% main() 1 0.003944 0.004275 0.004881 0.15% Gravity::get_new_grav_vector() 11 0.003217 0.003669 0.003906 0.12% Gravity::get_old_grav_vector() 10 0.001502 0.002133 0.002637 0.08% Amr::coarseTimeStep() 10 0.0008564 0.001727 0.002527 0.08% AmrLevel::FillPatch() 41 0.0007337 0.001122 0.001321 0.04% Castro::finalize_do_advance() 10 0.0005464 0.001135 0.001265 0.04% Amr::timeStep() 10 0.0001263 0.0001775 0.0004024 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000262 0.000278 0.0003027 0.01% Castro::do_advance_ctu() 10 0.0001486 0.0001728 0.0002057 0.01% Castro::clean_state() 62 0.0001323 0.0001441 0.0001625 0.01% FillPatchIterator::FillFromLevel0() 41 8.799e-05 0.0001017 0.0001223 0.00% StateDataPhysBCFunct::() 41 8.479e-05 0.0001053 0.000114 0.00% Castro::Castro() 1 6.812e-05 8.575e-05 0.000114 0.00% FabArray::ParallelCopy() 41 8.417e-05 9.34e-05 0.0001037 0.00% Castro::do_old_sources() 10 7.315e-05 8.715e-05 9.63e-05 0.00% FillPatchSingleLevel 41 7.009e-05 7.804e-05 8.593e-05 0.00% Castro::construct_old_source() 50 5.122e-05 6.623e-05 8.535e-05 0.00% Amr::FinalizeInit() 1 3.387e-06 1.314e-05 7.541e-05 0.00% Castro::do_new_sources() 10 4.991e-05 5.649e-05 6.372e-05 0.00% Castro::apply_source_to_state() 20 4.27e-05 5.066e-05 5.957e-05 0.00% Castro::subcycle_advance_ctu() 10 4.288e-05 4.958e-05 5.774e-05 0.00% Castro::construct_old_gravity() 10 3.351e-05 4.198e-05 5.244e-05 0.00% Castro::construct_new_gravity() 10 2.998e-05 3.652e-05 4.693e-05 0.00% Amr::defBaseLevel() 1 3.591e-05 3.816e-05 4.3e-05 0.00% Castro::advance() 10 3.472e-05 3.806e-05 4.045e-05 0.00% Castro::expand_state() 10 2.237e-05 2.653e-05 3.019e-05 0.00% Castro::check_for_nan() 20 2.019e-05 2.278e-05 2.726e-05 0.00% Castro::post_init() 1 1.499e-05 1.751e-05 2.448e-05 0.00% Castro::post_timestep() 10 1.525e-05 1.683e-05 2.005e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.49e-06 9.46e-06 1.059e-05 0.00% Castro::computeNewDt() 9 7.998e-06 9.126e-06 1.017e-05 0.00% Castro::computeInitialDt() 2 5.84e-06 6.826e-06 8.56e-06 0.00% Amr::InitializeInit() 1 5.392e-06 6.065e-06 6.526e-06 0.00% Amr::initialInit() 1 1.301e-06 2.097e-06 3.29e-06 0.00% Amr::init() 1 1.65e-06 2.165e-06 2.838e-06 0.00% Other 264 0.01516 0.01906 0.02143 0.66% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.247 3.248 3.249 100.00% Amr::coarseTimeStep() 10 3.06 3.06 3.06 94.18% Amr::timeStep() 10 3.045 3.046 3.047 93.78% Castro::advance() 10 3.031 3.032 3.032 93.32% Castro::subcycle_advance_ctu() 10 2.957 2.961 2.976 91.59% Castro::do_advance_ctu() 10 2.957 2.961 2.976 91.59% Castro::construct_ctu_hydro_source() 10 2.239 2.244 2.247 69.15% Gravity::make_radial_gravity() 21 0.2988 0.3048 0.3197 9.84% AmrLevel::FillPatch() 41 0.1834 0.1997 0.2116 6.51% Gravity::get_new_grav_vector() 11 0.2026 0.204 0.205 6.31% Castro::construct_old_gravity() 10 0.1767 0.1824 0.1962 6.04% Gravity::get_old_grav_vector() 10 0.176 0.1817 0.1955 6.02% FillPatchIterator::Initialize 41 0.1527 0.1661 0.1873 5.76% Castro::construct_new_gravity() 10 0.1804 0.1812 0.1819 5.60% Amr::init() 1 0.175 0.1757 0.1763 5.43% Castro::initialize_do_advance() 10 0.1546 0.1622 0.1664 5.12% Amr::initialInit() 1 0.1602 0.1613 0.1619 4.98% check_for_negative_density() 10 0.03703 0.09035 0.1586 4.88% FillPatchIterator::FillFromLevel0() 41 0.1076 0.1211 0.1517 4.67% FillPatchSingleLevel 41 0.1075 0.121 0.1516 4.67% Amr::InitializeInit() 1 0.06085 0.09335 0.1341 4.13% Amr::defBaseLevel() 1 0.06084 0.09334 0.1341 4.13% FabArray::ParallelCopy() 41 0.07648 0.08982 0.1249 3.84% Castro::expand_state() 10 0.1021 0.1117 0.1187 3.65% Castro::initData() 1 0.04268 0.07555 0.1155 3.56% Castro::clean_state() 62 0.1013 0.1052 0.1104 3.40% Castro::estTimeStep() 21 0.02618 0.07341 0.1099 3.38% Amr::FinalizeInit() 1 0.02673 0.06791 0.09933 3.06% Castro::do_old_sources() 10 0.09127 0.09361 0.09564 2.94% amrex::Copy() 193 0.06631 0.08153 0.09108 2.80% FabArray::ParallelCopy_finish() 41 0.03574 0.04863 0.08915 2.74% Castro::computeInitialDt() 2 0.002408 0.04362 0.07535 2.32% FabArray::setVal() 143 0.05512 0.06646 0.07233 2.23% Castro::initialize_advance() 10 0.05201 0.06697 0.07159 2.20% Castro::do_new_sources() 10 0.05748 0.06209 0.06875 2.12% Castro::computeTemp() 63 0.06028 0.06337 0.06807 2.10% Castro::reset_internal_energy(MultiFab) 63 0.04298 0.04534 0.04924 1.52% Castro::reset_internal_energy(Fab) 1008 0.04272 0.04506 0.04895 1.51% FabArray::ParallelCopy_nowait() 41 0.03561 0.0411 0.04346 1.34% Castro::normalize_species() 62 0.03551 0.03644 0.03785 1.16% StateDataPhysBCFunct::() 41 0.02664 0.03114 0.03419 1.05% StateData::FillBoundary(geom) 41 0.02656 0.03104 0.03409 1.05% Castro::construct_new_source() 50 0.02794 0.03015 0.03244 1.00% Gravity::interpolate_monopole_grav() 21 0.02551 0.02598 0.02662 0.82% Castro::construct_new_gravity_source() 10 0.02235 0.02417 0.0262 0.81% Castro::post_init() 1 0.0236 0.02405 0.02422 0.75% Castro::finalize_do_advance() 10 0.01315 0.02002 0.02413 0.74% Amr::writePlotFile() 2 0.02205 0.02219 0.02251 0.69% Castro::post_timestep() 10 0.01362 0.01419 0.01473 0.45% Castro::apply_source_to_state() 20 0.01071 0.01253 0.0135 0.42% FabArray::setDomainBndry() 41 0.007659 0.0114 0.01345 0.41% FabArray::Saxpy() 20 0.01067 0.01248 0.01344 0.41% VisMF::Write(FabArray) 2 0.009278 0.009828 0.01275 0.39% Castro::Castro() 1 0.01001 0.01105 0.01187 0.37% Castro::check_for_nan() 20 0.009625 0.01049 0.01168 0.36% MultiFab::contains_nan() 20 0.009604 0.01046 0.01166 0.36% Castro::computeNewDt() 9 0.01091 0.01093 0.01094 0.34% Castro::construct_old_source() 50 0.006977 0.009542 0.0101 0.31% Castro::construct_old_gravity_source() 10 0.006926 0.009476 0.01003 0.31% Castro::initMFs() 1 0.006613 0.007196 0.007882 0.24% AmrLevel::AmrLevel(dm) 1 0.005455 0.005903 0.006367 0.20% Other 264 0.01957 0.02457 0.02787 0.86% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 2 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8637 KiB 8648 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6729 KiB 6733 KiB 6734 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7115 KiB 7123 KiB 7125 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4538 KiB 4544 KiB 4562 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 211 KiB 231 KiB 246 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 17 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2789 KiB 2793 KiB 2794 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 233 KiB 238 KiB 249 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 42 KiB 60 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 79 KiB 80 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 71 KiB 77 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-14-g443bf9e380c3) finalized