Initializing AMReX (26.01-14-g443bf9e380c3)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-14-g443bf9e380c3) initialized Starting run at 06:32:41 UTC on 2026-01-14. Successfully read inputs file ... Castro git describe: 26.01-9-g966eca662 AMReX git describe: 26.01-14-g443bf9e38 Microphysics git describe: 26.01-11-g4fdcf27c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01513233 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.333897703 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.322590609 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.305384512 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.308586287 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.355578034 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.293248165 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.286077871 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.285317751 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.285832874 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.285887236 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00775134 seconds Ending run at 06:32:44 UTC on 2026-01-14. Run time = 3.276394061 Run time without initialization = 3.075490779 Average number of zones advanced per microsecond: 0.852 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2721 ... 3.2750 ... 3.2764 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0596 2.1182 2.1709 66.26% Gravity::make_radial_gravity() 21 0.2877 0.2993 0.3177 9.70% check_for_negative_density() 10 0.03323 0.1 0.168 5.13% Castro::estTimeStep() 21 0.03099 0.08789 0.1304 3.98% Castro::initData() 1 0.03456 0.0733 0.127 3.88% amrex::Copy() 193 0.06252 0.08165 0.1029 3.14% FabArray::ParallelCopy_finish() 41 0.04267 0.05468 0.09572 2.92% FabArray::setVal() 143 0.05346 0.06467 0.06967 2.13% Castro::reset_internal_energy(Fab) 1008 0.04005 0.04505 0.04722 1.44% FabArray::ParallelCopy_nowait() 41 0.03486 0.03976 0.04178 1.28% Castro::normalize_species() 62 0.03504 0.03574 0.03651 1.11% FillPatchIterator::Initialize 41 0.02768 0.03322 0.03537 1.08% StateData::FillBoundary(geom) 41 0.02812 0.03108 0.03534 1.08% Gravity::interpolate_monopole_grav() 21 0.02522 0.02585 0.02636 0.80% Castro::construct_new_gravity_source() 10 0.02244 0.02393 0.02601 0.79% Castro::computeTemp() 63 0.01618 0.01794 0.01849 0.56% Castro::initialize_do_advance() 10 0.0115 0.01662 0.01798 0.55% FabArray::Saxpy() 20 0.01038 0.01246 0.01344 0.41% Castro::initialize_advance() 10 0.005274 0.01058 0.01342 0.41% FabArray::setDomainBndry() 41 0.00778 0.01142 0.01326 0.40% VisMF::Write(FabArray) 2 0.008691 0.009768 0.01267 0.39% Amr::writePlotFile() 2 0.007578 0.0108 0.01264 0.39% MultiFab::contains_nan() 20 0.00982 0.01051 0.01182 0.36% Castro::initMFs() 1 0.006421 0.007793 0.01046 0.32% Castro::construct_old_gravity_source() 10 0.00666 0.009303 0.009851 0.30% StateData::define() 4 0.005218 0.006349 0.008588 0.26% Castro::construct_new_source() 50 0.005438 0.00599 0.006382 0.19% main() 1 0.003861 0.00427 0.004611 0.14% Gravity::get_new_grav_vector() 11 0.002599 0.003561 0.003959 0.12% Amr::coarseTimeStep() 10 0.0009351 0.001498 0.002951 0.09% Gravity::get_old_grav_vector() 10 0.001542 0.002162 0.002845 0.09% AmrLevel::FillPatch() 41 0.0009861 0.001276 0.001437 0.04% Castro::finalize_do_advance() 10 0.0006149 0.001077 0.001261 0.04% Amr::timeStep() 10 0.0001386 0.0001917 0.0004451 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002483 0.0002791 0.0003027 0.01% Castro::do_advance_ctu() 10 0.0001513 0.0001792 0.0002145 0.01% Castro::clean_state() 62 0.0001319 0.0001482 0.0001684 0.01% StateDataPhysBCFunct::() 41 9.977e-05 0.0001127 0.0001433 0.00% FillPatchIterator::FillFromLevel0() 41 9.022e-05 0.0001047 0.0001238 0.00% FabArray::ParallelCopy() 41 8.755e-05 9.545e-05 0.0001032 0.00% Castro::do_old_sources() 10 7.034e-05 8.607e-05 9.991e-05 0.00% FillPatchSingleLevel 41 7.352e-05 7.74e-05 8.773e-05 0.00% Castro::Castro() 1 5.632e-05 7.038e-05 8.707e-05 0.00% Castro::construct_old_source() 50 4.942e-05 6.806e-05 8.169e-05 0.00% Amr::FinalizeInit() 1 3.904e-06 1.341e-05 7.41e-05 0.00% Castro::do_new_sources() 10 4.84e-05 5.743e-05 6.987e-05 0.00% Castro::apply_source_to_state() 20 4.254e-05 5.132e-05 6.421e-05 0.00% Castro::subcycle_advance_ctu() 10 4.455e-05 5.029e-05 6.046e-05 0.00% Amr::defBaseLevel() 1 3.538e-05 4.548e-05 5.815e-05 0.00% Castro::construct_old_gravity() 10 3.367e-05 4.083e-05 5.162e-05 0.00% Castro::advance() 10 3.836e-05 4.156e-05 4.549e-05 0.00% Castro::construct_new_gravity() 10 3.001e-05 3.522e-05 4.096e-05 0.00% Castro::expand_state() 10 2.222e-05 2.637e-05 3.04e-05 0.00% Castro::check_for_nan() 20 2.126e-05 2.353e-05 2.813e-05 0.00% Castro::post_timestep() 10 1.502e-05 1.774e-05 1.958e-05 0.00% Castro::post_init() 1 1.417e-05 1.627e-05 1.823e-05 0.00% AmrLevel::AmrLevel(dm) 1 7.991e-06 1.048e-05 1.685e-05 0.00% Castro::computeNewDt() 9 8.39e-06 9.438e-06 1.015e-05 0.00% Castro::computeInitialDt() 2 5.995e-06 7.052e-06 8.712e-06 0.00% Amr::InitializeInit() 1 5.363e-06 6.552e-06 8.198e-06 0.00% Amr::init() 1 1.896e-06 2.212e-06 2.692e-06 0.00% Amr::initialInit() 1 1.386e-06 1.751e-06 2.127e-06 0.00% Other 260 0.01042 0.0153 0.01914 0.58% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.272 3.275 3.276 100.00% Amr::coarseTimeStep() 10 3.063 3.063 3.063 93.49% Amr::timeStep() 10 3.05 3.051 3.052 93.14% Castro::advance() 10 3.036 3.037 3.037 92.70% Castro::subcycle_advance_ctu() 10 2.963 2.967 2.983 91.03% Castro::do_advance_ctu() 10 2.963 2.967 2.983 91.03% Castro::construct_ctu_hydro_source() 10 2.224 2.238 2.246 68.55% Gravity::make_radial_gravity() 21 0.3031 0.3153 0.3305 10.09% AmrLevel::FillPatch() 41 0.1862 0.2057 0.22 6.72% Gravity::get_new_grav_vector() 11 0.208 0.2091 0.2101 6.41% Amr::init() 1 0.1966 0.1994 0.2008 6.13% Castro::construct_old_gravity() 10 0.1788 0.1879 0.2 6.10% Gravity::get_old_grav_vector() 10 0.178 0.1872 0.1993 6.08% FillPatchIterator::Initialize 41 0.1559 0.1707 0.1955 5.97% Amr::initialInit() 1 0.1811 0.1841 0.1854 5.66% Castro::construct_new_gravity() 10 0.1835 0.1845 0.1852 5.65% check_for_negative_density() 10 0.03323 0.1 0.168 5.13% Castro::initialize_do_advance() 10 0.1531 0.1622 0.1674 5.11% FillPatchIterator::FillFromLevel0() 41 0.1137 0.126 0.16 4.88% FillPatchSingleLevel 41 0.1136 0.1259 0.1599 4.88% Amr::InitializeInit() 1 0.05795 0.09719 0.1527 4.66% Amr::defBaseLevel() 1 0.05795 0.09719 0.1527 4.66% Castro::initData() 1 0.03803 0.07671 0.131 4.00% FabArray::ParallelCopy() 41 0.08337 0.09464 0.1308 3.99% Castro::estTimeStep() 21 0.03099 0.08789 0.1304 3.98% Amr::FinalizeInit() 1 0.029 0.08689 0.1274 3.89% Castro::expand_state() 10 0.1017 0.1116 0.1235 3.77% Castro::do_old_sources() 10 0.09038 0.09848 0.1094 3.34% Castro::clean_state() 62 0.09647 0.1044 0.1068 3.26% amrex::Copy() 193 0.06252 0.08165 0.1029 3.14% Castro::computeInitialDt() 2 0.002683 0.06096 0.1017 3.10% FabArray::ParallelCopy_finish() 41 0.04267 0.05468 0.09572 2.92% Castro::initialize_advance() 10 0.05044 0.06618 0.07054 2.15% FabArray::setVal() 143 0.05346 0.06467 0.06967 2.13% Castro::do_new_sources() 10 0.056 0.06121 0.06679 2.04% Castro::computeTemp() 63 0.0565 0.06327 0.06599 2.01% Castro::reset_internal_energy(MultiFab) 63 0.04032 0.04533 0.0475 1.45% Castro::reset_internal_energy(Fab) 1008 0.04005 0.04505 0.04722 1.44% FabArray::ParallelCopy_nowait() 41 0.03497 0.03986 0.04186 1.28% Castro::normalize_species() 62 0.03504 0.03574 0.03651 1.11% StateDataPhysBCFunct::() 41 0.02826 0.0312 0.03545 1.08% StateData::FillBoundary(geom) 41 0.02812 0.03108 0.03534 1.08% Castro::construct_new_source() 50 0.02806 0.02992 0.03219 0.98% Gravity::interpolate_monopole_grav() 21 0.02522 0.02585 0.02636 0.80% Castro::post_init() 1 0.02561 0.02578 0.02616 0.80% Castro::construct_new_gravity_source() 10 0.02244 0.02393 0.02601 0.79% Castro::finalize_do_advance() 10 0.01302 0.01882 0.02413 0.74% Amr::writePlotFile() 2 0.02278 0.02316 0.02337 0.71% Castro::post_timestep() 10 0.01315 0.01414 0.0147 0.45% Castro::Castro() 1 0.009796 0.01125 0.01427 0.44% Castro::apply_source_to_state() 20 0.01043 0.01251 0.0135 0.41% FabArray::Saxpy() 20 0.01038 0.01246 0.01344 0.41% FabArray::setDomainBndry() 41 0.00778 0.01142 0.01326 0.40% VisMF::Write(FabArray) 2 0.008691 0.009768 0.01267 0.39% Castro::check_for_nan() 20 0.009842 0.01054 0.01185 0.36% MultiFab::contains_nan() 20 0.00982 0.01051 0.01182 0.36% Castro::initMFs() 1 0.006421 0.007793 0.01046 0.32% Castro::construct_old_source() 50 0.006709 0.009371 0.009933 0.30% Castro::construct_old_gravity_source() 10 0.00666 0.009303 0.009851 0.30% Castro::computeNewDt() 9 0.009188 0.009201 0.009215 0.28% AmrLevel::AmrLevel(dm) 1 0.005226 0.00636 0.008605 0.26% StateData::define() 4 0.005218 0.006349 0.008588 0.26% Other 260 0.01481 0.02284 0.02864 0.87% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8631 KiB 8640 KiB 8647 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6677 KiB 6684 KiB 6689 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7110 KiB 7118 KiB 7121 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4510 KiB 4516 KiB 4541 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 211 KiB 234 KiB 253 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2771 KiB 2774 KiB 2775 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 235 KiB 244 KiB 257 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 39 KiB 43 KiB 62 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2020 KiB 2023 KiB 2024 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 81 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 73 KiB 78 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-14-g443bf9e380c3) finalized