Initializing AMReX (26.01-17-g909028cb95b3)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-17-g909028cb95b3) initialized Starting run at 02:01:28 UTC on 2026-01-16. Successfully read inputs file ... Castro git describe: 26.01-10-g409d8e9cc AMReX git describe: 26.01-17-g909028cb9 Microphysics git describe: 26.01-21-gbace8d29 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014582719 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.391608327 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.3775226 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.344756615 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.389586961 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.348165355 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.330827132 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.329587117 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.331430854 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.332211297 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.338810314 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007981182 seconds Ending run at 02:01:32 UTC on 2026-01-16. Run time = 3.723091378 Run time without initialization = 3.527851879 Average number of zones advanced per microsecond: 0.743 Average number of zones advanced per microsecond per rank: 0.093 TinyProfiler total time across processes [min...avg...max]: 3.7191 ... 3.7219 ... 3.7231 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.5695 2.5915 2.6334 70.73% Gravity::make_radial_gravity() 21 0.2617 0.2667 0.276 7.41% check_for_negative_density() 10 0.07006 0.115 0.1362 3.66% Castro::estTimeStep() 21 0.03373 0.08518 0.1308 3.51% Castro::initData() 1 0.03441 0.07497 0.1236 3.32% amrex::Copy() 193 0.06301 0.07656 0.08458 2.27% FabArray::ParallelCopy_finish() 41 0.03511 0.04942 0.08029 2.16% FabArray::setVal() 143 0.06077 0.06636 0.07343 1.97% Castro::reset_internal_energy(Fab) 1008 0.0441 0.0463 0.04779 1.28% FabArray::ParallelCopy_nowait() 41 0.03414 0.03899 0.0406 1.09% Castro::normalize_species() 62 0.03392 0.0342 0.03468 0.93% FillPatchIterator::Initialize 41 0.02797 0.03187 0.0343 0.92% StateData::FillBoundary(geom) 41 0.02891 0.03044 0.03223 0.87% Castro::construct_new_gravity_source() 10 0.02419 0.02584 0.02785 0.75% Gravity::interpolate_monopole_grav() 21 0.02529 0.02578 0.02605 0.70% Castro::computeTemp() 63 0.01692 0.01809 0.01854 0.50% Castro::initialize_do_advance() 10 0.01304 0.01628 0.01827 0.49% FabArray::Saxpy() 20 0.01013 0.01196 0.013 0.35% Castro::initialize_advance() 10 0.005579 0.01008 0.01279 0.34% Amr::writePlotFile() 2 0.007511 0.01047 0.01277 0.34% FabArray::setDomainBndry() 41 0.00796 0.0106 0.01242 0.33% VisMF::Write(FabArray) 2 0.008473 0.009654 0.01227 0.33% Castro::enforce_min_density() 62 0.01101 0.01122 0.01136 0.31% MultiFab::contains_nan() 20 0.009373 0.009965 0.01103 0.30% Castro::initMFs() 1 0.006485 0.007751 0.01087 0.29% Castro::construct_old_gravity_source() 10 0.006432 0.009023 0.009655 0.26% Castro::construct_new_source() 50 0.005328 0.005699 0.005957 0.16% main() 1 0.004013 0.004335 0.004623 0.12% Gravity::get_new_grav_vector() 11 0.003136 0.003597 0.003837 0.10% Amr::coarseTimeStep() 10 0.001576 0.002391 0.0027 0.07% Gravity::get_old_grav_vector() 10 0.001715 0.002017 0.002469 0.07% Castro::finalize_do_advance() 10 0.0005922 0.001215 0.001761 0.05% AmrLevel::FillPatch() 41 0.0007865 0.001123 0.001332 0.04% Amr::timeStep() 10 0.0001281 0.0001786 0.000441 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002585 0.0002775 0.0002973 0.01% Castro::do_advance_ctu() 10 0.0001461 0.000165 0.0001806 0.00% Castro::clean_state() 62 0.000127 0.0001404 0.0001507 0.00% StateDataPhysBCFunct::() 41 0.0001043 0.0001115 0.0001185 0.00% FillPatchIterator::FillFromLevel0() 41 9.118e-05 0.0001033 0.000115 0.00% FabArray::ParallelCopy() 41 8.792e-05 9.393e-05 0.0001034 0.00% Castro::Castro() 1 5.396e-05 7.753e-05 9.263e-05 0.00% Amr::FinalizeInit() 1 3.831e-06 1.524e-05 9.155e-05 0.00% Castro::do_old_sources() 10 6.688e-05 8.108e-05 9.043e-05 0.00% FillPatchSingleLevel 41 6.665e-05 7.631e-05 8.32e-05 0.00% Castro::construct_old_source() 50 4.522e-05 6.296e-05 7.08e-05 0.00% Castro::do_new_sources() 10 4.802e-05 5.364e-05 6.4e-05 0.00% Castro::apply_source_to_state() 20 4.224e-05 4.992e-05 6.358e-05 0.00% Castro::subcycle_advance_ctu() 10 4.147e-05 4.935e-05 5.883e-05 0.00% Amr::defBaseLevel() 1 3.396e-05 4.503e-05 5.841e-05 0.00% Castro::construct_old_gravity() 10 3.393e-05 3.901e-05 4.565e-05 0.00% Castro::advance() 10 3.674e-05 3.858e-05 4.2e-05 0.00% Castro::construct_new_gravity() 10 2.837e-05 3.428e-05 3.919e-05 0.00% Castro::check_for_nan() 20 1.951e-05 2.404e-05 2.899e-05 0.00% Castro::expand_state() 10 1.826e-05 2.302e-05 2.707e-05 0.00% Castro::post_timestep() 10 1.41e-05 1.651e-05 1.988e-05 0.00% AmrLevel::AmrLevel(dm) 1 8.516e-06 1.202e-05 1.933e-05 0.00% Castro::computeNewDt() 9 7.917e-06 9.086e-06 1.085e-05 0.00% Amr::InitializeInit() 1 5.772e-06 7.306e-06 9.797e-06 0.00% Castro::computeInitialDt() 2 6.027e-06 6.724e-06 7.631e-06 0.00% Castro::post_init() 1 2.39e-06 3.069e-06 3.776e-06 0.00% Amr::init() 1 1.56e-06 2.052e-06 2.573e-06 0.00% Amr::initialInit() 1 1.149e-06 1.826e-06 2.333e-06 0.00% Other 202 0.01013 0.01546 0.02025 0.54% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.719 3.722 3.723 100.00% Amr::coarseTimeStep() 10 3.515 3.515 3.515 94.42% Amr::timeStep() 10 3.502 3.502 3.503 94.08% Castro::advance() 10 3.487 3.487 3.488 93.68% Castro::subcycle_advance_ctu() 10 3.411 3.417 3.426 92.02% Castro::do_advance_ctu() 10 3.411 3.417 3.426 92.02% Castro::construct_ctu_hydro_source() 10 2.724 2.727 2.73 73.33% Gravity::make_radial_gravity() 21 0.2779 0.2826 0.2891 7.76% AmrLevel::FillPatch() 41 0.1791 0.1934 0.206 5.53% Gravity::get_new_grav_vector() 11 0.1927 0.1937 0.195 5.24% Amr::init() 1 0.1911 0.1939 0.1949 5.24% FillPatchIterator::Initialize 41 0.149 0.1618 0.1804 4.84% Amr::initialInit() 1 0.1762 0.1791 0.1803 4.84% Castro::construct_old_gravity() 10 0.1634 0.1678 0.1743 4.68% Gravity::get_old_grav_vector() 10 0.1628 0.1671 0.1735 4.66% Castro::construct_new_gravity() 10 0.1713 0.172 0.1728 4.64% Castro::initialize_do_advance() 10 0.1513 0.1604 0.1653 4.44% Amr::InitializeInit() 1 0.05808 0.09939 0.1508 4.05% Amr::defBaseLevel() 1 0.05807 0.09939 0.1508 4.05% FillPatchIterator::FillFromLevel0() 41 0.1055 0.1193 0.1444 3.88% FillPatchSingleLevel 41 0.1054 0.1192 0.1443 3.88% check_for_negative_density() 10 0.07006 0.115 0.1362 3.66% Castro::estTimeStep() 21 0.03373 0.08518 0.1308 3.51% Castro::initData() 1 0.0381 0.07868 0.1274 3.42% Amr::FinalizeInit() 1 0.02534 0.07972 0.1222 3.28% Castro::expand_state() 10 0.1009 0.1099 0.116 3.12% FabArray::ParallelCopy() 41 0.07483 0.0886 0.1146 3.08% Castro::clean_state() 62 0.1057 0.1093 0.111 2.98% Castro::computeInitialDt() 2 0.002347 0.05633 0.09866 2.65% Castro::do_old_sources() 10 0.08478 0.08916 0.09257 2.49% amrex::Copy() 193 0.06301 0.07656 0.08458 2.27% FabArray::ParallelCopy_finish() 41 0.03511 0.04942 0.08029 2.16% FabArray::setVal() 143 0.06077 0.06636 0.07343 1.97% Castro::initialize_advance() 10 0.05689 0.06642 0.0722 1.94% Castro::do_new_sources() 10 0.06169 0.0653 0.07015 1.88% Castro::computeTemp() 63 0.06131 0.06467 0.06655 1.79% Castro::reset_internal_energy(MultiFab) 63 0.04438 0.04658 0.04805 1.29% Castro::reset_internal_energy(Fab) 1008 0.0441 0.0463 0.04779 1.28% FabArray::ParallelCopy_nowait() 41 0.03423 0.03908 0.0407 1.09% Castro::normalize_species() 62 0.03392 0.0342 0.03468 0.93% Castro::construct_new_source() 50 0.02992 0.03153 0.03381 0.91% StateDataPhysBCFunct::() 41 0.02903 0.03055 0.03233 0.87% StateData::FillBoundary(geom) 41 0.02891 0.03044 0.03223 0.87% Castro::construct_new_gravity_source() 10 0.02419 0.02584 0.02785 0.75% Gravity::interpolate_monopole_grav() 21 0.02529 0.02578 0.02605 0.70% Castro::finalize_do_advance() 10 0.01539 0.02051 0.02422 0.65% Amr::writePlotFile() 2 0.02269 0.02284 0.02324 0.62% Castro::post_init() 1 0.02268 0.02304 0.02318 0.62% Castro::post_timestep() 10 0.01406 0.01491 0.01528 0.41% Castro::Castro() 1 0.009875 0.01154 0.01503 0.40% Castro::apply_source_to_state() 20 0.01018 0.01201 0.01306 0.35% FabArray::Saxpy() 20 0.01013 0.01196 0.013 0.35% FabArray::setDomainBndry() 41 0.00796 0.0106 0.01242 0.33% VisMF::Write(FabArray) 2 0.008473 0.009654 0.01227 0.33% Castro::enforce_min_density() 62 0.01101 0.01122 0.01136 0.31% Castro::check_for_nan() 20 0.009395 0.009989 0.01106 0.30% MultiFab::contains_nan() 20 0.009373 0.009965 0.01103 0.30% Castro::initMFs() 1 0.006485 0.007751 0.01087 0.29% Castro::computeNewDt() 9 0.009213 0.009578 0.009947 0.27% Castro::construct_old_source() 50 0.006477 0.009086 0.009725 0.26% Castro::construct_old_gravity_source() 10 0.006432 0.009023 0.009655 0.26% AmrLevel::AmrLevel(dm) 1 0.005326 0.006333 0.008556 0.23% Other 202 0.01484 0.02326 0.0294 0.79% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 15 MiB 15 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 2 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 15 MiB 15 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8627 KiB 8648 KiB 8654 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6742 KiB 6751 KiB 6755 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7110 KiB 7122 KiB 7125 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4570 KiB 4577 KiB 4591 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 180 KiB 196 KiB 210 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 13 KiB 15 KiB 18 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2800 KiB 2804 KiB 2805 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 189 KiB 193 KiB 197 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 31 KiB 37 KiB 48 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2020 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 66 KiB 66 KiB 67 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 56 KiB 57 KiB 59 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-17-g909028cb95b3) finalized