Initializing AMReX (26.01-15-g46479e6159ec)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-15-g46479e6159ec) initialized Starting run at 06:31:59 UTC on 2026-01-15. Successfully read inputs file ... Castro git describe: 26.01-9-g966eca662 AMReX git describe: 26.01-15-g46479e615 Microphysics git describe: 26.01-11-g4fdcf27c reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014620525 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.323870253 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.312665076 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.309993956 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.304591249 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.345633862 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.296203768 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.28624884 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.286821571 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.287694815 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.287354132 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007618387 seconds Ending run at 06:32:02 UTC on 2026-01-15. Run time = 3.265399712 Run time without initialization = 3.054078478 Average number of zones advanced per microsecond: 0.858 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2642 ... 3.2647 ... 3.2656 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0682 2.1357 2.1721 66.52% Gravity::make_radial_gravity() 21 0.2792 0.286 0.3038 9.30% check_for_negative_density() 10 0.04384 0.07754 0.1507 4.61% Castro::initData() 1 0.03574 0.07065 0.1023 3.13% Castro::estTimeStep() 21 0.02442 0.06074 0.09917 3.04% amrex::Copy() 193 0.06481 0.08159 0.08874 2.72% FabArray::ParallelCopy_finish() 41 0.03505 0.04763 0.08183 2.51% FabArray::setVal() 143 0.05623 0.06611 0.0709 2.17% Castro::reset_internal_energy(Fab) 1008 0.04441 0.04587 0.04749 1.45% DistributionMapping::LeastUsedCPUs() 1 4.378e-05 0.03985 0.04604 1.41% Amr::InitAmr() 1 0.0001788 0.005841 0.04537 1.39% FabArray::ParallelCopy_nowait() 41 0.03466 0.04065 0.0428 1.31% Castro::normalize_species() 62 0.03553 0.03602 0.03686 1.13% FillPatchIterator::Initialize 41 0.02824 0.03354 0.03546 1.09% StateData::FillBoundary(geom) 41 0.02748 0.03124 0.03349 1.03% Gravity::interpolate_monopole_grav() 21 0.02547 0.02592 0.02624 0.80% Castro::construct_new_gravity_source() 10 0.02184 0.02369 0.025 0.77% Castro::computeTemp() 63 0.01787 0.01815 0.01837 0.56% Castro::initialize_do_advance() 10 0.01215 0.01673 0.0178 0.55% Castro::initialize_advance() 10 0.005351 0.01061 0.01371 0.42% FabArray::setDomainBndry() 41 0.008141 0.01172 0.01364 0.42% FabArray::Saxpy() 20 0.01048 0.01266 0.01324 0.41% VisMF::Write(FabArray) 2 0.009237 0.009759 0.01222 0.37% MultiFab::contains_nan() 20 0.009709 0.0103 0.01141 0.35% Amr::writePlotFile() 2 0.007239 0.009978 0.01052 0.32% Castro::construct_old_gravity_source() 10 0.006488 0.009218 0.009799 0.30% Castro::initMFs() 1 0.006641 0.007282 0.008734 0.27% Castro::construct_new_source() 50 0.005943 0.006118 0.006329 0.19% main() 1 0.003807 0.004236 0.004655 0.14% Gravity::get_new_grav_vector() 11 0.003065 0.003648 0.003955 0.12% Gravity::get_old_grav_vector() 10 0.001569 0.002105 0.002651 0.08% Amr::coarseTimeStep() 10 0.0009836 0.001507 0.001838 0.06% Castro::finalize_do_advance() 10 0.0006752 0.001157 0.001257 0.04% AmrLevel::FillPatch() 41 0.0009295 0.00118 0.001252 0.04% Amr::timeStep() 10 0.000141 0.0001826 0.0003749 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002564 0.0002725 0.000291 0.01% Castro::do_advance_ctu() 10 0.0001357 0.0001664 0.0001927 0.01% Castro::clean_state() 62 0.0001329 0.0001508 0.0001698 0.01% FillPatchIterator::FillFromLevel0() 41 9.452e-05 0.0001079 0.0001377 0.00% StateDataPhysBCFunct::() 41 9.574e-05 0.0001087 0.0001249 0.00% FabArray::ParallelCopy() 41 8.423e-05 9.417e-05 0.000115 0.00% Castro::do_old_sources() 10 7.024e-05 9.097e-05 0.000105 0.00% Castro::Castro() 1 6.071e-05 8.63e-05 0.0001042 0.00% Amr::FinalizeInit() 1 3.442e-06 1.644e-05 0.0001005 0.00% FillPatchSingleLevel 41 6.738e-05 7.416e-05 8.799e-05 0.00% Castro::construct_old_source() 50 5.011e-05 6.506e-05 7.28e-05 0.00% Castro::do_new_sources() 10 4.987e-05 5.87e-05 6.784e-05 0.00% Castro::apply_source_to_state() 20 4.766e-05 5.481e-05 6.022e-05 0.00% Castro::subcycle_advance_ctu() 10 4.594e-05 5.286e-05 5.97e-05 0.00% Castro::construct_old_gravity() 10 3.554e-05 3.967e-05 4.626e-05 0.00% Amr::defBaseLevel() 1 3.621e-05 4.074e-05 4.483e-05 0.00% Castro::advance() 10 3.503e-05 3.948e-05 4.401e-05 0.00% Castro::construct_new_gravity() 10 2.82e-05 3.279e-05 3.996e-05 0.00% Castro::expand_state() 10 2.083e-05 2.557e-05 2.922e-05 0.00% Castro::check_for_nan() 20 2.109e-05 2.315e-05 2.658e-05 0.00% Castro::post_init() 1 1.533e-05 1.769e-05 2.13e-05 0.00% Castro::post_timestep() 10 1.483e-05 1.707e-05 1.979e-05 0.00% Castro::computeNewDt() 9 8.359e-06 9.804e-06 1.144e-05 0.00% Amr::InitializeInit() 1 5.409e-06 6.667e-06 1.1e-05 0.00% Castro::computeInitialDt() 2 5.843e-06 7.094e-06 8.181e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.275e-06 4.276e-06 5.644e-06 0.00% Amr::init() 1 1.807e-06 2.111e-06 2.603e-06 0.00% Amr::initialInit() 1 1.444e-06 1.835e-06 2.302e-06 0.00% Other 262 0.01596 0.01791 0.01953 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.264 3.265 3.266 100.00% Amr::coarseTimeStep() 10 3.042 3.042 3.042 93.15% Amr::timeStep() 10 3.029 3.03 3.03 92.79% Castro::advance() 10 3.015 3.015 3.015 92.34% Castro::subcycle_advance_ctu() 10 2.941 2.945 2.957 90.56% Castro::do_advance_ctu() 10 2.941 2.945 2.957 90.56% Castro::construct_ctu_hydro_source() 10 2.224 2.233 2.238 68.53% Gravity::make_radial_gravity() 21 0.2959 0.3029 0.3172 9.71% AmrLevel::FillPatch() 41 0.1817 0.1994 0.2137 6.54% Amr::init() 1 0.1652 0.205 0.2112 6.47% Gravity::get_new_grav_vector() 11 0.2021 0.2031 0.204 6.25% Amr::initialInit() 1 0.1504 0.1902 0.1964 6.01% Castro::construct_old_gravity() 10 0.1753 0.1806 0.1928 5.90% Gravity::get_old_grav_vector() 10 0.1746 0.1799 0.1919 5.88% FillPatchIterator::Initialize 41 0.1526 0.1653 0.1823 5.58% Castro::construct_new_gravity() 10 0.1792 0.1797 0.1802 5.52% Amr::InitializeInit() 1 0.06226 0.1311 0.1683 5.15% Amr::defBaseLevel() 1 0.06225 0.1311 0.1683 5.15% Castro::initialize_do_advance() 10 0.1521 0.162 0.1663 5.09% check_for_negative_density() 10 0.04384 0.07754 0.1507 4.61% FillPatchIterator::FillFromLevel0() 41 0.107 0.12 0.1447 4.43% FillPatchSingleLevel 41 0.1069 0.1199 0.1446 4.43% FabArray::ParallelCopy() 41 0.07665 0.08847 0.1167 3.57% Castro::expand_state() 10 0.09993 0.1111 0.1164 3.56% Castro::clean_state() 62 0.1044 0.1058 0.1072 3.28% Castro::initData() 1 0.03943 0.07427 0.106 3.25% Castro::do_old_sources() 10 0.08949 0.09379 0.1036 3.17% Castro::estTimeStep() 21 0.02442 0.06074 0.09917 3.04% Amr::FinalizeInit() 1 0.02725 0.05908 0.09483 2.90% amrex::Copy() 193 0.06481 0.08159 0.08874 2.72% FabArray::ParallelCopy_finish() 41 0.03505 0.04763 0.08183 2.51% FabArray::setVal() 143 0.05623 0.06611 0.0709 2.17% Castro::initialize_advance() 10 0.0541 0.06675 0.07084 2.17% Castro::computeInitialDt() 2 0.002546 0.03434 0.07016 2.15% Castro::do_new_sources() 10 0.05684 0.062 0.06689 2.05% Castro::computeTemp() 63 0.06266 0.0643 0.06612 2.02% Castro::reset_internal_energy(MultiFab) 63 0.04468 0.04615 0.04774 1.46% Castro::reset_internal_energy(Fab) 1008 0.04441 0.04587 0.04749 1.45% DistributionMapping::SFCProcessorMapDoIt() 1 4.968e-05 0.03985 0.04605 1.41% DistributionMapping::LeastUsedCPUs() 1 4.378e-05 0.03985 0.04604 1.41% Amr::InitAmr() 1 0.0001811 0.005844 0.04537 1.39% FabArray::ParallelCopy_nowait() 41 0.03477 0.04076 0.04291 1.31% Castro::normalize_species() 62 0.03553 0.03602 0.03686 1.13% StateDataPhysBCFunct::() 41 0.0276 0.03135 0.03359 1.03% StateData::FillBoundary(geom) 41 0.02748 0.03124 0.03349 1.03% Castro::construct_new_source() 50 0.02793 0.02981 0.03118 0.95% Gravity::interpolate_monopole_grav() 21 0.02547 0.02592 0.02624 0.80% Castro::construct_new_gravity_source() 10 0.02184 0.02369 0.025 0.77% Castro::post_init() 1 0.0245 0.02461 0.02478 0.76% Castro::finalize_do_advance() 10 0.01388 0.01834 0.0237 0.73% Amr::writePlotFile() 2 0.02241 0.02253 0.02261 0.69% Castro::post_timestep() 10 0.01411 0.01442 0.0147 0.45% FabArray::setDomainBndry() 41 0.008141 0.01172 0.01364 0.42% Castro::apply_source_to_state() 20 0.01054 0.01271 0.01329 0.41% FabArray::Saxpy() 20 0.01048 0.01266 0.01324 0.41% Castro::Castro() 1 0.01033 0.01125 0.01223 0.37% VisMF::Write(FabArray) 2 0.009237 0.009759 0.01222 0.37% Castro::check_for_nan() 20 0.00973 0.01033 0.01144 0.35% MultiFab::contains_nan() 20 0.009709 0.0103 0.01141 0.35% Castro::construct_old_source() 50 0.006538 0.009283 0.009872 0.30% Castro::construct_old_gravity_source() 10 0.006488 0.009218 0.009799 0.30% Castro::computeNewDt() 9 0.009219 0.009232 0.009238 0.28% Castro::initMFs() 1 0.006641 0.007282 0.008734 0.27% Other 262 0.02581 0.02839 0.03092 0.95% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8518 KiB 8530 KiB 8533 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6652 KiB 6659 KiB 6661 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7018 KiB 7026 KiB 7029 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4490 KiB 4496 KiB 4516 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 207 KiB 229 KiB 244 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2761 KiB 2763 KiB 2764 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 230 KiB 235 KiB 247 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 36 KiB 41 KiB 55 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 1994 KiB 1997 KiB 1997 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 79 KiB 79 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 70 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-15-g46479e6159ec) finalized