Initializing AMReX (26.01-40-gbac24575699e)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-40-gbac24575699e) initialized Starting run at 06:32:49 UTC on 2026-01-23. Successfully read inputs file ... Castro git describe: 26.01-11-g3d7eded2f AMReX git describe: 26.01-40-gbac245756 Microphysics git describe: 26.01-20-g75b00077 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014891255 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.326414564 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.338588963 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.30934304 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.309424169 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.373663464 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.296681111 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.286277138 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.287165279 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.28785324 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.290345842 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.0075432 seconds Ending run at 06:32:52 UTC on 2026-01-23. Run time = 3.32697799 Run time without initialization = 3.118624915 Average number of zones advanced per microsecond: 0.841 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.3239 ... 3.3254 ... 3.3270 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0884 2.1600 2.2234 66.83% Gravity::make_radial_gravity() 21 0.2861 0.2929 0.308 9.26% check_for_negative_density() 10 0.03233 0.09774 0.1664 5.00% Castro::estTimeStep() 21 0.02867 0.07418 0.123 3.70% Castro::initData() 1 0.03511 0.07303 0.1089 3.27% FabArray::ParallelCopy_finish() 41 0.04873 0.05793 0.09974 3.00% amrex::Copy() 193 0.06945 0.08286 0.08885 2.67% FabArray::setVal() 143 0.05443 0.06602 0.0713 2.14% Castro::reset_internal_energy(Fab) 1008 0.04031 0.04461 0.04736 1.42% FabArray::ParallelCopy_nowait() 41 0.03607 0.04037 0.04199 1.26% StateData::FillBoundary(geom) 41 0.03246 0.03391 0.03541 1.06% FillPatchIterator::Initialize 41 0.02843 0.0334 0.03536 1.06% Castro::normalize_species() 62 0.03393 0.03436 0.03511 1.06% DistributionMapping::LeastUsedCPUs() 1 4.038e-05 0.02228 0.02715 0.82% Gravity::interpolate_monopole_grav() 21 0.02465 0.02528 0.02582 0.78% Castro::construct_new_gravity_source() 10 0.02138 0.02255 0.02464 0.74% Amr::InitAmr() 1 0.0002116 0.003252 0.02394 0.72% Castro::computeTemp() 63 0.01696 0.01811 0.01909 0.57% Castro::initialize_do_advance() 10 0.01219 0.01682 0.01817 0.55% FabArray::setDomainBndry() 41 0.008632 0.01286 0.01508 0.45% Castro::initialize_advance() 10 0.005388 0.01073 0.01393 0.42% FabArray::Saxpy() 20 0.0102 0.01235 0.01335 0.40% VisMF::Write(FabArray) 2 0.00921 0.009868 0.01227 0.37% Amr::writePlotFile() 2 0.00741 0.01014 0.01096 0.33% MultiFab::contains_nan() 20 0.009241 0.009814 0.01074 0.32% Castro::initMFs() 1 0.006369 0.008367 0.01059 0.32% Castro::construct_old_gravity_source() 10 0.006574 0.009018 0.009756 0.29% Castro::construct_new_source() 50 0.005338 0.006029 0.006398 0.19% main() 1 0.004006 0.004306 0.004749 0.14% Gravity::get_new_grav_vector() 11 0.002916 0.003599 0.003993 0.12% Amr::coarseTimeStep() 10 0.0009465 0.002486 0.003351 0.10% Gravity::get_old_grav_vector() 10 0.00173 0.002151 0.002669 0.08% Castro::finalize_do_advance() 10 0.0006443 0.001134 0.001529 0.05% AmrLevel::FillPatch() 41 0.0008592 0.001012 0.001253 0.04% Amr::timeStep() 10 0.0001366 0.0001848 0.0004141 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002557 0.0002782 0.0003001 0.01% Castro::do_advance_ctu() 10 0.0001391 0.0001688 0.0002053 0.01% Castro::clean_state() 62 0.0001361 0.0001521 0.0001719 0.01% StateDataPhysBCFunct::() 41 0.0001032 0.0001135 0.0001484 0.00% FillPatchIterator::FillFromLevel0() 41 8.956e-05 0.0001066 0.000147 0.00% FabArray::ParallelCopy() 41 7.981e-05 9.359e-05 0.0001193 0.00% Castro::do_old_sources() 10 8.087e-05 9.253e-05 0.0001102 0.00% FillPatchSingleLevel 41 6.784e-05 7.832e-05 0.0001007 0.00% Castro::Castro() 1 5.438e-05 6.969e-05 9.977e-05 0.00% Castro::construct_old_source() 50 4.773e-05 6.768e-05 8.662e-05 0.00% Amr::FinalizeInit() 1 3.426e-06 1.336e-05 7.051e-05 0.00% Castro::do_new_sources() 10 5.753e-05 6.177e-05 6.784e-05 0.00% Castro::advance() 10 4.02e-05 4.635e-05 6.759e-05 0.00% Castro::construct_old_gravity() 10 3.692e-05 4.457e-05 6.415e-05 0.00% Castro::apply_source_to_state() 20 4.514e-05 5.329e-05 6.255e-05 0.00% Castro::subcycle_advance_ctu() 10 4.674e-05 5.248e-05 6.182e-05 0.00% Amr::defBaseLevel() 1 3.544e-05 4.43e-05 5.145e-05 0.00% Castro::construct_new_gravity() 10 3.057e-05 3.774e-05 4.483e-05 0.00% Castro::check_for_nan() 20 2.148e-05 2.404e-05 3.064e-05 0.00% Castro::expand_state() 10 2.046e-05 2.567e-05 3.054e-05 0.00% Castro::post_timestep() 10 1.502e-05 1.737e-05 1.927e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.039e-05 1.442e-05 1.794e-05 0.00% Castro::post_init() 1 9.3e-06 1.053e-05 1.305e-05 0.00% Castro::computeNewDt() 9 8.612e-06 9.472e-06 1.047e-05 0.00% Castro::computeInitialDt() 2 6.477e-06 7.271e-06 8.52e-06 0.00% Amr::InitializeInit() 1 2.799e-06 3.949e-06 8.053e-06 0.00% DistributionMapping::SFCProcessorMapDoIt() 1 3.955e-06 4.709e-06 5.666e-06 0.00% Amr::init() 1 1.848e-06 2.341e-06 3.074e-06 0.00% Amr::initialInit() 1 1.488e-06 1.845e-06 2.167e-06 0.00% Other 261 0.01617 0.02008 0.0231 0.69% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.324 3.325 3.327 100.00% Amr::coarseTimeStep() 10 3.106 3.106 3.106 93.37% Amr::timeStep() 10 3.09 3.091 3.092 92.94% Castro::advance() 10 3.076 3.076 3.077 92.48% Castro::subcycle_advance_ctu() 10 3.002 3.006 3.019 90.73% Castro::do_advance_ctu() 10 3.002 3.006 3.019 90.73% Castro::construct_ctu_hydro_source() 10 2.273 2.276 2.279 68.51% Gravity::make_radial_gravity() 21 0.3032 0.3096 0.322 9.68% AmrLevel::FillPatch() 41 0.1891 0.2129 0.2361 7.10% Amr::init() 1 0.1816 0.2038 0.2087 6.27% Gravity::get_new_grav_vector() 11 0.2038 0.2063 0.2076 6.24% FillPatchIterator::Initialize 41 0.1601 0.179 0.2069 6.22% Castro::construct_old_gravity() 10 0.1818 0.1868 0.1972 5.93% Gravity::get_old_grav_vector() 10 0.1811 0.1861 0.1964 5.90% Amr::initialInit() 1 0.1665 0.1887 0.1937 5.82% Castro::construct_new_gravity() 10 0.1786 0.1798 0.181 5.44% FillPatchIterator::FillFromLevel0() 41 0.1209 0.1327 0.1699 5.11% FillPatchSingleLevel 41 0.1208 0.1326 0.1697 5.10% Castro::initialize_do_advance() 10 0.156 0.1637 0.1665 5.00% check_for_negative_density() 10 0.03233 0.09774 0.1664 5.00% Amr::InitializeInit() 1 0.065 0.118 0.1595 4.80% Amr::defBaseLevel() 1 0.06499 0.118 0.1595 4.80% FabArray::ParallelCopy() 41 0.08792 0.09848 0.136 4.09% Castro::expand_state() 10 0.1052 0.1137 0.1232 3.70% Castro::estTimeStep() 21 0.02867 0.07418 0.123 3.70% Amr::FinalizeInit() 1 0.03048 0.07065 0.1124 3.38% Castro::initData() 1 0.03844 0.07645 0.1123 3.38% Castro::do_old_sources() 10 0.0915 0.1011 0.1077 3.24% Castro::clean_state() 62 0.09781 0.1031 0.1068 3.21% FabArray::ParallelCopy_finish() 41 0.04873 0.05793 0.09974 3.00% amrex::Copy() 193 0.06945 0.08286 0.08885 2.67% Castro::computeInitialDt() 2 0.002676 0.04267 0.08434 2.54% FabArray::setVal() 143 0.05443 0.06602 0.0713 2.14% Castro::initialize_advance() 10 0.05384 0.06694 0.07109 2.14% Castro::computeTemp() 63 0.05753 0.063 0.06618 1.99% Castro::do_new_sources() 10 0.05339 0.05995 0.06542 1.97% Castro::reset_internal_energy(MultiFab) 63 0.04057 0.04489 0.04763 1.43% Castro::reset_internal_energy(Fab) 1008 0.04031 0.04461 0.04736 1.42% FabArray::ParallelCopy_nowait() 41 0.03617 0.04046 0.04208 1.26% StateDataPhysBCFunct::() 41 0.03256 0.03403 0.03552 1.07% StateData::FillBoundary(geom) 41 0.03246 0.03391 0.03541 1.06% Castro::normalize_species() 62 0.03393 0.03436 0.03511 1.06% Castro::construct_new_source() 50 0.02684 0.02857 0.03092 0.93% Castro::post_init() 1 0.02767 0.02789 0.02806 0.84% Castro::finalize_do_advance() 10 0.01399 0.02071 0.02738 0.82% DistributionMapping::SFCProcessorMapDoIt() 1 4.69e-05 0.02228 0.02715 0.82% DistributionMapping::LeastUsedCPUs() 1 4.038e-05 0.02228 0.02715 0.82% Gravity::interpolate_monopole_grav() 21 0.02465 0.02528 0.02582 0.78% Castro::construct_new_gravity_source() 10 0.02138 0.02255 0.02464 0.74% Amr::InitAmr() 1 0.000215 0.003256 0.02394 0.72% Amr::writePlotFile() 2 0.02258 0.02273 0.02291 0.69% Castro::post_timestep() 10 0.01327 0.01408 0.01529 0.46% FabArray::setDomainBndry() 41 0.008632 0.01286 0.01508 0.45% Castro::Castro() 1 0.00924 0.01213 0.01483 0.45% Castro::apply_source_to_state() 20 0.01024 0.0124 0.01341 0.40% FabArray::Saxpy() 20 0.0102 0.01235 0.01335 0.40% VisMF::Write(FabArray) 2 0.00921 0.009868 0.01227 0.37% Castro::computeNewDt() 9 0.01192 0.01195 0.01196 0.36% Castro::check_for_nan() 20 0.009271 0.009838 0.01077 0.32% MultiFab::contains_nan() 20 0.009241 0.009814 0.01074 0.32% Castro::initMFs() 1 0.006369 0.008367 0.01059 0.32% Castro::construct_old_source() 50 0.006622 0.009085 0.009825 0.30% Castro::construct_old_gravity_source() 10 0.006574 0.009018 0.009756 0.29% AmrLevel::AmrLevel(dm) 1 0.005369 0.00713 0.008697 0.26% Other 261 0.0206 0.02485 0.02829 0.85% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8560 KiB 8576 KiB 8585 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6666 KiB 6673 KiB 6677 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7059 KiB 7068 KiB 7070 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4495 KiB 4504 KiB 4525 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 213 KiB 237 KiB 263 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2764 KiB 2767 KiB 2768 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 231 KiB 236 KiB 246 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 39 KiB 43 KiB 61 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2005 KiB 2008 KiB 2009 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 78 KiB 79 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 71 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-40-gbac24575699e) finalized