Initializing AMReX (26.01-40-gbac24575699e)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-40-gbac24575699e) initialized Starting run at 06:19:36 UTC on 2026-01-26. Successfully read inputs file ... Castro git describe: 26.01-11-g3d7eded2f AMReX git describe: 26.01-40-gbac245756 Microphysics git describe: 26.01-22-g1a81eec1 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015085161 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.341327871 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.311313412 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.339163408 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.303613537 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.351044703 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.297242086 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.287887583 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.287344168 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.289162002 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.289377064 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007595826 seconds Ending run at 06:19:39 UTC on 2026-01-26. Run time = 3.278394307 Run time without initialization = 3.110081367 Average number of zones advanced per microsecond: 0.843 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.2772 ... 3.2778 ... 3.2784 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0984 2.1599 2.2317 68.07% Gravity::make_radial_gravity() 21 0.2836 0.29 0.3063 9.34% check_for_negative_density() 10 0.03782 0.1126 0.1782 5.44% Castro::estTimeStep() 21 0.02679 0.0658 0.105 3.20% Castro::initData() 1 0.03445 0.07104 0.1047 3.19% amrex::Copy() 193 0.06243 0.07873 0.08766 2.67% FabArray::ParallelCopy_finish() 41 0.03804 0.04795 0.08613 2.63% FabArray::setVal() 143 0.05328 0.0657 0.07165 2.19% Castro::reset_internal_energy(Fab) 1008 0.04248 0.04461 0.04613 1.41% FabArray::ParallelCopy_nowait() 41 0.03418 0.03966 0.04158 1.27% Castro::normalize_species() 62 0.03338 0.03423 0.0357 1.09% StateData::FillBoundary(geom) 41 0.02947 0.03289 0.03545 1.08% FillPatchIterator::Initialize 41 0.02714 0.03209 0.03476 1.06% Gravity::interpolate_monopole_grav() 21 0.02491 0.02517 0.02548 0.78% Castro::construct_new_gravity_source() 10 0.02151 0.02294 0.02507 0.76% Castro::computeTemp() 63 0.01703 0.01796 0.01844 0.56% Castro::initialize_do_advance() 10 0.01132 0.01584 0.01727 0.53% FabArray::setDomainBndry() 41 0.008309 0.01186 0.01447 0.44% Castro::initialize_advance() 10 0.005284 0.01063 0.01346 0.41% FabArray::Saxpy() 20 0.0107 0.01256 0.01338 0.41% VisMF::Write(FabArray) 2 0.009136 0.009716 0.01315 0.40% Amr::writePlotFile() 2 0.007648 0.009795 0.01094 0.33% MultiFab::contains_nan() 20 0.008773 0.009397 0.01039 0.32% Castro::construct_old_gravity_source() 10 0.006676 0.009224 0.009671 0.29% Castro::initMFs() 1 0.006687 0.00721 0.00801 0.24% Castro::enforce_min_density() 62 0.005943 0.006258 0.006554 0.20% Castro::construct_new_source() 50 0.005419 0.005948 0.006106 0.19% main() 1 0.004112 0.004216 0.004344 0.13% Gravity::get_new_grav_vector() 11 0.002791 0.00348 0.003886 0.12% Gravity::get_old_grav_vector() 10 0.001591 0.001969 0.002394 0.07% Amr::coarseTimeStep() 10 0.001179 0.00182 0.0021 0.06% Castro::finalize_do_advance() 10 0.0005795 0.001125 0.001304 0.04% AmrLevel::FillPatch() 41 0.0007676 0.001037 0.001158 0.04% Amr::timeStep() 10 0.0001327 0.0001744 0.0003735 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002567 0.0002709 0.0002843 0.01% Castro::do_advance_ctu() 10 0.0001354 0.0001495 0.0001731 0.01% Castro::clean_state() 62 0.0001269 0.0001418 0.0001483 0.00% StateDataPhysBCFunct::() 41 9.305e-05 9.979e-05 0.000103 0.00% FillPatchIterator::FillFromLevel0() 41 8.537e-05 9.445e-05 0.0001011 0.00% FabArray::ParallelCopy() 41 7.578e-05 8.586e-05 9.664e-05 0.00% Castro::do_old_sources() 10 6.727e-05 8.221e-05 9.294e-05 0.00% FillPatchSingleLevel 41 6.246e-05 7.05e-05 8.734e-05 0.00% Castro::Castro() 1 5.673e-05 6.875e-05 8.614e-05 0.00% Amr::FinalizeInit() 1 3.458e-06 1.483e-05 8.237e-05 0.00% Castro::construct_old_source() 50 4.518e-05 6.301e-05 7.417e-05 0.00% Castro::subcycle_advance_ctu() 10 4.106e-05 5.119e-05 6.274e-05 0.00% Castro::do_new_sources() 10 4.822e-05 5.537e-05 5.945e-05 0.00% Castro::apply_source_to_state() 20 3.857e-05 4.604e-05 5.325e-05 0.00% Castro::advance() 10 3.553e-05 4.172e-05 5.001e-05 0.00% Amr::defBaseLevel() 1 3.36e-05 4.28e-05 4.86e-05 0.00% Castro::construct_old_gravity() 10 3.283e-05 3.66e-05 4.268e-05 0.00% Castro::construct_new_gravity() 10 2.844e-05 3.466e-05 4.152e-05 0.00% Castro::expand_state() 10 1.83e-05 2.226e-05 2.685e-05 0.00% Castro::check_for_nan() 20 2.09e-05 2.273e-05 2.393e-05 0.00% Castro::post_timestep() 10 1.512e-05 1.675e-05 1.938e-05 0.00% Castro::computeNewDt() 9 8.516e-06 9.11e-06 1.044e-05 0.00% Castro::post_init() 1 8.319e-06 9.349e-06 1.025e-05 0.00% Castro::computeInitialDt() 2 6.282e-06 7.422e-06 9.316e-06 0.00% Amr::InitializeInit() 1 2.588e-06 3.552e-06 7.074e-06 0.00% Amr::init() 1 2.059e-06 2.327e-06 2.732e-06 0.00% Amr::initialInit() 1 1.484e-06 1.772e-06 2.247e-06 0.00% Other 203 0.00929 0.01277 0.01475 0.45% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.277 3.278 3.278 100.00% Amr::coarseTimeStep() 10 3.098 3.098 3.098 94.50% Amr::timeStep() 10 3.085 3.085 3.086 94.12% Castro::advance() 10 3.071 3.071 3.072 93.69% Castro::subcycle_advance_ctu() 10 2.998 3.002 3.017 92.02% Castro::do_advance_ctu() 10 2.998 3.002 3.017 92.02% Castro::construct_ctu_hydro_source() 10 2.288 2.291 2.295 70.02% Gravity::make_radial_gravity() 21 0.3007 0.3064 0.3192 9.74% AmrLevel::FillPatch() 41 0.1835 0.1973 0.2097 6.40% Gravity::get_new_grav_vector() 11 0.2051 0.2068 0.208 6.34% Castro::construct_old_gravity() 10 0.1747 0.1797 0.1902 5.80% Gravity::get_old_grav_vector() 10 0.1741 0.179 0.1896 5.78% Castro::construct_new_gravity() 10 0.1838 0.1846 0.1858 5.67% FillPatchIterator::Initialize 41 0.1528 0.1649 0.1857 5.66% check_for_negative_density() 10 0.03782 0.1126 0.1782 5.44% Amr::init() 1 0.1668 0.1675 0.1679 5.12% Castro::initialize_do_advance() 10 0.1523 0.159 0.1628 4.97% Amr::initialInit() 1 0.1516 0.153 0.1538 4.69% FillPatchIterator::FillFromLevel0() 41 0.1126 0.121 0.1502 4.58% FillPatchSingleLevel 41 0.1125 0.1209 0.1501 4.58% Amr::InitializeInit() 1 0.05557 0.0923 0.1264 3.86% Amr::defBaseLevel() 1 0.05557 0.0923 0.1264 3.86% FabArray::ParallelCopy() 41 0.07889 0.0878 0.1205 3.68% Castro::expand_state() 10 0.1015 0.1105 0.1193 3.64% Castro::initData() 1 0.03818 0.07474 0.108 3.30% Castro::estTimeStep() 21 0.02679 0.0658 0.105 3.20% Castro::clean_state() 62 0.1001 0.1026 0.1047 3.19% Amr::FinalizeInit() 1 0.02648 0.06068 0.09809 2.99% Castro::do_old_sources() 10 0.08883 0.09114 0.09404 2.87% amrex::Copy() 193 0.06243 0.07873 0.08766 2.67% FabArray::ParallelCopy_finish() 41 0.03804 0.04795 0.08613 2.63% Castro::computeInitialDt() 2 0.002436 0.03695 0.07416 2.26% FabArray::setVal() 143 0.05328 0.0657 0.07165 2.19% Castro::initialize_advance() 10 0.05053 0.06608 0.07009 2.14% Castro::do_new_sources() 10 0.05558 0.06052 0.06694 2.04% Castro::computeTemp() 63 0.06011 0.06285 0.06458 1.97% Castro::reset_internal_energy(MultiFab) 63 0.04276 0.04488 0.0464 1.42% Castro::reset_internal_energy(Fab) 1008 0.04248 0.04461 0.04613 1.41% FabArray::ParallelCopy_nowait() 41 0.03429 0.03976 0.04167 1.27% Castro::normalize_species() 62 0.03338 0.03423 0.0357 1.09% StateDataPhysBCFunct::() 41 0.02956 0.03299 0.03555 1.08% StateData::FillBoundary(geom) 41 0.02947 0.03289 0.03545 1.08% Castro::construct_new_source() 50 0.02693 0.02889 0.03118 0.95% Gravity::interpolate_monopole_grav() 21 0.02491 0.02517 0.02548 0.78% Castro::construct_new_gravity_source() 10 0.02151 0.02294 0.02507 0.76% Castro::finalize_do_advance() 10 0.01317 0.01994 0.025 0.76% Castro::post_init() 1 0.02263 0.02349 0.02385 0.73% Amr::writePlotFile() 2 0.02182 0.02215 0.02292 0.70% FabArray::setDomainBndry() 41 0.008309 0.01186 0.01447 0.44% Castro::post_timestep() 10 0.01325 0.01375 0.01415 0.43% Castro::apply_source_to_state() 20 0.01074 0.0126 0.01343 0.41% FabArray::Saxpy() 20 0.0107 0.01256 0.01338 0.41% VisMF::Write(FabArray) 2 0.009136 0.009716 0.01315 0.40% Castro::Castro() 1 0.01026 0.01103 0.01188 0.36% Castro::check_for_nan() 20 0.008795 0.00942 0.01041 0.32% MultiFab::contains_nan() 20 0.008773 0.009397 0.01039 0.32% Castro::computeNewDt() 9 0.01004 0.01006 0.01007 0.31% Castro::construct_old_source() 50 0.006721 0.009287 0.009736 0.30% Castro::construct_old_gravity_source() 10 0.006676 0.009224 0.009671 0.29% Castro::initMFs() 1 0.006687 0.00721 0.00801 0.24% Castro::enforce_min_density() 62 0.005943 0.006258 0.006554 0.20% Other 203 0.01931 0.02396 0.0271 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8639 KiB 8650 KiB 8654 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6752 KiB 6756 KiB 6757 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7117 KiB 7125 KiB 7127 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4560 KiB 4565 KiB 4584 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 209 KiB 226 KiB 243 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2800 KiB 2804 KiB 2805 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 233 KiB 237 KiB 247 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 41 KiB 58 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2025 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 80 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 70 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-40-gbac24575699e) finalized