Initializing AMReX (26.01-40-gbac24575699e)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.01-40-gbac24575699e) initialized Starting run at 06:17:24 UTC on 2026-01-30. Successfully read inputs file ... Castro git describe: 26.01-14-ge93df5b44 AMReX git describe: 26.01-40-gbac245756 Microphysics git describe: 26.01-27-gbd727351 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01449719 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.340275226 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.328326577 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.307095641 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.306304804 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.349488168 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.298101215 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.285570934 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.286257459 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.286006103 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.286255647 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007784547 seconds Ending run at 06:17:27 UTC on 2026-01-30. Run time = 3.271440544 Run time without initialization = 3.086694809 Average number of zones advanced per microsecond: 0.849 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.2699 ... 3.2708 ... 3.2721 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1297 2.1502 2.1893 66.91% Gravity::make_radial_gravity() 21 0.2842 0.2918 0.3043 9.30% check_for_negative_density() 10 0.0506 0.09353 0.117 3.58% Castro::initData() 1 0.03459 0.07025 0.1162 3.55% Castro::estTimeStep() 21 0.03707 0.07933 0.1124 3.43% amrex::Copy() 193 0.06554 0.07817 0.08703 2.66% FabArray::ParallelCopy_finish() 41 0.03979 0.04657 0.07707 2.36% FabArray::setVal() 143 0.0553 0.06646 0.0718 2.19% Castro::reset_internal_energy(Fab) 1008 0.04146 0.04544 0.04669 1.43% Castro::normalize_species() 62 0.03414 0.03743 0.04259 1.30% FabArray::ParallelCopy_nowait() 41 0.03496 0.03982 0.04175 1.28% StateData::FillBoundary(geom) 41 0.03071 0.03325 0.03595 1.10% FillPatchIterator::Initialize 41 0.0287 0.03181 0.03385 1.03% Gravity::interpolate_monopole_grav() 21 0.02476 0.02496 0.02521 0.77% Castro::construct_new_gravity_source() 10 0.02173 0.02288 0.02451 0.75% Castro::computeTemp() 63 0.01768 0.01839 0.01892 0.58% Castro::initialize_do_advance() 10 0.01242 0.01643 0.01755 0.54% FabArray::setDomainBndry() 41 0.009314 0.01172 0.01419 0.43% FabArray::Saxpy() 20 0.01071 0.01265 0.0138 0.42% Castro::initialize_advance() 10 0.005392 0.01075 0.01356 0.41% VisMF::Write(FabArray) 2 0.009144 0.009684 0.01205 0.37% MultiFab::contains_nan() 20 0.008518 0.009724 0.01099 0.34% Amr::writePlotFile() 2 0.007415 0.0101 0.01069 0.33% Castro::construct_old_gravity_source() 10 0.006859 0.009563 0.01019 0.31% Castro::initMFs() 1 0.006453 0.007127 0.008135 0.25% Castro::enforce_min_density() 62 0.005981 0.006439 0.007291 0.22% Castro::construct_new_source() 50 0.005567 0.006118 0.006331 0.19% main() 1 0.003482 0.004013 0.004797 0.15% Amr::coarseTimeStep() 10 0.002458 0.003872 0.004723 0.14% Gravity::get_new_grav_vector() 11 0.003021 0.003315 0.003725 0.11% Gravity::get_old_grav_vector() 10 0.001623 0.002077 0.002653 0.08% Castro::finalize_do_advance() 10 0.0006214 0.001105 0.001284 0.04% AmrLevel::FillPatch() 41 0.00085 0.00104 0.001135 0.03% Amr::timeStep() 10 0.0001358 0.0001842 0.0004303 0.01% Castro::reset_internal_energy(MultiFab) 63 0.000253 0.0002685 0.0003065 0.01% Castro::do_advance_ctu() 10 0.0001391 0.0001629 0.0002019 0.01% Castro::clean_state() 62 0.0001207 0.0001407 0.000152 0.00% FillPatchIterator::FillFromLevel0() 41 8.954e-05 0.0001045 0.0001219 0.00% StateDataPhysBCFunct::() 41 8.976e-05 0.0001 0.0001117 0.00% Castro::do_old_sources() 10 7.504e-05 8.953e-05 0.0001011 0.00% FabArray::ParallelCopy() 41 8.176e-05 8.987e-05 9.666e-05 0.00% Castro::Castro() 1 5.613e-05 7.024e-05 9.076e-05 0.00% FillPatchSingleLevel 41 6.632e-05 7.441e-05 8.148e-05 0.00% Castro::construct_old_source() 50 4.902e-05 6.716e-05 7.665e-05 0.00% Castro::apply_source_to_state() 20 4.528e-05 5.184e-05 7.185e-05 0.00% Castro::subcycle_advance_ctu() 10 4.295e-05 5.628e-05 6.973e-05 0.00% Amr::FinalizeInit() 1 3.976e-06 1.462e-05 6.805e-05 0.00% Castro::do_new_sources() 10 4.534e-05 5.696e-05 6.592e-05 0.00% Castro::advance() 10 4.063e-05 4.683e-05 6.401e-05 0.00% Castro::construct_old_gravity() 10 3.552e-05 4.135e-05 4.726e-05 0.00% Amr::defBaseLevel() 1 3.261e-05 3.749e-05 4.646e-05 0.00% Castro::construct_new_gravity() 10 2.934e-05 3.393e-05 4.253e-05 0.00% Castro::check_for_nan() 20 2.037e-05 2.483e-05 2.917e-05 0.00% Castro::expand_state() 10 1.954e-05 2.405e-05 2.846e-05 0.00% Castro::post_init() 1 7.913e-06 1.147e-05 2.598e-05 0.00% Castro::post_timestep() 10 1.531e-05 1.837e-05 2.158e-05 0.00% Castro::computeNewDt() 9 8.588e-06 9.523e-06 1.149e-05 0.00% Castro::computeInitialDt() 2 6.107e-06 7.63e-06 8.686e-06 0.00% Amr::InitializeInit() 1 2.43e-06 3.205e-06 5.328e-06 0.00% Amr::init() 1 1.914e-06 2.243e-06 2.442e-06 0.00% Amr::initialInit() 1 1.537e-06 1.919e-06 2.305e-06 0.00% Other 203 0.01041 0.01295 0.01491 0.46% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.27 3.271 3.272 100.00% Amr::coarseTimeStep() 10 3.074 3.074 3.074 93.95% Amr::timeStep() 10 3.058 3.059 3.06 93.52% Castro::advance() 10 3.043 3.044 3.044 93.03% Castro::subcycle_advance_ctu() 10 2.969 2.972 2.985 91.23% Castro::do_advance_ctu() 10 2.969 2.972 2.985 91.22% Castro::construct_ctu_hydro_source() 10 2.259 2.263 2.266 69.25% Gravity::make_radial_gravity() 21 0.3003 0.3079 0.3185 9.73% Gravity::get_new_grav_vector() 11 0.2078 0.2084 0.2095 6.40% AmrLevel::FillPatch() 41 0.1794 0.1955 0.209 6.39% Castro::construct_old_gravity() 10 0.1741 0.1793 0.1889 5.77% Gravity::get_old_grav_vector() 10 0.1733 0.1786 0.1881 5.75% Amr::init() 1 0.1837 0.1844 0.1849 5.65% FillPatchIterator::Initialize 41 0.1509 0.1636 0.1838 5.62% Castro::construct_new_gravity() 10 0.1807 0.1815 0.1831 5.60% Amr::initialInit() 1 0.1691 0.1697 0.1702 5.20% Castro::initialize_do_advance() 10 0.1527 0.158 0.1611 4.92% FillPatchIterator::FillFromLevel0() 41 0.112 0.1201 0.1446 4.42% FillPatchSingleLevel 41 0.1119 0.12 0.1445 4.42% Amr::InitializeInit() 1 0.05561 0.09161 0.1379 4.22% Amr::defBaseLevel() 1 0.0556 0.09161 0.1379 4.22% Castro::initData() 1 0.03862 0.07398 0.1197 3.66% check_for_negative_density() 10 0.0506 0.09353 0.117 3.58% Castro::expand_state() 10 0.1006 0.1085 0.1166 3.56% Amr::FinalizeInit() 1 0.03113 0.07812 0.1145 3.50% Castro::clean_state() 62 0.1027 0.1072 0.1136 3.47% Castro::estTimeStep() 21 0.03707 0.07933 0.1124 3.43% FabArray::ParallelCopy() 41 0.081 0.08658 0.1123 3.43% Castro::do_old_sources() 10 0.0877 0.09309 0.09708 2.97% amrex::Copy() 193 0.06554 0.07817 0.08703 2.66% Castro::computeInitialDt() 2 0.002688 0.04979 0.08615 2.63% FabArray::ParallelCopy_finish() 41 0.03979 0.04657 0.07707 2.36% Castro::initialize_advance() 10 0.05495 0.06794 0.07185 2.20% FabArray::setVal() 143 0.0553 0.06646 0.0718 2.19% Castro::do_new_sources() 10 0.05686 0.06128 0.06669 2.04% Castro::computeTemp() 63 0.0594 0.0641 0.06581 2.01% Castro::reset_internal_energy(MultiFab) 63 0.04173 0.04571 0.04696 1.44% Castro::reset_internal_energy(Fab) 1008 0.04146 0.04544 0.04669 1.43% Castro::normalize_species() 62 0.03414 0.03743 0.04259 1.30% FabArray::ParallelCopy_nowait() 41 0.03509 0.03992 0.04183 1.28% StateDataPhysBCFunct::() 41 0.03082 0.03335 0.03606 1.10% StateData::FillBoundary(geom) 41 0.03071 0.03325 0.03595 1.10% Castro::construct_new_source() 50 0.02737 0.029 0.0307 0.94% Castro::post_init() 1 0.02797 0.02816 0.02825 0.86% Gravity::interpolate_monopole_grav() 21 0.02476 0.02496 0.02521 0.77% Castro::finalize_do_advance() 10 0.01475 0.02037 0.02473 0.76% Castro::construct_new_gravity_source() 10 0.02173 0.02288 0.02451 0.75% Amr::writePlotFile() 2 0.02243 0.02257 0.02272 0.69% Castro::post_timestep() 10 0.01384 0.01469 0.01578 0.48% FabArray::setDomainBndry() 41 0.009314 0.01172 0.01419 0.43% Castro::apply_source_to_state() 20 0.01076 0.0127 0.01385 0.42% FabArray::Saxpy() 20 0.01071 0.01265 0.0138 0.42% VisMF::Write(FabArray) 2 0.009144 0.009684 0.01205 0.37% Castro::Castro() 1 0.01004 0.01091 0.01182 0.36% Castro::check_for_nan() 20 0.008542 0.009749 0.01102 0.34% MultiFab::contains_nan() 20 0.008518 0.009724 0.01099 0.34% Castro::computeNewDt() 9 0.01028 0.01029 0.0103 0.31% Castro::construct_old_source() 50 0.006908 0.009631 0.01026 0.31% Castro::construct_old_gravity_source() 10 0.006859 0.009563 0.01019 0.31% Castro::initMFs() 1 0.006453 0.007127 0.008135 0.25% Castro::enforce_min_density() 62 0.005981 0.006439 0.007291 0.22% Other 203 0.02042 0.0245 0.02789 0.85% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 2 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8640 KiB 8648 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6710 KiB 6717 KiB 6721 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7115 KiB 7124 KiB 7126 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4524 KiB 4529 KiB 4550 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 205 KiB 224 KiB 241 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2781 KiB 2784 KiB 2785 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 233 KiB 239 KiB 247 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 40 KiB 53 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 81 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 67 KiB 70 KiB 73 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.01-40-gbac24575699e) finalized