Initializing AMReX (26.02-3-gfc7d9e75fc28)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.02-3-gfc7d9e75fc28) initialized Starting run at 06:23:34 UTC on 2026-02-03. Successfully read inputs file ... Castro git describe: 26.02 AMReX git describe: 26.02-3-gfc7d9e75f Microphysics git describe: 26.02 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015741759 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.342837294 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.319471629 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.30302462 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.30143921 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.355992381 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.294095549 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.284741425 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.285743818 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.285479255 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.284312371 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007505021 seconds Ending run at 06:23:37 UTC on 2026-02-03. Run time = 3.235765013 Run time without initialization = 3.070173283 Average number of zones advanced per microsecond: 0.854 Average number of zones advanced per microsecond per rank: 0.107 TinyProfiler total time across processes [min...avg...max]: 3.2342 ... 3.2351 ... 3.2358 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0985 2.1550 2.1896 67.67% Gravity::make_radial_gravity() 21 0.2833 0.2888 0.3046 9.41% check_for_negative_density() 10 0.03784 0.07656 0.137 4.23% Castro::initData() 1 0.04149 0.07019 0.09981 3.08% Castro::estTimeStep() 21 0.02677 0.06128 0.0909 2.81% amrex::Copy() 193 0.06402 0.07846 0.08496 2.63% FabArray::ParallelCopy_finish() 41 0.03859 0.0483 0.08467 2.62% FabArray::setVal() 143 0.05563 0.06627 0.07163 2.21% Castro::reset_internal_energy(Fab) 1008 0.04247 0.04513 0.04623 1.43% FabArray::ParallelCopy_nowait() 41 0.03493 0.03946 0.04124 1.27% StateData::FillBoundary(geom) 41 0.02983 0.03315 0.03588 1.11% Castro::normalize_species() 62 0.03342 0.03403 0.03471 1.07% FillPatchIterator::Initialize 41 0.02753 0.03202 0.03452 1.07% Gravity::interpolate_monopole_grav() 21 0.02455 0.02488 0.02528 0.78% Castro::construct_new_gravity_source() 10 0.02169 0.02299 0.0245 0.76% Castro::computeTemp() 63 0.01729 0.01813 0.0188 0.58% Castro::initialize_do_advance() 10 0.01181 0.01653 0.01794 0.55% FabArray::setDomainBndry() 41 0.008416 0.01245 0.01554 0.48% Castro::initialize_advance() 10 0.00538 0.01082 0.01403 0.43% VisMF::Write(FabArray) 2 0.009078 0.009978 0.01381 0.43% FabArray::Saxpy() 20 0.01084 0.0127 0.01351 0.42% Amr::writePlotFile() 2 0.007552 0.01043 0.01118 0.35% MultiFab::contains_nan() 20 0.008811 0.009759 0.01077 0.33% Castro::construct_old_gravity_source() 10 0.007046 0.009576 0.01014 0.31% Castro::initMFs() 1 0.00639 0.007007 0.008369 0.26% Castro::enforce_min_density() 62 0.006045 0.00638 0.006752 0.21% Castro::construct_new_source() 50 0.005612 0.006105 0.006443 0.20% main() 1 0.003722 0.004345 0.004777 0.15% Gravity::get_new_grav_vector() 11 0.002825 0.00347 0.003982 0.12% Amr::coarseTimeStep() 10 0.00131 0.002018 0.002748 0.08% Gravity::get_old_grav_vector() 10 0.001566 0.001986 0.002517 0.08% Castro::finalize_do_advance() 10 0.0005237 0.001176 0.0013 0.04% AmrLevel::FillPatch() 41 0.0007875 0.001022 0.001181 0.04% Amr::timeStep() 10 0.0001287 0.000172 0.0003677 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002528 0.000271 0.0002916 0.01% Castro::do_advance_ctu() 10 0.0001239 0.0001497 0.0001647 0.01% Castro::clean_state() 62 0.0001387 0.0001501 0.0001628 0.01% StateDataPhysBCFunct::() 41 9.572e-05 0.0001041 0.0001134 0.00% FillPatchIterator::FillFromLevel0() 41 8.64e-05 9.784e-05 0.0001064 0.00% Castro::do_old_sources() 10 7.025e-05 8.381e-05 9.519e-05 0.00% FabArray::ParallelCopy() 41 8.283e-05 8.946e-05 9.434e-05 0.00% Castro::Castro() 1 5.386e-05 7.207e-05 8.911e-05 0.00% Castro::construct_old_source() 50 4.797e-05 6.822e-05 7.576e-05 0.00% FillPatchSingleLevel 41 6.552e-05 6.759e-05 7.476e-05 0.00% Castro::advance() 10 3.604e-05 4.598e-05 7.216e-05 0.00% Amr::FinalizeInit() 1 4.114e-06 1.351e-05 6.83e-05 0.00% Castro::do_new_sources() 10 4.825e-05 5.631e-05 6.657e-05 0.00% Castro::subcycle_advance_ctu() 10 4.121e-05 5.256e-05 6.471e-05 0.00% Castro::apply_source_to_state() 20 3.839e-05 4.818e-05 5.301e-05 0.00% Amr::defBaseLevel() 1 4.251e-05 4.608e-05 4.951e-05 0.00% Castro::construct_old_gravity() 10 3.38e-05 3.84e-05 4.647e-05 0.00% Castro::construct_new_gravity() 10 3.032e-05 3.387e-05 4.062e-05 0.00% Castro::expand_state() 10 1.833e-05 2.241e-05 2.782e-05 0.00% Castro::check_for_nan() 20 1.993e-05 2.323e-05 2.587e-05 0.00% Castro::post_timestep() 10 1.627e-05 1.831e-05 2.306e-05 0.00% Castro::post_init() 1 7.934e-06 9.949e-06 1.687e-05 0.00% Amr::initialInit() 1 1.382e-06 2.754e-06 1.029e-05 0.00% Castro::computeNewDt() 9 7.576e-06 8.982e-06 1.022e-05 0.00% Castro::computeInitialDt() 2 5.897e-06 7.385e-06 8.977e-06 0.00% Amr::InitializeInit() 1 2.603e-06 3.834e-06 6.34e-06 0.00% Amr::init() 1 1.713e-06 2.065e-06 2.496e-06 0.00% Other 203 0.009182 0.01302 0.01525 0.47% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.234 3.235 3.236 100.00% Amr::coarseTimeStep() 10 3.058 3.058 3.058 94.50% Amr::timeStep() 10 3.044 3.044 3.045 94.11% Castro::advance() 10 3.03 3.03 3.031 93.66% Castro::subcycle_advance_ctu() 10 2.956 2.96 2.975 91.94% Castro::do_advance_ctu() 10 2.955 2.96 2.975 91.94% Castro::construct_ctu_hydro_source() 10 2.246 2.25 2.255 69.67% Gravity::make_radial_gravity() 21 0.2993 0.305 0.3184 9.84% AmrLevel::FillPatch() 41 0.1845 0.1981 0.2104 6.50% Gravity::get_new_grav_vector() 11 0.2054 0.2066 0.2079 6.42% Castro::construct_old_gravity() 10 0.1726 0.1778 0.1894 5.85% Gravity::get_old_grav_vector() 10 0.1719 0.1771 0.1887 5.83% FillPatchIterator::Initialize 41 0.1535 0.1658 0.1858 5.74% Castro::construct_new_gravity() 10 0.1811 0.1819 0.1827 5.65% Amr::init() 1 0.1641 0.165 0.1653 5.11% Castro::initialize_do_advance() 10 0.1528 0.1609 0.1652 5.10% Amr::initialInit() 1 0.1482 0.1496 0.15 4.63% FillPatchIterator::FillFromLevel0() 41 0.1135 0.1214 0.1499 4.63% FillPatchSingleLevel 41 0.1134 0.1213 0.1498 4.63% check_for_negative_density() 10 0.03784 0.07656 0.137 4.23% Amr::InitializeInit() 1 0.06367 0.09142 0.1211 3.74% Amr::defBaseLevel() 1 0.06366 0.09141 0.1211 3.74% FabArray::ParallelCopy() 41 0.07866 0.08794 0.1198 3.70% Castro::expand_state() 10 0.1025 0.1112 0.1198 3.70% Castro::clean_state() 62 0.09899 0.1032 0.1058 3.27% Castro::initData() 1 0.04513 0.07383 0.1036 3.20% Castro::do_old_sources() 10 0.08858 0.09225 0.09568 2.96% Castro::estTimeStep() 21 0.02677 0.06128 0.0909 2.81% Amr::FinalizeInit() 1 0.02869 0.05815 0.08557 2.64% amrex::Copy() 193 0.06402 0.07846 0.08496 2.63% FabArray::ParallelCopy_finish() 41 0.03859 0.0483 0.08467 2.62% Castro::initialize_advance() 10 0.05144 0.06686 0.07165 2.21% FabArray::setVal() 143 0.05563 0.06627 0.07163 2.21% Castro::do_new_sources() 10 0.05723 0.06074 0.06568 2.03% Castro::computeTemp() 63 0.06001 0.06353 0.06531 2.02% Castro::computeInitialDt() 2 0.002573 0.032 0.05918 1.83% Castro::reset_internal_energy(MultiFab) 63 0.04272 0.0454 0.04651 1.44% Castro::reset_internal_energy(Fab) 1008 0.04247 0.04513 0.04623 1.43% FabArray::ParallelCopy_nowait() 41 0.03503 0.03955 0.04132 1.28% StateDataPhysBCFunct::() 41 0.02992 0.03325 0.03598 1.11% StateData::FillBoundary(geom) 41 0.02983 0.03315 0.03588 1.11% Castro::normalize_species() 62 0.03342 0.03403 0.03471 1.07% Castro::construct_new_source() 50 0.0278 0.02909 0.03092 0.96% Castro::post_init() 1 0.02552 0.02607 0.02634 0.81% Gravity::interpolate_monopole_grav() 21 0.02455 0.02488 0.02528 0.78% Castro::finalize_do_advance() 10 0.01525 0.02041 0.02493 0.77% Castro::construct_new_gravity_source() 10 0.02169 0.02299 0.0245 0.76% Amr::writePlotFile() 2 0.02277 0.02301 0.0235 0.73% FabArray::setDomainBndry() 41 0.008416 0.01245 0.01554 0.48% Castro::post_timestep() 10 0.01332 0.01395 0.0144 0.45% VisMF::Write(FabArray) 2 0.009078 0.009978 0.01381 0.43% Castro::apply_source_to_state() 20 0.01088 0.01275 0.01355 0.42% FabArray::Saxpy() 20 0.01084 0.0127 0.01351 0.42% Castro::Castro() 1 0.009708 0.01079 0.01167 0.36% Castro::check_for_nan() 20 0.008831 0.009783 0.01079 0.33% MultiFab::contains_nan() 20 0.008811 0.009759 0.01077 0.33% Castro::construct_old_source() 50 0.007094 0.009645 0.01021 0.32% Castro::construct_old_gravity_source() 10 0.007046 0.009576 0.01014 0.31% Castro::computeNewDt() 9 0.01005 0.01006 0.01009 0.31% Castro::initMFs() 1 0.00639 0.007007 0.008369 0.26% Castro::enforce_min_density() 62 0.006045 0.00638 0.006752 0.21% Other 203 0.01896 0.02447 0.02817 0.87% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8636 KiB 8648 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6752 KiB 6755 KiB 6756 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7115 KiB 7124 KiB 7126 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4554 KiB 4561 KiB 4580 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 213 KiB 230 KiB 247 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2799 KiB 2803 KiB 2804 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 235 KiB 239 KiB 250 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 41 KiB 58 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 81 KiB 82 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 70 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.02-3-gfc7d9e75fc28) finalized