Initializing AMReX (26.02-3-gfc7d9e75fc28)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.02-3-gfc7d9e75fc28) initialized Starting run at 06:24:10 UTC on 2026-02-04. Successfully read inputs file ... Castro git describe: 26.02 AMReX git describe: 26.02-3-gfc7d9e75f Microphysics git describe: 26.02-1-g64af4cfc reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014182442 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.330623665 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.330973383 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.322940162 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.309703647 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.376870835 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.299048142 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.289556635 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.288912482 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.288081275 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.290580325 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007498035 seconds Ending run at 06:24:13 UTC on 2026-02-04. Run time = 3.331130402 Run time without initialization = 3.140021212 Average number of zones advanced per microsecond: 0.835 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.3263 ... 3.3287 ... 3.3317 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0909 2.1575 2.2310 66.96% Gravity::make_radial_gravity() 21 0.28 0.2882 0.3067 9.20% check_for_negative_density() 10 0.0382 0.1106 0.1759 5.28% Castro::estTimeStep() 21 0.02514 0.08032 0.1246 3.74% Castro::initData() 1 0.03479 0.07509 0.1201 3.60% FabArray::ParallelCopy_finish() 41 0.04241 0.07058 0.1183 3.55% amrex::Copy() 193 0.06701 0.08256 0.09608 2.88% FabArray::setVal() 143 0.0512 0.06424 0.07115 2.14% Castro::normalize_species() 62 0.03356 0.03657 0.04793 1.44% Castro::reset_internal_energy(Fab) 1008 0.04525 0.04609 0.04758 1.43% FabArray::ParallelCopy_nowait() 41 0.03333 0.03931 0.04206 1.26% FillPatchIterator::Initialize 41 0.02733 0.0336 0.03863 1.16% StateData::FillBoundary(geom) 41 0.03116 0.03348 0.03582 1.08% Gravity::interpolate_monopole_grav() 21 0.02498 0.02579 0.02981 0.89% Castro::construct_new_gravity_source() 10 0.02106 0.02249 0.02501 0.75% Castro::computeTemp() 63 0.01809 0.0185 0.019 0.57% FabArray::Saxpy() 20 0.01023 0.01295 0.01866 0.56% Castro::initialize_do_advance() 10 0.01132 0.01641 0.01786 0.54% FabArray::setDomainBndry() 41 0.008324 0.01261 0.01527 0.46% Castro::initialize_advance() 10 0.00529 0.01059 0.01325 0.40% VisMF::Write(FabArray) 2 0.008849 0.009571 0.01193 0.36% Amr::writePlotFile() 2 0.006962 0.009576 0.01167 0.35% MultiFab::contains_nan() 20 0.00951 0.01004 0.01107 0.33% Castro::construct_old_gravity_source() 10 0.006423 0.00906 0.01085 0.33% Castro::initMFs() 1 0.006213 0.008289 0.01038 0.31% StateData::define() 4 0.005211 0.006849 0.008455 0.25% Castro::construct_new_source() 50 0.005436 0.006048 0.006236 0.19% main() 1 0.003396 0.004175 0.004595 0.14% Gravity::get_new_grav_vector() 11 0.00281 0.003499 0.003942 0.12% Amr::coarseTimeStep() 10 0.0008844 0.002736 0.003572 0.11% Gravity::get_old_grav_vector() 10 0.001544 0.002202 0.002807 0.08% Castro::finalize_do_advance() 10 0.0006048 0.001083 0.001202 0.04% AmrLevel::FillPatch() 41 0.0008 0.0009412 0.001044 0.03% Amr::timeStep() 10 0.0001264 0.0001908 0.0004934 0.01% Castro::reset_internal_energy(MultiFab) 63 0.00026 0.0002713 0.0002823 0.01% Castro::do_advance_ctu() 10 0.000132 0.0001671 0.0001935 0.01% Castro::do_old_sources() 10 6.783e-05 9.776e-05 0.0001789 0.01% Castro::clean_state() 62 0.0001357 0.0001522 0.0001654 0.00% StateDataPhysBCFunct::() 41 0.0001013 0.0001171 0.00014 0.00% FillPatchIterator::FillFromLevel0() 41 8.869e-05 0.0001026 0.000134 0.00% FabArray::ParallelCopy() 41 8.06e-05 9.447e-05 0.0001106 0.00% Amr::FinalizeInit() 1 3.875e-06 1.583e-05 9.587e-05 0.00% Castro::Castro() 1 4.851e-05 6.868e-05 8.908e-05 0.00% Castro::construct_old_source() 50 4.222e-05 6.734e-05 8.722e-05 0.00% FillPatchSingleLevel 41 6.024e-05 6.851e-05 7.782e-05 0.00% Castro::apply_source_to_state() 20 3.978e-05 5.276e-05 7.241e-05 0.00% Castro::do_new_sources() 10 5.137e-05 5.888e-05 6.522e-05 0.00% Castro::subcycle_advance_ctu() 10 4.397e-05 5.249e-05 6.295e-05 0.00% Amr::defBaseLevel() 1 3.527e-05 4.744e-05 5.977e-05 0.00% Castro::advance() 10 3.589e-05 4.3e-05 5.016e-05 0.00% Castro::construct_old_gravity() 10 3.589e-05 4.179e-05 4.709e-05 0.00% Castro::construct_new_gravity() 10 3.22e-05 3.569e-05 4.405e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.328e-05 1.945e-05 3.108e-05 0.00% Castro::check_for_nan() 20 2.352e-05 2.476e-05 2.782e-05 0.00% Castro::expand_state() 10 2.101e-05 2.394e-05 2.767e-05 0.00% Castro::post_init() 1 8.509e-06 1.155e-05 2.6e-05 0.00% Castro::post_timestep() 10 1.506e-05 1.752e-05 2.328e-05 0.00% Castro::computeNewDt() 9 8.815e-06 9.531e-06 1.099e-05 0.00% Castro::computeInitialDt() 2 5.53e-06 6.533e-06 8.251e-06 0.00% Amr::InitializeInit() 1 2.619e-06 3.76e-06 6.025e-06 0.00% Amr::init() 1 1.594e-06 2.23e-06 2.757e-06 0.00% Amr::initialInit() 1 1.45e-06 1.756e-06 2.315e-06 0.00% Other 260 0.01077 0.01525 0.01951 0.59% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.326 3.329 3.332 100.00% Amr::coarseTimeStep() 10 3.128 3.128 3.128 93.89% Amr::timeStep() 10 3.113 3.114 3.116 93.52% Castro::advance() 10 3.099 3.099 3.099 93.03% Castro::subcycle_advance_ctu() 10 3.026 3.03 3.044 91.36% Castro::do_advance_ctu() 10 3.026 3.03 3.044 91.36% Castro::construct_ctu_hydro_source() 10 2.282 2.287 2.291 68.76% Gravity::make_radial_gravity() 21 0.2959 0.3043 0.3198 9.60% AmrLevel::FillPatch() 41 0.2082 0.2245 0.247 7.41% FillPatchIterator::Initialize 41 0.1732 0.1901 0.2189 6.57% Gravity::get_new_grav_vector() 11 0.2022 0.2053 0.2069 6.21% Castro::construct_old_gravity() 10 0.1784 0.1859 0.1976 5.93% Gravity::get_old_grav_vector() 10 0.1776 0.1852 0.197 5.91% Amr::init() 1 0.1863 0.1886 0.1912 5.74% Castro::construct_new_gravity() 10 0.1806 0.1833 0.1844 5.53% FillPatchIterator::FillFromLevel0() 41 0.1196 0.1439 0.1833 5.50% FillPatchSingleLevel 41 0.1195 0.1437 0.1832 5.50% Amr::initialInit() 1 0.1722 0.1744 0.1771 5.31% check_for_negative_density() 10 0.0382 0.1106 0.1759 5.28% Castro::initialize_do_advance() 10 0.1575 0.1629 0.1664 5.00% FabArray::ParallelCopy() 41 0.08352 0.1101 0.1518 4.56% Amr::InitializeInit() 1 0.05784 0.09982 0.1463 4.39% Amr::defBaseLevel() 1 0.05784 0.09982 0.1463 4.39% Castro::estTimeStep() 21 0.02514 0.08032 0.1246 3.74% Castro::initData() 1 0.03857 0.07855 0.1235 3.71% Castro::expand_state() 10 0.1055 0.1125 0.1207 3.62% Castro::do_old_sources() 10 0.1019 0.1124 0.1189 3.57% Amr::FinalizeInit() 1 0.02596 0.07456 0.1189 3.57% Castro::clean_state() 62 0.1027 0.1071 0.1187 3.56% FabArray::ParallelCopy_finish() 41 0.04241 0.07058 0.1183 3.55% amrex::Copy() 193 0.06701 0.08256 0.09608 2.88% Castro::computeInitialDt() 2 0.002531 0.05121 0.09562 2.87% FabArray::setVal() 143 0.0512 0.06424 0.07115 2.14% Castro::initialize_advance() 10 0.05147 0.06592 0.06966 2.09% Castro::computeTemp() 63 0.06361 0.06486 0.06666 2.00% Castro::do_new_sources() 10 0.05427 0.06018 0.06623 1.99% Castro::normalize_species() 62 0.03356 0.03657 0.04793 1.44% Castro::reset_internal_energy(MultiFab) 63 0.04553 0.04636 0.04785 1.44% Castro::reset_internal_energy(Fab) 1008 0.04525 0.04609 0.04758 1.43% FabArray::ParallelCopy_nowait() 41 0.03344 0.03941 0.04214 1.26% StateDataPhysBCFunct::() 41 0.03129 0.0336 0.03593 1.08% StateData::FillBoundary(geom) 41 0.03116 0.03348 0.03582 1.08% Castro::construct_new_source() 50 0.0266 0.02854 0.03125 0.94% Gravity::interpolate_monopole_grav() 21 0.02498 0.02579 0.02981 0.89% Castro::finalize_do_advance() 10 0.01361 0.01991 0.0259 0.78% Castro::construct_new_gravity_source() 10 0.02106 0.02249 0.02501 0.75% Castro::post_init() 1 0.02263 0.02319 0.02339 0.70% Amr::writePlotFile() 2 0.02167 0.02182 0.02232 0.67% Castro::apply_source_to_state() 20 0.01027 0.013 0.01874 0.56% FabArray::Saxpy() 20 0.01023 0.01295 0.01866 0.56% Castro::post_timestep() 10 0.0138 0.01449 0.01627 0.49% FabArray::setDomainBndry() 41 0.008324 0.01261 0.01527 0.46% Castro::Castro() 1 0.009218 0.01201 0.01463 0.44% VisMF::Write(FabArray) 2 0.008849 0.009571 0.01193 0.36% Castro::check_for_nan() 20 0.009535 0.01007 0.0111 0.33% MultiFab::contains_nan() 20 0.00951 0.01004 0.01107 0.33% Castro::construct_old_source() 50 0.006466 0.009127 0.01092 0.33% Castro::construct_old_gravity_source() 10 0.006423 0.00906 0.01085 0.33% Castro::computeNewDt() 9 0.01017 0.0103 0.01062 0.32% Castro::initMFs() 1 0.006213 0.008289 0.01038 0.31% AmrLevel::AmrLevel(dm) 1 0.005224 0.006869 0.008477 0.25% StateData::define() 4 0.005211 0.006849 0.008455 0.25% Other 260 0.01505 0.02231 0.02965 0.89% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 2 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8634 KiB 8638 KiB 8645 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6705 KiB 6713 KiB 6716 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7109 KiB 7118 KiB 7120 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4526 KiB 4536 KiB 4557 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 231 KiB 245 KiB 270 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 16 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2781 KiB 2785 KiB 2786 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 225 KiB 232 KiB 244 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 47 KiB 66 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2022 KiB 2023 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 77 KiB 79 KiB 79 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 71 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.02-3-gfc7d9e75fc28) finalized