Initializing AMReX (26.02-6-g4e677e1063a8)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.02-6-g4e677e1063a8) initialized Starting run at 06:35:07 UTC on 2026-02-05. Successfully read inputs file ... Castro git describe: 26.02 AMReX git describe: 26.02-6-g4e677e106 Microphysics git describe: 26.02-1-g64af4cfc reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014839133 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.334208933 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.330825734 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.307812657 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.306068798 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.356693172 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.298971722 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.287701289 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.287697706 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.288148166 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.287956995 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007802029 seconds Ending run at 06:35:10 UTC on 2026-02-05. Run time = 3.264490918 Run time without initialization = 3.099181653 Average number of zones advanced per microsecond: 0.846 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.2630 ... 3.2636 ... 3.2646 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1299 2.1724 2.2357 68.48% Gravity::make_radial_gravity() 21 0.2828 0.2918 0.3078 9.43% check_for_negative_density() 10 0.01441 0.08078 0.12 3.68% Castro::estTimeStep() 21 0.02669 0.06305 0.1037 3.18% Castro::initData() 1 0.0344 0.07124 0.1008 3.09% FabArray::ParallelCopy_finish() 41 0.0385 0.0479 0.08725 2.67% amrex::Copy() 193 0.06366 0.07853 0.08707 2.67% FabArray::setVal() 143 0.05673 0.06609 0.07158 2.19% Castro::reset_internal_energy(Fab) 1008 0.0433 0.04571 0.04766 1.46% FabArray::ParallelCopy_nowait() 41 0.0354 0.03979 0.0411 1.26% Castro::normalize_species() 62 0.03348 0.03435 0.03654 1.12% StateData::FillBoundary(geom) 41 0.03181 0.03316 0.03532 1.08% FillPatchIterator::Initialize 41 0.02752 0.03204 0.03426 1.05% Gravity::interpolate_monopole_grav() 21 0.02473 0.02519 0.02597 0.80% Castro::construct_new_gravity_source() 10 0.02208 0.02318 0.02492 0.76% Castro::computeTemp() 63 0.01758 0.01836 0.01904 0.58% Castro::initialize_do_advance() 10 0.01184 0.01657 0.01808 0.55% FabArray::setDomainBndry() 41 0.008561 0.01162 0.01493 0.46% Castro::initialize_advance() 10 0.005241 0.01075 0.01398 0.43% FabArray::Saxpy() 20 0.0103 0.01263 0.01398 0.43% Amr::writePlotFile() 2 0.007477 0.01063 0.01311 0.40% VisMF::Write(FabArray) 2 0.008714 0.009873 0.01257 0.39% MultiFab::contains_nan() 20 0.009268 0.01003 0.0111 0.34% Castro::construct_old_gravity_source() 10 0.006934 0.009463 0.009992 0.31% Castro::initMFs() 1 0.006637 0.007205 0.008369 0.26% Castro::enforce_min_density() 62 0.005888 0.006385 0.00671 0.21% Castro::construct_new_source() 50 0.005643 0.006059 0.006355 0.19% main() 1 0.003999 0.004269 0.004654 0.14% Gravity::get_new_grav_vector() 11 0.002769 0.003453 0.003843 0.12% Amr::coarseTimeStep() 10 0.001377 0.001987 0.003002 0.09% Gravity::get_old_grav_vector() 10 0.001548 0.002059 0.002446 0.07% Castro::finalize_do_advance() 10 0.0006164 0.001218 0.001652 0.05% AmrLevel::FillPatch() 41 0.0008537 0.001202 0.00137 0.04% Amr::timeStep() 10 0.0001312 0.0001868 0.0004725 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002597 0.0002761 0.0002987 0.01% Castro::do_advance_ctu() 10 0.0001345 0.0001495 0.0001771 0.01% Castro::clean_state() 62 0.000131 0.0001491 0.0001539 0.00% StateDataPhysBCFunct::() 41 9.594e-05 0.0001087 0.0001279 0.00% FillPatchIterator::FillFromLevel0() 41 9.049e-05 9.957e-05 0.0001111 0.00% Castro::do_old_sources() 10 7.149e-05 8.589e-05 0.0001097 0.00% FabArray::ParallelCopy() 41 7.935e-05 9.099e-05 0.0001022 0.00% Amr::FinalizeInit() 1 3.625e-06 1.598e-05 9.858e-05 0.00% FillPatchSingleLevel 41 6.402e-05 6.894e-05 8.179e-05 0.00% Castro::Castro() 1 5.48e-05 6.959e-05 7.946e-05 0.00% Castro::construct_old_source() 50 5.075e-05 6.708e-05 7.928e-05 0.00% Castro::do_new_sources() 10 4.674e-05 5.672e-05 6.853e-05 0.00% Castro::subcycle_advance_ctu() 10 4.101e-05 5.135e-05 6.52e-05 0.00% Castro::construct_old_gravity() 10 3.537e-05 4.141e-05 5.729e-05 0.00% Amr::defBaseLevel() 1 3.597e-05 4.746e-05 5.413e-05 0.00% Castro::apply_source_to_state() 20 4.387e-05 4.977e-05 5.389e-05 0.00% Castro::advance() 10 3.367e-05 4.223e-05 5.214e-05 0.00% Castro::construct_new_gravity() 10 3.073e-05 3.424e-05 3.777e-05 0.00% Castro::expand_state() 10 1.823e-05 2.385e-05 3.594e-05 0.00% Castro::check_for_nan() 20 2.213e-05 2.455e-05 2.891e-05 0.00% Castro::post_timestep() 10 1.463e-05 1.653e-05 1.892e-05 0.00% Castro::post_init() 1 8.236e-06 9.123e-06 1.095e-05 0.00% Castro::computeNewDt() 9 8.2e-06 9.414e-06 1.042e-05 0.00% Castro::computeInitialDt() 2 5.615e-06 6.466e-06 7.799e-06 0.00% Amr::InitializeInit() 1 2.548e-06 3.329e-06 6.061e-06 0.00% Amr::init() 1 1.783e-06 2.269e-06 3.252e-06 0.00% Amr::initialInit() 1 1.439e-06 1.887e-06 2.545e-06 0.00% Other 203 0.01032 0.01288 0.01539 0.47% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.263 3.264 3.265 100.00% Amr::coarseTimeStep() 10 3.087 3.087 3.087 94.56% Amr::timeStep() 10 3.072 3.073 3.074 94.16% Castro::advance() 10 3.059 3.059 3.06 93.72% Castro::subcycle_advance_ctu() 10 2.985 2.989 3.003 91.99% Castro::do_advance_ctu() 10 2.985 2.989 3.003 91.99% Castro::construct_ctu_hydro_source() 10 2.269 2.272 2.274 69.67% Gravity::make_radial_gravity() 21 0.2996 0.3081 0.321 9.83% AmrLevel::FillPatch() 41 0.1848 0.1975 0.2161 6.62% Gravity::get_new_grav_vector() 11 0.2045 0.2058 0.2072 6.35% Castro::construct_old_gravity() 10 0.1769 0.1824 0.1933 5.92% Gravity::get_old_grav_vector() 10 0.1761 0.1817 0.1926 5.90% FillPatchIterator::Initialize 41 0.1534 0.165 0.191 5.85% Castro::construct_new_gravity() 10 0.1831 0.1837 0.1845 5.65% Amr::init() 1 0.1637 0.1644 0.165 5.05% Castro::initialize_do_advance() 10 0.1557 0.1608 0.1644 5.04% FillPatchIterator::FillFromLevel0() 41 0.1119 0.1213 0.1549 4.74% FillPatchSingleLevel 41 0.1118 0.1212 0.1548 4.74% Amr::initialInit() 1 0.1485 0.1492 0.1498 4.59% FabArray::ParallelCopy() 41 0.07884 0.08788 0.1228 3.76% Amr::InitializeInit() 1 0.05526 0.09249 0.1226 3.76% Amr::defBaseLevel() 1 0.05525 0.09249 0.1226 3.76% Castro::expand_state() 10 0.1048 0.1105 0.1211 3.71% check_for_negative_density() 10 0.01441 0.08078 0.12 3.68% Castro::clean_state() 62 0.09995 0.1044 0.1085 3.32% Castro::initData() 1 0.03806 0.07478 0.1042 3.19% Castro::estTimeStep() 21 0.02669 0.06305 0.1037 3.18% Castro::do_old_sources() 10 0.08843 0.09223 0.09649 2.96% Amr::FinalizeInit() 1 0.02587 0.05671 0.09457 2.90% FabArray::ParallelCopy_finish() 41 0.0385 0.0479 0.08725 2.67% amrex::Copy() 193 0.06366 0.07853 0.08707 2.67% Castro::initialize_advance() 10 0.05205 0.06677 0.07172 2.20% FabArray::setVal() 143 0.05673 0.06609 0.07158 2.19% Castro::computeInitialDt() 2 0.002469 0.03325 0.07096 2.17% Castro::computeTemp() 63 0.06114 0.06434 0.06661 2.04% Castro::do_new_sources() 10 0.05774 0.0611 0.0666 2.04% Castro::reset_internal_energy(MultiFab) 63 0.04356 0.04599 0.04793 1.47% Castro::reset_internal_energy(Fab) 1008 0.0433 0.04571 0.04766 1.46% FabArray::ParallelCopy_nowait() 41 0.03551 0.03988 0.04119 1.26% Castro::normalize_species() 62 0.03348 0.03435 0.03654 1.12% StateDataPhysBCFunct::() 41 0.03191 0.03327 0.03542 1.08% StateData::FillBoundary(geom) 41 0.03181 0.03316 0.03532 1.08% Castro::construct_new_source() 50 0.02786 0.02924 0.03126 0.96% Gravity::interpolate_monopole_grav() 21 0.02473 0.02519 0.02597 0.80% Castro::finalize_do_advance() 10 0.01535 0.02089 0.02504 0.77% Castro::construct_new_gravity_source() 10 0.02208 0.02318 0.02492 0.76% Castro::post_init() 1 0.02307 0.02331 0.02358 0.72% Amr::writePlotFile() 2 0.02275 0.02306 0.0235 0.72% FabArray::setDomainBndry() 41 0.008561 0.01162 0.01493 0.46% Castro::post_timestep() 10 0.01375 0.01415 0.01449 0.44% Castro::apply_source_to_state() 20 0.01034 0.01268 0.01403 0.43% FabArray::Saxpy() 20 0.0103 0.01263 0.01398 0.43% VisMF::Write(FabArray) 2 0.008714 0.009873 0.01257 0.39% Castro::Castro() 1 0.01037 0.01104 0.01211 0.37% Castro::check_for_nan() 20 0.009292 0.01005 0.01112 0.34% MultiFab::contains_nan() 20 0.009268 0.01003 0.0111 0.34% Castro::computeNewDt() 9 0.01014 0.01015 0.01017 0.31% Castro::construct_old_source() 50 0.006985 0.00953 0.01007 0.31% Castro::construct_old_gravity_source() 10 0.006934 0.009463 0.009992 0.31% Castro::initMFs() 1 0.006637 0.007205 0.008369 0.26% Castro::enforce_min_density() 62 0.005888 0.006385 0.00671 0.21% Other 203 0.02016 0.02407 0.02793 0.86% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 15 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8640 KiB 8649 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6754 KiB 6761 KiB 6765 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7117 KiB 7125 KiB 7126 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4558 KiB 4565 KiB 4589 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 213 KiB 227 KiB 250 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2802 KiB 2805 KiB 2806 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 233 KiB 240 KiB 250 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 41 KiB 58 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 80 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 71 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.02-6-g4e677e1063a8) finalized