Initializing AMReX (26.02-8-gd0f0aeabbbe5)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.02-8-gd0f0aeabbbe5) initialized Starting run at 06:35:23 UTC on 2026-02-06. Successfully read inputs file ... Castro git describe: 26.02-1-gc94004734 AMReX git describe: 26.02-8-gd0f0aeabb Microphysics git describe: 26.02-1-g64af4cfc reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015836835 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.338288528 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.340972868 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.319051333 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.328389761 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.361621007 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.294554545 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.291941108 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.288370107 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.288265932 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.287656433 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007580473 seconds Ending run at 06:35:26 UTC on 2026-02-06. Run time = 3.345530092 Run time without initialization = 3.152569063 Average number of zones advanced per microsecond: 0.832 Average number of zones advanced per microsecond per rank: 0.104 TinyProfiler total time across processes [min...avg...max]: 3.3395 ... 3.3439 ... 3.3460 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0878 2.1589 2.2138 66.16% Gravity::make_radial_gravity() 21 0.3002 0.3181 0.3389 10.13% check_for_negative_density() 10 0.04232 0.09948 0.1751 5.23% Castro::estTimeStep() 21 0.03793 0.08034 0.1216 3.64% Castro::initData() 1 0.03444 0.07306 0.1177 3.52% FabArray::ParallelCopy_finish() 41 0.04033 0.06754 0.1062 3.18% amrex::Copy() 193 0.06473 0.08025 0.09195 2.75% FabArray::setVal() 143 0.05732 0.06641 0.07374 2.20% Castro::reset_internal_energy(Fab) 1008 0.04343 0.04587 0.04825 1.44% FabArray::ParallelCopy_nowait() 41 0.03313 0.04001 0.04356 1.30% FillPatchIterator::Initialize 41 0.02789 0.03419 0.03841 1.15% StateData::FillBoundary(geom) 41 0.02975 0.03383 0.03645 1.09% Castro::normalize_species() 62 0.03371 0.03465 0.03557 1.06% Castro::initialize_do_advance() 10 0.01119 0.01906 0.02801 0.84% Gravity::interpolate_monopole_grav() 21 0.02489 0.02545 0.02598 0.78% Castro::construct_new_gravity_source() 10 0.01989 0.02197 0.023 0.69% Castro::computeTemp() 63 0.01754 0.01845 0.01919 0.57% FabArray::setDomainBndry() 41 0.008248 0.01222 0.01426 0.43% Castro::initialize_advance() 10 0.005295 0.0106 0.01379 0.41% MultiFab::contains_nan() 20 0.009249 0.01031 0.01343 0.40% FabArray::Saxpy() 20 0.01021 0.01199 0.01313 0.39% Amr::writePlotFile() 2 0.00775 0.01102 0.01304 0.39% VisMF::Write(FabArray) 2 0.008687 0.009912 0.01301 0.39% Castro::initMFs() 1 0.006482 0.007702 0.0104 0.31% Castro::construct_old_gravity_source() 10 0.006168 0.008447 0.009425 0.28% StateData::define() 4 0.005373 0.006355 0.008556 0.26% Castro::construct_new_source() 50 0.005351 0.006065 0.00627 0.19% main() 1 0.003388 0.004633 0.005345 0.16% Gravity::get_new_grav_vector() 11 0.00285 0.003578 0.004085 0.12% Gravity::get_old_grav_vector() 10 0.001542 0.002005 0.002475 0.07% Amr::coarseTimeStep() 10 0.0009406 0.001599 0.002391 0.07% Castro::finalize_do_advance() 10 0.0006323 0.001119 0.001285 0.04% AmrLevel::FillPatch() 41 0.00083 0.001005 0.00116 0.03% Amr::timeStep() 10 0.0001383 0.0001906 0.0005029 0.02% Castro::reset_internal_energy(MultiFab) 63 0.0002532 0.0002679 0.0002833 0.01% Castro::do_advance_ctu() 10 0.0001522 0.0001673 0.0001957 0.01% StateDataPhysBCFunct::() 41 8.934e-05 0.000122 0.000172 0.01% Castro::clean_state() 62 0.0001355 0.0001538 0.0001658 0.00% FabArray::ParallelCopy() 41 8.742e-05 9.751e-05 0.0001185 0.00% FillPatchIterator::FillFromLevel0() 41 9.867e-05 0.0001047 0.0001181 0.00% Castro::do_old_sources() 10 6.82e-05 8.383e-05 9.095e-05 0.00% Castro::Castro() 1 6.265e-05 7.435e-05 8.931e-05 0.00% FillPatchSingleLevel 41 6.177e-05 7.115e-05 8.314e-05 0.00% Amr::FinalizeInit() 1 3.697e-06 1.359e-05 7.898e-05 0.00% Castro::construct_old_source() 50 5.139e-05 6.494e-05 7.377e-05 0.00% Castro::do_new_sources() 10 4.446e-05 5.646e-05 6.64e-05 0.00% Castro::construct_old_gravity() 10 3.686e-05 4.829e-05 6.117e-05 0.00% Castro::expand_state() 10 1.825e-05 3.323e-05 5.887e-05 0.00% Castro::apply_source_to_state() 20 4.28e-05 4.842e-05 5.86e-05 0.00% Castro::subcycle_advance_ctu() 10 4.507e-05 5.269e-05 5.824e-05 0.00% Amr::defBaseLevel() 1 3.735e-05 4.361e-05 5.569e-05 0.00% Castro::advance() 10 3.717e-05 4.388e-05 5.39e-05 0.00% Castro::construct_new_gravity() 10 3.098e-05 3.769e-05 4.675e-05 0.00% Castro::check_for_nan() 20 2.319e-05 2.496e-05 2.828e-05 0.00% Castro::post_init() 1 8.002e-06 1.257e-05 2.527e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.288e-05 1.612e-05 2.269e-05 0.00% Castro::post_timestep() 10 1.472e-05 1.679e-05 1.877e-05 0.00% Castro::computeNewDt() 9 8.687e-06 9.693e-06 1.113e-05 0.00% Castro::computeInitialDt() 2 5.776e-06 6.674e-06 7.323e-06 0.00% Amr::InitializeInit() 1 2.527e-06 3.343e-06 4.901e-06 0.00% Amr::init() 1 1.933e-06 2.272e-06 2.778e-06 0.00% Amr::initialInit() 1 1.675e-06 1.952e-06 2.294e-06 0.00% Other 260 0.01067 0.01592 0.01949 0.58% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.34 3.344 3.346 100.00% Amr::coarseTimeStep() 10 3.14 3.14 3.14 93.83% Amr::timeStep() 10 3.125 3.126 3.127 93.45% Castro::advance() 10 3.111 3.112 3.112 93.01% Castro::subcycle_advance_ctu() 10 3.037 3.043 3.056 91.34% Castro::do_advance_ctu() 10 3.037 3.043 3.056 91.34% Castro::construct_ctu_hydro_source() 10 2.275 2.278 2.282 68.19% Gravity::make_radial_gravity() 21 0.317 0.3341 0.3513 10.50% AmrLevel::FillPatch() 41 0.21 0.2219 0.2287 6.84% Castro::construct_old_gravity() 10 0.1886 0.2041 0.219 6.55% Gravity::get_old_grav_vector() 10 0.1876 0.2033 0.2184 6.53% Gravity::get_new_grav_vector() 11 0.2117 0.2128 0.2137 6.39% FillPatchIterator::Initialize 41 0.1735 0.1883 0.2057 6.15% Castro::initialize_do_advance() 10 0.1786 0.1832 0.1933 5.78% Amr::init() 1 0.1885 0.1916 0.193 5.77% Castro::construct_new_gravity() 10 0.1867 0.1877 0.1886 5.64% Amr::initialInit() 1 0.1726 0.1758 0.1774 5.30% check_for_negative_density() 10 0.04232 0.09948 0.1751 5.23% FillPatchIterator::FillFromLevel0() 41 0.1208 0.1419 0.1696 5.07% FillPatchSingleLevel 41 0.1207 0.1417 0.1695 5.06% Amr::InitializeInit() 1 0.05849 0.09764 0.1441 4.31% Amr::defBaseLevel() 1 0.05849 0.09763 0.1441 4.31% FabArray::ParallelCopy() 41 0.08408 0.1077 0.1396 4.17% Castro::expand_state() 10 0.1215 0.1302 0.1393 4.16% Castro::estTimeStep() 21 0.03793 0.08034 0.1216 3.64% Castro::initData() 1 0.038 0.07659 0.121 3.62% Amr::FinalizeInit() 1 0.02855 0.07817 0.1189 3.55% Castro::clean_state() 62 0.1012 0.1049 0.109 3.26% FabArray::ParallelCopy_finish() 41 0.04033 0.06754 0.1062 3.18% Castro::do_old_sources() 10 0.09174 0.09568 0.09934 2.97% Castro::computeInitialDt() 2 0.002512 0.05204 0.09253 2.77% amrex::Copy() 193 0.06473 0.08025 0.09195 2.75% FabArray::setVal() 143 0.05732 0.06641 0.07374 2.20% Castro::initialize_advance() 10 0.05172 0.0659 0.07143 2.13% Castro::computeTemp() 63 0.06124 0.06459 0.06772 2.02% Castro::do_new_sources() 10 0.05312 0.05926 0.0632 1.89% Castro::reset_internal_energy(MultiFab) 63 0.0437 0.04613 0.04853 1.45% Castro::reset_internal_energy(Fab) 1008 0.04343 0.04587 0.04825 1.44% FabArray::ParallelCopy_nowait() 41 0.03323 0.0401 0.04365 1.30% StateDataPhysBCFunct::() 41 0.02984 0.03395 0.03657 1.09% StateData::FillBoundary(geom) 41 0.02975 0.03383 0.03645 1.09% Castro::normalize_species() 62 0.03371 0.03465 0.03557 1.06% Castro::construct_new_source() 50 0.02524 0.02803 0.02914 0.87% Castro::post_init() 1 0.02583 0.02608 0.02629 0.79% Gravity::interpolate_monopole_grav() 21 0.02489 0.02545 0.02598 0.78% Castro::finalize_do_advance() 10 0.0143 0.01897 0.0256 0.77% Amr::writePlotFile() 2 0.02314 0.0235 0.02368 0.71% Castro::construct_new_gravity_source() 10 0.01989 0.02197 0.023 0.69% Castro::post_timestep() 10 0.01397 0.01426 0.01474 0.44% Castro::Castro() 1 0.01012 0.01145 0.01443 0.43% FabArray::setDomainBndry() 41 0.008248 0.01222 0.01426 0.43% Castro::check_for_nan() 20 0.009272 0.01034 0.01345 0.40% MultiFab::contains_nan() 20 0.009249 0.01031 0.01343 0.40% Castro::apply_source_to_state() 20 0.01026 0.01204 0.01318 0.39% FabArray::Saxpy() 20 0.01021 0.01199 0.01313 0.39% VisMF::Write(FabArray) 2 0.008687 0.009912 0.01301 0.39% Castro::computeNewDt() 9 0.01045 0.01046 0.01048 0.31% Castro::initMFs() 1 0.006482 0.007702 0.0104 0.31% Castro::construct_old_source() 50 0.006219 0.008512 0.009499 0.28% Castro::construct_old_gravity_source() 10 0.006168 0.008447 0.009425 0.28% AmrLevel::AmrLevel(dm) 1 0.005387 0.006371 0.008578 0.26% StateData::define() 4 0.005373 0.006355 0.008556 0.26% Other 260 0.01495 0.02372 0.02916 0.87% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8632 KiB 8639 KiB 8643 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6702 KiB 6709 KiB 6714 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7110 KiB 7117 KiB 7120 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4526 KiB 4535 KiB 4558 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 239 KiB 254 KiB 266 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2781 KiB 2784 KiB 2785 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 241 KiB 254 KiB 267 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 38 KiB 51 KiB 69 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2020 KiB 2022 KiB 2023 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 81 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 71 KiB 77 KiB 83 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.02-8-gd0f0aeabbbe5) finalized