Initializing AMReX (26.02-12-gd7da50458966)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.02-12-gd7da50458966) initialized Starting run at 06:35:37 UTC on 2026-02-09. Successfully read inputs file ... Castro git describe: 26.02-3-gcfb253602 AMReX git describe: 26.02-12-gd7da50458 Microphysics git describe: 26.02-1-g64af4cfc reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015881654 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.328514299 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.329081189 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.311028803 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.316094008 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.363381062 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.299796293 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.287686561 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.286985949 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.287041263 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.288195854 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.00750914 seconds Ending run at 06:35:41 UTC on 2026-02-09. Run time = 3.279244936 Run time without initialization = 3.110705719 Average number of zones advanced per microsecond: 0.843 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.2750 ... 3.2779 ... 3.2793 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1175 2.1662 2.2348 68.15% Gravity::make_radial_gravity() 21 0.2823 0.2907 0.3056 9.32% check_for_negative_density() 10 0.009525 0.0809 0.1314 4.01% Castro::estTimeStep() 21 0.02599 0.05925 0.09988 3.05% Castro::initData() 1 0.03442 0.06921 0.09928 3.03% amrex::Copy() 193 0.07603 0.08265 0.09042 2.76% FabArray::setVal() 143 0.06714 0.07169 0.0768 2.34% FabArray::ParallelCopy_finish() 41 0.04129 0.05029 0.06468 1.97% Castro::reset_internal_energy(Fab) 1008 0.04277 0.04498 0.04706 1.44% FabArray::ParallelCopy_nowait() 41 0.03767 0.04132 0.04357 1.33% FillPatchIterator::Initialize 41 0.02951 0.03531 0.04291 1.31% StateData::FillBoundary(geom) 41 0.03022 0.03365 0.03548 1.08% Castro::normalize_species() 62 0.0334 0.03427 0.03526 1.08% Gravity::interpolate_monopole_grav() 21 0.02485 0.02515 0.0256 0.78% Castro::construct_new_gravity_source() 10 0.02172 0.02353 0.02539 0.77% Castro::computeTemp() 63 0.01705 0.01815 0.01901 0.58% Castro::initialize_do_advance() 10 0.0125 0.01709 0.01807 0.55% FabArray::setDomainBndry() 41 0.008874 0.0135 0.01659 0.51% Castro::initialize_advance() 10 0.01049 0.01268 0.01528 0.47% FabArray::Saxpy() 20 0.01238 0.01362 0.01433 0.44% VisMF::Write(FabArray) 2 0.009227 0.009806 0.01276 0.39% Amr::writePlotFile() 2 0.008025 0.01124 0.01221 0.37% MultiFab::contains_nan() 20 0.009296 0.01029 0.01173 0.36% Castro::initMFs() 1 0.006409 0.007579 0.01104 0.34% Castro::construct_old_gravity_source() 10 0.008429 0.01027 0.01085 0.33% StateData::define() 4 0.005306 0.006121 0.008384 0.26% Castro::construct_new_source() 50 0.006068 0.006277 0.006489 0.20% main() 1 0.004021 0.004334 0.004847 0.15% Gravity::get_new_grav_vector() 11 0.002794 0.003592 0.004256 0.13% Gravity::get_old_grav_vector() 10 0.001491 0.002147 0.002692 0.08% Amr::coarseTimeStep() 10 0.0008567 0.001575 0.002328 0.07% AmrLevel::FillPatch() 41 0.001105 0.00126 0.001708 0.05% Castro::finalize_do_advance() 10 0.001279 0.001322 0.001418 0.04% Amr::timeStep() 10 0.0001471 0.0001857 0.0003703 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002553 0.0002711 0.0002833 0.01% Castro::do_advance_ctu() 10 0.0001422 0.0001605 0.0001744 0.01% Castro::clean_state() 62 0.0001361 0.000151 0.00017 0.01% StateDataPhysBCFunct::() 41 0.0001008 0.000108 0.0001159 0.00% Castro::do_old_sources() 10 8.073e-05 9.534e-05 0.0001143 0.00% FillPatchIterator::FillFromLevel0() 41 9.689e-05 0.0001034 0.0001109 0.00% FabArray::ParallelCopy() 41 8.609e-05 9.645e-05 0.0001101 0.00% Castro::Castro() 1 5.516e-05 7.739e-05 0.000107 0.00% FillPatchSingleLevel 41 6.689e-05 7.46e-05 9.44e-05 0.00% Amr::FinalizeInit() 1 3.914e-06 1.538e-05 8.795e-05 0.00% Castro::construct_old_source() 50 5.728e-05 7.154e-05 8.321e-05 0.00% Castro::do_new_sources() 10 5.829e-05 6.301e-05 7.128e-05 0.00% Amr::initialInit() 1 1.402e-06 1.002e-05 6.684e-05 0.00% Castro::subcycle_advance_ctu() 10 4.34e-05 5.299e-05 6.615e-05 0.00% Amr::defBaseLevel() 1 3.855e-05 4.868e-05 6.431e-05 0.00% Castro::apply_source_to_state() 20 5.145e-05 5.451e-05 6.265e-05 0.00% Castro::construct_old_gravity() 10 3.782e-05 4.382e-05 5.201e-05 0.00% Castro::advance() 10 4.099e-05 4.534e-05 5.049e-05 0.00% Castro::construct_new_gravity() 10 3.333e-05 3.876e-05 4.567e-05 0.00% Castro::check_for_nan() 20 2.338e-05 2.603e-05 2.937e-05 0.00% Castro::expand_state() 10 2.049e-05 2.367e-05 2.849e-05 0.00% Castro::post_timestep() 10 1.685e-05 1.874e-05 2.494e-05 0.00% AmrLevel::AmrLevel(dm) 1 1.155e-05 1.634e-05 2.287e-05 0.00% Amr::InitializeInit() 1 2.583e-06 5.332e-06 1.143e-05 0.00% Castro::post_init() 1 8.523e-06 9.675e-06 1.143e-05 0.00% Castro::computeNewDt() 9 8.744e-06 9.475e-06 1.07e-05 0.00% Castro::computeInitialDt() 2 5.961e-06 7.106e-06 8.686e-06 0.00% Amr::init() 1 1.794e-06 2.73e-06 6.918e-06 0.00% Other 260 0.01148 0.01608 0.01881 0.57% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.275 3.278 3.279 100.00% Amr::coarseTimeStep() 10 3.098 3.098 3.098 94.49% Amr::timeStep() 10 3.085 3.086 3.086 94.11% Castro::advance() 10 3.071 3.071 3.072 93.67% Castro::subcycle_advance_ctu() 10 2.992 2.996 2.998 91.43% Castro::do_advance_ctu() 10 2.992 2.996 2.998 91.43% Castro::construct_ctu_hydro_source() 10 2.263 2.266 2.269 69.20% Gravity::make_radial_gravity() 21 0.2988 0.3073 0.3207 9.78% AmrLevel::FillPatch() 41 0.1943 0.209 0.2204 6.72% Gravity::get_new_grav_vector() 11 0.206 0.2072 0.2081 6.35% Castro::construct_old_gravity() 10 0.1769 0.1818 0.193 5.89% Gravity::get_old_grav_vector() 10 0.1761 0.1811 0.1923 5.86% FillPatchIterator::Initialize 41 0.1648 0.1745 0.1835 5.60% Castro::construct_new_gravity() 10 0.1813 0.1823 0.1827 5.57% Castro::initialize_do_advance() 10 0.1511 0.164 0.1695 5.17% Amr::init() 1 0.1644 0.1672 0.1683 5.13% Amr::initialInit() 1 0.1482 0.1509 0.152 4.63% FillPatchIterator::FillFromLevel0() 41 0.1196 0.1257 0.133 4.06% FillPatchSingleLevel 41 0.1195 0.1256 0.1329 4.05% check_for_negative_density() 10 0.009525 0.0809 0.1314 4.01% Amr::InitializeInit() 1 0.05787 0.09348 0.1228 3.75% Amr::defBaseLevel() 1 0.05786 0.09347 0.1228 3.75% Castro::expand_state() 10 0.1048 0.1133 0.1191 3.63% Castro::clean_state() 62 0.1 0.1035 0.107 3.26% Castro::do_old_sources() 10 0.09903 0.1024 0.1062 3.24% Castro::initData() 1 0.03772 0.07277 0.103 3.14% FabArray::ParallelCopy() 41 0.08507 0.0918 0.1025 3.13% Castro::estTimeStep() 21 0.02599 0.05925 0.09988 3.05% Amr::FinalizeInit() 1 0.02907 0.0574 0.09389 2.86% amrex::Copy() 193 0.07603 0.08265 0.09042 2.76% FabArray::setVal() 143 0.06714 0.07169 0.0768 2.34% Castro::initialize_advance() 10 0.06957 0.07233 0.07612 2.32% Castro::computeInitialDt() 2 0.002758 0.03112 0.06775 2.07% Castro::do_new_sources() 10 0.05894 0.06297 0.06755 2.06% Castro::computeTemp() 63 0.06008 0.0634 0.06634 2.02% FabArray::ParallelCopy_finish() 41 0.04129 0.05029 0.06468 1.97% Castro::reset_internal_energy(MultiFab) 63 0.04303 0.04526 0.04735 1.44% Castro::reset_internal_energy(Fab) 1008 0.04277 0.04498 0.04706 1.44% FabArray::ParallelCopy_nowait() 41 0.03777 0.04141 0.04367 1.33% StateDataPhysBCFunct::() 41 0.03033 0.03375 0.03559 1.09% StateData::FillBoundary(geom) 41 0.03022 0.03365 0.03548 1.08% Castro::normalize_species() 62 0.0334 0.03427 0.03526 1.08% Castro::construct_new_source() 50 0.028 0.02981 0.03173 0.97% Castro::post_init() 1 0.02597 0.02625 0.0264 0.81% Gravity::interpolate_monopole_grav() 21 0.02485 0.02515 0.0256 0.78% Castro::construct_new_gravity_source() 10 0.02172 0.02353 0.02539 0.77% Amr::writePlotFile() 2 0.02365 0.02397 0.02433 0.74% Castro::finalize_do_advance() 10 0.01436 0.01954 0.02432 0.74% FabArray::setDomainBndry() 41 0.008874 0.0135 0.01659 0.51% Castro::Castro() 1 0.01028 0.01157 0.01503 0.46% Castro::post_timestep() 10 0.01342 0.01395 0.01457 0.44% Castro::apply_source_to_state() 20 0.01243 0.01368 0.01439 0.44% FabArray::Saxpy() 20 0.01238 0.01362 0.01433 0.44% VisMF::Write(FabArray) 2 0.009227 0.009806 0.01276 0.39% Castro::check_for_nan() 20 0.009322 0.01031 0.01176 0.36% MultiFab::contains_nan() 20 0.009296 0.01029 0.01173 0.36% Castro::initMFs() 1 0.006409 0.007579 0.01104 0.34% Castro::construct_old_source() 50 0.008486 0.01034 0.01093 0.33% Castro::construct_old_gravity_source() 10 0.008429 0.01027 0.01085 0.33% Castro::computeNewDt() 9 0.009911 0.009938 0.009957 0.30% AmrLevel::AmrLevel(dm) 1 0.005318 0.006137 0.008407 0.26% StateData::define() 4 0.005306 0.006121 0.008384 0.26% Other 260 0.01601 0.0238 0.02799 0.85% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 4 B 12 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8620 KiB 8639 KiB 8645 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6747 KiB 6752 KiB 6755 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7108 KiB 7117 KiB 7120 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4549 KiB 4554 KiB 4559 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 220 KiB 238 KiB 251 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 16 KiB 17 KiB 22 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2800 KiB 2803 KiB 2804 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 231 KiB 238 KiB 248 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 39 KiB 42 KiB 46 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2019 KiB 2022 KiB 2023 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 70 KiB 75 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.02-12-gd7da50458966) finalized