Initializing AMReX (26.02-19-g2e4b667c1bd9)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.02-19-g2e4b667c1bd9) initialized Starting run at 06:31:39 UTC on 2026-02-20. Successfully read inputs file ... Castro git describe: 26.02-3-gcfb253602 AMReX git describe: 26.02-19-g2e4b667c1 Microphysics git describe: 26.02-2-gf030dab7 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014425441 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.337278187 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.337662186 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.309915013 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.307781193 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.356458179 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.298289758 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.287635034 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.290476075 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.287987396 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.289217266 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007614698 seconds Ending run at 06:31:42 UTC on 2026-02-20. Run time = 3.279799422 Run time without initialization = 3.115233118 Average number of zones advanced per microsecond: 0.841 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.2787 ... 3.2793 ... 3.2798 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1459 2.1704 2.2284 67.94% Gravity::make_radial_gravity() 21 0.2793 0.2893 0.3049 9.30% check_for_negative_density() 10 0.04261 0.1058 0.135 4.12% Castro::initData() 1 0.03463 0.06964 0.09999 3.05% Castro::estTimeStep() 21 0.03305 0.06117 0.09892 3.02% amrex::Copy() 193 0.06304 0.07762 0.08673 2.64% FabArray::ParallelCopy_finish() 41 0.03557 0.04819 0.08321 2.54% FabArray::setVal() 143 0.05565 0.06666 0.07264 2.21% Castro::reset_internal_energy(Fab) 1008 0.04443 0.04563 0.0465 1.42% FabArray::ParallelCopy_nowait() 41 0.03445 0.03975 0.04175 1.27% StateData::FillBoundary(geom) 41 0.03022 0.03323 0.0373 1.14% Castro::normalize_species() 62 0.03343 0.03415 0.03572 1.09% FillPatchIterator::Initialize 41 0.02768 0.03204 0.03422 1.04% Gravity::interpolate_monopole_grav() 21 0.0248 0.0252 0.02554 0.78% Castro::construct_new_gravity_source() 10 0.02157 0.02281 0.02528 0.77% Castro::computeTemp() 63 0.01796 0.01835 0.01915 0.58% Castro::initialize_do_advance() 10 0.01169 0.01657 0.01779 0.54% FabArray::setDomainBndry() 41 0.008572 0.01198 0.01565 0.48% Castro::initialize_advance() 10 0.005404 0.01088 0.01421 0.43% FabArray::Saxpy() 20 0.0108 0.01265 0.01392 0.42% Amr::writePlotFile() 2 0.00724 0.01016 0.01219 0.37% VisMF::Write(FabArray) 2 0.008817 0.009611 0.01193 0.36% MultiFab::contains_nan() 20 0.009165 0.009877 0.01095 0.33% Castro::construct_old_gravity_source() 10 0.007007 0.009475 0.01012 0.31% Castro::initMFs() 1 0.006393 0.006822 0.008606 0.26% Castro::enforce_min_density() 62 0.006105 0.00641 0.006989 0.21% Castro::construct_new_source() 50 0.005504 0.006061 0.00627 0.19% main() 1 0.003674 0.004007 0.004267 0.13% Gravity::get_new_grav_vector() 11 0.003056 0.003558 0.003807 0.12% Amr::coarseTimeStep() 10 0.001177 0.002918 0.003565 0.11% Gravity::get_old_grav_vector() 10 0.001627 0.002025 0.002516 0.08% Castro::finalize_do_advance() 10 0.0005583 0.001242 0.002114 0.06% AmrLevel::FillPatch() 41 0.0007831 0.00102 0.00129 0.04% Amr::timeStep() 10 0.0001407 0.0001786 0.0003943 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002472 0.0002638 0.0003091 0.01% Castro::do_advance_ctu() 10 0.0001341 0.0001498 0.0001643 0.01% Castro::clean_state() 62 0.0001382 0.0001485 0.0001624 0.00% Castro::Castro() 1 4.741e-05 8.548e-05 0.0001163 0.00% StateDataPhysBCFunct::() 41 9.503e-05 0.0001009 0.0001055 0.00% FillPatchIterator::FillFromLevel0() 41 9.415e-05 9.815e-05 0.0001045 0.00% FabArray::ParallelCopy() 41 8.103e-05 8.716e-05 0.0001035 0.00% Castro::do_old_sources() 10 7.559e-05 8.755e-05 0.0001006 0.00% Amr::FinalizeInit() 1 4.053e-06 1.471e-05 8.602e-05 0.00% FillPatchSingleLevel 41 5.708e-05 6.642e-05 7.768e-05 0.00% Castro::construct_old_source() 50 6.154e-05 6.872e-05 7.709e-05 0.00% Castro::do_new_sources() 10 4.917e-05 5.755e-05 6.901e-05 0.00% Amr::defBaseLevel() 1 3.414e-05 4.455e-05 5.866e-05 0.00% Castro::subcycle_advance_ctu() 10 4.023e-05 4.836e-05 5.631e-05 0.00% Castro::apply_source_to_state() 20 4.161e-05 4.941e-05 5.362e-05 0.00% Castro::construct_old_gravity() 10 3.57e-05 3.94e-05 4.739e-05 0.00% Castro::advance() 10 3.784e-05 4.008e-05 4.204e-05 0.00% Castro::construct_new_gravity() 10 3.103e-05 3.492e-05 4.108e-05 0.00% Castro::check_for_nan() 20 2.191e-05 2.423e-05 2.854e-05 0.00% Castro::expand_state() 10 1.971e-05 2.202e-05 2.718e-05 0.00% Castro::post_timestep() 10 1.458e-05 1.743e-05 2.297e-05 0.00% Castro::post_init() 1 8.54e-06 1.054e-05 1.745e-05 0.00% Castro::computeNewDt() 9 8.466e-06 1.014e-05 1.243e-05 0.00% Castro::computeInitialDt() 2 5.749e-06 7.293e-06 8.347e-06 0.00% Amr::InitializeInit() 1 2.506e-06 4.434e-06 8.108e-06 0.00% Amr::init() 1 1.689e-06 2.186e-06 3.016e-06 0.00% Amr::initialInit() 1 1.418e-06 1.833e-06 2.262e-06 0.00% Other 203 0.01021 0.01232 0.01431 0.44% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.279 3.279 3.28 100.00% Amr::coarseTimeStep() 10 3.103 3.103 3.103 94.62% Amr::timeStep() 10 3.088 3.089 3.091 94.24% Castro::advance() 10 3.074 3.075 3.076 93.78% Castro::subcycle_advance_ctu() 10 3 3.005 3.018 92.03% Castro::do_advance_ctu() 10 3 3.005 3.018 92.02% Castro::construct_ctu_hydro_source() 10 2.29 2.295 2.3 70.12% Gravity::make_radial_gravity() 21 0.2951 0.3053 0.3177 9.69% AmrLevel::FillPatch() 41 0.18 0.1975 0.2096 6.39% Gravity::get_new_grav_vector() 11 0.2022 0.2044 0.2061 6.28% Castro::construct_old_gravity() 10 0.1733 0.1808 0.1911 5.83% Gravity::get_old_grav_vector() 10 0.1726 0.1801 0.1904 5.81% FillPatchIterator::Initialize 41 0.1496 0.1656 0.1849 5.64% Castro::construct_new_gravity() 10 0.1788 0.1798 0.181 5.52% Amr::init() 1 0.1634 0.1639 0.1642 5.01% Castro::initialize_do_advance() 10 0.1534 0.1599 0.1641 5.00% Amr::initialInit() 1 0.1487 0.1492 0.1496 4.56% FillPatchIterator::FillFromLevel0() 41 0.1101 0.1216 0.1486 4.53% FillPatchSingleLevel 41 0.11 0.1215 0.1485 4.53% check_for_negative_density() 10 0.04261 0.1058 0.135 4.12% Amr::InitializeInit() 1 0.0551 0.09065 0.1205 3.67% Amr::defBaseLevel() 1 0.0551 0.09064 0.1205 3.67% Castro::expand_state() 10 0.101 0.11 0.1191 3.63% FabArray::ParallelCopy() 41 0.07664 0.08811 0.1178 3.59% Castro::clean_state() 62 0.1022 0.1041 0.1078 3.29% Castro::initData() 1 0.03848 0.07336 0.1037 3.16% Castro::estTimeStep() 21 0.03305 0.06117 0.09892 3.02% Castro::do_old_sources() 10 0.08845 0.09289 0.09661 2.95% Amr::FinalizeInit() 1 0.02857 0.05859 0.09445 2.88% amrex::Copy() 193 0.06304 0.07762 0.08673 2.64% FabArray::ParallelCopy_finish() 41 0.03557 0.04819 0.08321 2.54% FabArray::setVal() 143 0.05565 0.06666 0.07264 2.21% Castro::initialize_advance() 10 0.05261 0.06699 0.07187 2.19% Castro::computeInitialDt() 2 0.002543 0.03264 0.06845 2.09% Castro::do_new_sources() 10 0.05619 0.06051 0.06646 2.03% Castro::computeTemp() 63 0.06264 0.06425 0.06576 2.00% Castro::reset_internal_energy(MultiFab) 63 0.04468 0.04589 0.04676 1.43% Castro::reset_internal_energy(Fab) 1008 0.04443 0.04563 0.0465 1.42% FabArray::ParallelCopy_nowait() 41 0.03455 0.03984 0.04184 1.28% StateDataPhysBCFunct::() 41 0.03032 0.03333 0.0374 1.14% StateData::FillBoundary(geom) 41 0.03022 0.03323 0.0373 1.14% Castro::normalize_species() 62 0.03343 0.03415 0.03572 1.09% Castro::construct_new_source() 50 0.02734 0.02887 0.03155 0.96% Castro::post_init() 1 0.02568 0.02585 0.02598 0.79% Gravity::interpolate_monopole_grav() 21 0.0248 0.0252 0.02554 0.78% Castro::construct_new_gravity_source() 10 0.02157 0.02281 0.02528 0.77% Castro::finalize_do_advance() 10 0.01429 0.0197 0.02395 0.73% Amr::writePlotFile() 2 0.02227 0.02241 0.02286 0.70% FabArray::setDomainBndry() 41 0.008572 0.01198 0.01565 0.48% Castro::post_timestep() 10 0.01371 0.01411 0.01462 0.45% Castro::apply_source_to_state() 20 0.01085 0.0127 0.01398 0.43% FabArray::Saxpy() 20 0.0108 0.01265 0.01392 0.42% VisMF::Write(FabArray) 2 0.008817 0.009611 0.01193 0.36% Castro::Castro() 1 0.01033 0.011 0.01188 0.36% Castro::check_for_nan() 20 0.009188 0.009901 0.01098 0.33% MultiFab::contains_nan() 20 0.009165 0.009877 0.01095 0.33% Castro::construct_old_source() 50 0.007068 0.009544 0.0102 0.31% Castro::construct_old_gravity_source() 10 0.007007 0.009475 0.01012 0.31% Castro::computeNewDt() 9 0.01007 0.01008 0.01009 0.31% Castro::initMFs() 1 0.006393 0.006822 0.008606 0.26% Castro::enforce_min_density() 62 0.006105 0.00641 0.006989 0.21% Other 203 0.01983 0.02314 0.02637 0.80% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8643 KiB 8652 KiB 8655 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6757 KiB 6764 KiB 6767 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7118 KiB 7125 KiB 7128 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4558 KiB 4567 KiB 4589 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 205 KiB 226 KiB 243 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 15 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2804 KiB 2806 KiB 2807 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 228 KiB 236 KiB 246 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 35 KiB 41 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2023 KiB 2025 KiB 2026 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 78 KiB 79 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 67 KiB 70 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.02-19-g2e4b667c1bd9) finalized