Initializing AMReX (26.03-43-g44ad97718951)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.03-43-g44ad97718951) initialized Starting run at 06:33:48 UTC on 2026-03-05. Successfully read inputs file ... Castro git describe: 26.03-7-g27235a2e3 AMReX git describe: 26.03-43-g44ad97718 Microphysics git describe: 26.03-1-g607ae869 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014922613 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.338104951 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.326869737 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.311909525 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.31124895 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.368591568 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.298970127 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.287258986 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.288940763 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.289608261 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.290042496 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007851136 seconds Ending run at 06:33:52 UTC on 2026-03-05. Run time = 3.309893985 Run time without initialization = 3.124794157 Average number of zones advanced per microsecond: 0.839 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.3048 ... 3.3082 ... 3.3099 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1164 2.1614 2.2216 67.12% Gravity::make_radial_gravity() 21 0.2834 0.2903 0.3091 9.34% check_for_negative_density() 10 0.03993 0.09423 0.1428 4.31% Castro::initData() 1 0.03483 0.07528 0.1176 3.55% Castro::estTimeStep() 21 0.02783 0.07171 0.117 3.53% amrex::Copy() 193 0.07241 0.08393 0.09176 2.77% FabArray::setVal() 143 0.06671 0.07098 0.07561 2.28% FabArray::ParallelCopy_finish() 41 0.03837 0.05337 0.074 2.24% FabArray::ParallelCopy_nowait() 41 0.03688 0.04227 0.05297 1.60% Castro::reset_internal_energy(Fab) 1008 0.0411 0.0449 0.04783 1.45% FillPatchIterator::Initialize 41 0.02849 0.03488 0.04199 1.27% StateData::FillBoundary(geom) 41 0.03014 0.0335 0.03609 1.09% Castro::normalize_species() 62 0.03366 0.03448 0.03565 1.08% Gravity::interpolate_monopole_grav() 21 0.0247 0.02511 0.02547 0.77% Castro::construct_new_gravity_source() 10 0.02187 0.02361 0.02519 0.76% Castro::computeTemp() 63 0.01655 0.01806 0.01901 0.57% Castro::initialize_do_advance() 10 0.01361 0.01713 0.01854 0.56% FabArray::setDomainBndry() 41 0.008679 0.01333 0.01592 0.48% Castro::initialize_advance() 10 0.01072 0.01276 0.01522 0.46% FabArray::Saxpy() 20 0.0123 0.01332 0.01391 0.42% MultiFab::contains_nan() 20 0.01038 0.01136 0.01241 0.38% VisMF::Write(FabArray) 2 0.009425 0.009862 0.01224 0.37% Amr::writePlotFile() 2 0.007532 0.0101 0.01062 0.32% Castro::initMFs() 1 0.006444 0.007794 0.01061 0.32% Castro::construct_old_gravity_source() 10 0.008142 0.01001 0.01046 0.32% StateData::define() 4 0.005304 0.006317 0.008536 0.26% Castro::construct_new_source() 50 0.006182 0.006334 0.006608 0.20% main() 1 0.003947 0.00429 0.004723 0.14% Gravity::get_new_grav_vector() 11 0.00273 0.00352 0.003874 0.12% Amr::coarseTimeStep() 10 0.001049 0.001672 0.003224 0.10% Gravity::get_old_grav_vector() 10 0.001444 0.002225 0.00282 0.09% Castro::finalize_do_advance() 10 0.0006006 0.001123 0.001226 0.04% AmrLevel::FillPatch() 41 0.0009077 0.001049 0.001153 0.03% Amr::timeStep() 10 0.0001257 0.0001795 0.0004542 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002509 0.0002626 0.0002775 0.01% Castro::clean_state() 62 0.0001459 0.0001569 0.0001801 0.01% Castro::do_advance_ctu() 10 0.0001274 0.0001509 0.0001657 0.01% StateDataPhysBCFunct::() 41 9.48e-05 0.0001041 0.0001301 0.00% Castro::do_old_sources() 10 7.497e-05 8.826e-05 0.0001129 0.00% Amr::FinalizeInit() 1 3.399e-06 1.849e-05 0.0001104 0.00% FillPatchIterator::FillFromLevel0() 41 9.357e-05 0.0001002 0.0001043 0.00% Castro::construct_old_source() 50 4.901e-05 8.071e-05 0.000102 0.00% FabArray::ParallelCopy() 41 7.94e-05 8.542e-05 9.905e-05 0.00% Castro::Castro() 1 5.846e-05 7.412e-05 9.368e-05 0.00% FillPatchSingleLevel 41 6.483e-05 6.809e-05 7.564e-05 0.00% Castro::subcycle_advance_ctu() 10 4.456e-05 5.172e-05 6.505e-05 0.00% Amr::defBaseLevel() 1 3.889e-05 5.406e-05 6.502e-05 0.00% Castro::do_new_sources() 10 5.047e-05 5.759e-05 6.496e-05 0.00% Castro::computeNewDt() 9 8.442e-06 1.827e-05 6.324e-05 0.00% Castro::advance() 10 3.656e-05 4.29e-05 5.65e-05 0.00% Castro::apply_source_to_state() 20 4.539e-05 4.98e-05 5.481e-05 0.00% Castro::construct_old_gravity() 10 3.471e-05 3.752e-05 4.886e-05 0.00% Castro::construct_new_gravity() 10 3.101e-05 3.546e-05 4.393e-05 0.00% Castro::check_for_nan() 20 2.251e-05 2.604e-05 3.255e-05 0.00% Castro::expand_state() 10 1.903e-05 2.226e-05 2.607e-05 0.00% Castro::post_timestep() 10 1.417e-05 1.562e-05 1.798e-05 0.00% AmrLevel::AmrLevel(dm) 1 6.683e-06 1.076e-05 1.568e-05 0.00% Castro::post_init() 1 2.593e-06 4.216e-06 9.771e-06 0.00% Castro::computeInitialDt() 2 6.242e-06 6.772e-06 8.224e-06 0.00% Amr::InitializeInit() 1 2.556e-06 3.452e-06 4.995e-06 0.00% Amr::init() 1 1.758e-06 2.281e-06 3.216e-06 0.00% Amr::initialInit() 1 1.324e-06 1.627e-06 1.944e-06 0.00% Other 260 0.01119 0.01625 0.01915 0.58% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.305 3.308 3.31 100.00% Amr::coarseTimeStep() 10 3.112 3.112 3.112 94.03% Amr::timeStep() 10 3.098 3.099 3.1 93.65% Castro::advance() 10 3.084 3.085 3.085 93.21% Castro::subcycle_advance_ctu() 10 3.005 3.009 3.013 91.03% Castro::do_advance_ctu() 10 3.005 3.009 3.013 91.02% Castro::construct_ctu_hydro_source() 10 2.268 2.275 2.282 68.95% Gravity::make_radial_gravity() 21 0.3002 0.3072 0.3241 9.79% AmrLevel::FillPatch() 41 0.1968 0.2123 0.223 6.74% Gravity::get_new_grav_vector() 11 0.2048 0.2061 0.2072 6.26% Castro::construct_old_gravity() 10 0.1792 0.1839 0.1987 6.00% Gravity::get_old_grav_vector() 10 0.1784 0.1832 0.198 5.98% FillPatchIterator::Initialize 41 0.1671 0.1778 0.1865 5.64% Amr::init() 1 0.1803 0.1834 0.1848 5.58% Castro::construct_new_gravity() 10 0.1824 0.1833 0.1841 5.56% Castro::initialize_do_advance() 10 0.1478 0.1638 0.1705 5.15% Amr::initialInit() 1 0.1653 0.1684 0.1698 5.13% check_for_negative_density() 10 0.03993 0.09423 0.1428 4.31% Amr::InitializeInit() 1 0.0586 0.09985 0.1416 4.28% Amr::defBaseLevel() 1 0.05859 0.09984 0.1416 4.28% FillPatchIterator::FillFromLevel0() 41 0.1237 0.1296 0.1415 4.27% FillPatchSingleLevel 41 0.1236 0.1295 0.1414 4.27% Castro::initData() 1 0.03814 0.07881 0.1209 3.65% Castro::expand_state() 10 0.1018 0.1126 0.1193 3.60% Castro::estTimeStep() 21 0.02783 0.07171 0.117 3.53% FabArray::ParallelCopy() 41 0.08841 0.09581 0.1111 3.36% Amr::FinalizeInit() 1 0.02677 0.06854 0.1109 3.35% Castro::do_old_sources() 10 0.0976 0.1048 0.1099 3.32% Castro::clean_state() 62 0.09767 0.1033 0.107 3.23% amrex::Copy() 193 0.07241 0.08393 0.09176 2.77% Castro::computeInitialDt() 2 0.002475 0.04415 0.08651 2.61% Castro::initialize_advance() 10 0.06872 0.07234 0.07634 2.31% FabArray::setVal() 143 0.06671 0.07098 0.07561 2.28% FabArray::ParallelCopy_finish() 41 0.03837 0.05337 0.074 2.24% Castro::do_new_sources() 10 0.05877 0.06276 0.06734 2.03% Castro::computeTemp() 63 0.05792 0.06322 0.06677 2.02% FabArray::ParallelCopy_nowait() 41 0.03698 0.04236 0.05306 1.60% Castro::reset_internal_energy(MultiFab) 63 0.04138 0.04516 0.0481 1.45% Castro::reset_internal_energy(Fab) 1008 0.0411 0.0449 0.04783 1.45% StateDataPhysBCFunct::() 41 0.03024 0.03361 0.03622 1.09% StateData::FillBoundary(geom) 41 0.03014 0.0335 0.03609 1.09% Castro::normalize_species() 62 0.03366 0.03448 0.03565 1.08% Castro::construct_new_source() 50 0.02814 0.02994 0.03161 0.96% Gravity::interpolate_monopole_grav() 21 0.0247 0.02511 0.02547 0.77% Castro::construct_new_gravity_source() 10 0.02187 0.02361 0.02519 0.76% Castro::post_init() 1 0.02415 0.02421 0.02426 0.73% Amr::writePlotFile() 2 0.02294 0.02299 0.02311 0.70% Castro::finalize_do_advance() 10 0.01426 0.01858 0.02263 0.68% FabArray::setDomainBndry() 41 0.008679 0.01333 0.01592 0.48% Castro::post_timestep() 10 0.01311 0.01406 0.01465 0.44% Castro::Castro() 1 0.009618 0.01147 0.01463 0.44% Castro::apply_source_to_state() 20 0.01235 0.01337 0.01396 0.42% FabArray::Saxpy() 20 0.0123 0.01332 0.01391 0.42% Castro::check_for_nan() 20 0.01041 0.01138 0.01244 0.38% MultiFab::contains_nan() 20 0.01038 0.01136 0.01241 0.38% VisMF::Write(FabArray) 2 0.009425 0.009862 0.01224 0.37% Castro::initMFs() 1 0.006444 0.007794 0.01061 0.32% Castro::construct_old_source() 50 0.008191 0.01009 0.01055 0.32% Castro::construct_old_gravity_source() 10 0.008142 0.01001 0.01046 0.32% Castro::computeNewDt() 9 0.0101 0.01013 0.01016 0.31% AmrLevel::AmrLevel(dm) 1 0.005314 0.006328 0.008552 0.26% StateData::define() 4 0.005304 0.006317 0.008536 0.26% Other 260 0.01571 0.02419 0.02862 0.86% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 4 B 13 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8633 KiB 8639 KiB 8644 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6715 KiB 6722 KiB 6725 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7109 KiB 7118 KiB 7119 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4529 KiB 4533 KiB 4538 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 221 KiB 238 KiB 251 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 17 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2787 KiB 2790 KiB 2791 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 230 KiB 236 KiB 249 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 40 KiB 42 KiB 48 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2021 KiB 2022 KiB 2023 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 79 KiB 79 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 69 KiB 70 KiB 76 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.03-43-g44ad97718951) finalized