Initializing AMReX (26.03-46-g7674e50aff30)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.03-46-g7674e50aff30) initialized Starting run at 06:20:08 UTC on 2026-03-06. Successfully read inputs file ... Castro git describe: 26.03-9-g7ab449407 AMReX git describe: 26.03-46-g7674e50af Microphysics git describe: 26.03-1-g607ae869 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.014621349 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.329771786 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.32180059 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.309879167 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.308996733 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.355714328 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.295967568 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.284636098 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.287411813 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.287417315 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.286467453 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007554121 seconds Ending run at 06:20:11 UTC on 2026-03-06. Run time = 3.244377977 Run time without initialization = 3.080483667 Average number of zones advanced per microsecond: 0.851 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.2435 ... 3.2440 ... 3.2444 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0987 2.1609 2.2090 68.09% Gravity::make_radial_gravity() 21 0.2757 0.2833 0.2999 9.24% check_for_negative_density() 10 0.02289 0.07478 0.1402 4.32% Castro::estTimeStep() 21 0.02667 0.06315 0.103 3.17% Castro::initData() 1 0.0348 0.06926 0.1007 3.10% FabArray::ParallelCopy_finish() 41 0.03758 0.04977 0.0915 2.82% amrex::Copy() 193 0.06402 0.0807 0.08986 2.77% FabArray::setVal() 143 0.05583 0.0667 0.07263 2.24% Castro::reset_internal_energy(Fab) 1008 0.04495 0.04597 0.04757 1.47% FabArray::ParallelCopy_nowait() 41 0.03537 0.04061 0.04256 1.31% FillPatchIterator::Initialize 41 0.02766 0.0334 0.03569 1.10% StateData::FillBoundary(geom) 41 0.03146 0.03429 0.03557 1.10% Castro::normalize_species() 62 0.03372 0.03414 0.03468 1.07% Gravity::interpolate_monopole_grav() 21 0.02464 0.02499 0.02589 0.80% Castro::construct_new_gravity_source() 10 0.02167 0.02298 0.02449 0.75% Castro::computeTemp() 63 0.01804 0.01838 0.01901 0.59% Castro::initialize_do_advance() 10 0.01169 0.01674 0.01791 0.55% FabArray::setDomainBndry() 41 0.008263 0.01281 0.01563 0.48% Castro::initialize_advance() 10 0.005487 0.01065 0.01401 0.43% FabArray::Saxpy() 20 0.0108 0.01271 0.01363 0.42% VisMF::Write(FabArray) 2 0.009287 0.009872 0.01293 0.40% MultiFab::contains_nan() 20 0.01019 0.01079 0.01154 0.36% Castro::construct_old_gravity_source() 10 0.007221 0.009619 0.01022 0.31% Amr::writePlotFile() 2 0.007278 0.009492 0.009977 0.31% Castro::initMFs() 1 0.006621 0.007104 0.008497 0.26% Castro::enforce_min_density() 62 0.005986 0.006314 0.006622 0.20% Castro::construct_new_source() 50 0.00556 0.006064 0.006348 0.20% main() 1 0.00338 0.004062 0.004333 0.13% Gravity::get_new_grav_vector() 11 0.002964 0.003691 0.004072 0.13% Gravity::get_old_grav_vector() 10 0.001511 0.002113 0.002362 0.07% Amr::coarseTimeStep() 10 0.0007974 0.001659 0.002141 0.07% Castro::finalize_do_advance() 10 0.0005946 0.001209 0.001312 0.04% AmrLevel::FillPatch() 41 0.0007754 0.001007 0.001218 0.04% Amr::timeStep() 10 0.0001492 0.0001944 0.0004158 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002456 0.0002639 0.0002914 0.01% Castro::do_advance_ctu() 10 0.0001339 0.0001598 0.0001847 0.01% Castro::clean_state() 62 0.0001392 0.0001513 0.0001614 0.00% Castro::Castro() 1 6.154e-05 9.08e-05 0.0001124 0.00% StateDataPhysBCFunct::() 41 9.277e-05 0.0001017 0.0001117 0.00% FillPatchIterator::FillFromLevel0() 41 8.306e-05 9.634e-05 0.0001073 0.00% FabArray::ParallelCopy() 41 7.385e-05 9.03e-05 0.0001056 0.00% Castro::do_old_sources() 10 7.492e-05 8.965e-05 0.0001 0.00% Amr::FinalizeInit() 1 3.926e-06 1.417e-05 8.221e-05 0.00% Castro::construct_old_source() 50 5.153e-05 7.015e-05 7.879e-05 0.00% FillPatchSingleLevel 41 6.237e-05 6.9e-05 7.631e-05 0.00% Castro::do_new_sources() 10 5.382e-05 6.07e-05 6.665e-05 0.00% Castro::advance() 10 3.732e-05 4.761e-05 6.314e-05 0.00% Castro::subcycle_advance_ctu() 10 4.338e-05 5.25e-05 6.266e-05 0.00% Castro::construct_new_gravity() 10 3.227e-05 4.052e-05 5.99e-05 0.00% Castro::apply_source_to_state() 20 4e-05 4.996e-05 5.959e-05 0.00% Amr::defBaseLevel() 1 4.223e-05 4.709e-05 5.442e-05 0.00% Castro::construct_old_gravity() 10 3.123e-05 4.07e-05 4.45e-05 0.00% Castro::computeNewDt() 9 8.392e-06 1.537e-05 3.97e-05 0.00% Castro::check_for_nan() 20 2.295e-05 2.833e-05 3.808e-05 0.00% Castro::post_timestep() 10 1.432e-05 1.844e-05 3.268e-05 0.00% Castro::expand_state() 10 1.749e-05 2.164e-05 2.466e-05 0.00% Castro::computeInitialDt() 2 5.769e-06 7.269e-06 8.722e-06 0.00% Amr::InitializeInit() 1 2.428e-06 3.582e-06 7.629e-06 0.00% Castro::post_init() 1 2.263e-06 2.728e-06 3.211e-06 0.00% Amr::init() 1 1.949e-06 2.223e-06 2.49e-06 0.00% Amr::initialInit() 1 1.372e-06 1.602e-06 2.032e-06 0.00% Other 203 0.009347 0.01291 0.01463 0.45% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.244 3.244 3.244 100.00% Amr::coarseTimeStep() 10 3.069 3.069 3.069 94.58% Amr::timeStep() 10 3.055 3.056 3.057 94.21% Castro::advance() 10 3.041 3.041 3.042 93.75% Castro::subcycle_advance_ctu() 10 2.966 2.971 2.986 92.04% Castro::do_advance_ctu() 10 2.966 2.971 2.986 92.04% Castro::construct_ctu_hydro_source() 10 2.252 2.255 2.26 69.65% Gravity::make_radial_gravity() 21 0.2933 0.3004 0.3137 9.67% AmrLevel::FillPatch() 41 0.187 0.2046 0.2199 6.78% Gravity::get_new_grav_vector() 11 0.2005 0.2019 0.2029 6.25% FillPatchIterator::Initialize 41 0.1564 0.1713 0.1956 6.03% Castro::construct_old_gravity() 10 0.1748 0.1796 0.1904 5.87% Gravity::get_old_grav_vector() 10 0.1741 0.179 0.1897 5.85% Castro::construct_new_gravity() 10 0.1788 0.1798 0.1802 5.56% Castro::initialize_do_advance() 10 0.1569 0.1652 0.1692 5.22% Amr::init() 1 0.1624 0.1634 0.1636 5.04% FillPatchIterator::FillFromLevel0() 41 0.115 0.1251 0.1597 4.92% FillPatchSingleLevel 41 0.1149 0.125 0.1596 4.92% Amr::initialInit() 1 0.1476 0.149 0.1493 4.60% check_for_negative_density() 10 0.02289 0.07478 0.1402 4.32% FabArray::ParallelCopy() 41 0.07921 0.09056 0.1271 3.92% Castro::expand_state() 10 0.1061 0.1148 0.1248 3.85% Amr::InitializeInit() 1 0.05647 0.09086 0.1225 3.78% Amr::defBaseLevel() 1 0.05647 0.09085 0.1225 3.78% Castro::clean_state() 62 0.1026 0.1043 0.1072 3.31% Castro::initData() 1 0.03855 0.07302 0.1039 3.20% Castro::estTimeStep() 21 0.02667 0.06315 0.103 3.17% Castro::do_old_sources() 10 0.08939 0.0947 0.09752 3.01% Amr::FinalizeInit() 1 0.02607 0.05815 0.09285 2.86% FabArray::ParallelCopy_finish() 41 0.03758 0.04977 0.0915 2.82% amrex::Copy() 193 0.06402 0.0807 0.08986 2.77% FabArray::setVal() 143 0.05583 0.0667 0.07263 2.24% Castro::initialize_advance() 10 0.05112 0.06677 0.07246 2.23% Castro::computeInitialDt() 2 0.002408 0.03451 0.06914 2.13% Castro::computeTemp() 63 0.06332 0.06462 0.06682 2.06% Castro::do_new_sources() 10 0.05697 0.06096 0.06581 2.03% Castro::reset_internal_energy(MultiFab) 63 0.04521 0.04623 0.04784 1.47% Castro::reset_internal_energy(Fab) 1008 0.04495 0.04597 0.04757 1.47% FabArray::ParallelCopy_nowait() 41 0.03548 0.0407 0.04264 1.31% StateDataPhysBCFunct::() 41 0.03157 0.03439 0.03567 1.10% StateData::FillBoundary(geom) 41 0.03146 0.03429 0.03557 1.10% Castro::normalize_species() 62 0.03372 0.03414 0.03468 1.07% Castro::construct_new_source() 50 0.02769 0.02904 0.03078 0.95% Gravity::interpolate_monopole_grav() 21 0.02464 0.02499 0.02589 0.80% Castro::finalize_do_advance() 10 0.01455 0.01989 0.02517 0.78% Castro::construct_new_gravity_source() 10 0.02167 0.02298 0.02449 0.75% Castro::post_init() 1 0.0229 0.0234 0.02356 0.73% Amr::writePlotFile() 2 0.0219 0.02199 0.02241 0.69% FabArray::setDomainBndry() 41 0.008263 0.01281 0.01563 0.48% Castro::post_timestep() 10 0.01389 0.01427 0.01492 0.46% Castro::apply_source_to_state() 20 0.01084 0.01276 0.01369 0.42% FabArray::Saxpy() 20 0.0108 0.01271 0.01363 0.42% VisMF::Write(FabArray) 2 0.009287 0.009872 0.01293 0.40% Castro::Castro() 1 0.01049 0.01111 0.0121 0.37% Castro::check_for_nan() 20 0.01021 0.01082 0.01156 0.36% MultiFab::contains_nan() 20 0.01019 0.01079 0.01154 0.36% Castro::construct_old_source() 50 0.007273 0.009689 0.01029 0.32% Castro::construct_old_gravity_source() 10 0.007221 0.009619 0.01022 0.31% Castro::computeNewDt() 9 0.009962 0.009989 0.01001 0.31% Castro::initMFs() 1 0.006621 0.007104 0.008497 0.26% Castro::enforce_min_density() 62 0.005986 0.006314 0.006622 0.20% Other 203 0.01928 0.02427 0.02691 0.83% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 4 B 6 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8638 KiB 8650 KiB 8653 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6757 KiB 6761 KiB 6762 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7116 KiB 7124 KiB 7126 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4557 KiB 4566 KiB 4585 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 217 KiB 237 KiB 257 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 17 KiB 17 KiB 20 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2802 KiB 2806 KiB 2806 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 229 KiB 235 KiB 246 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 42 KiB 61 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2025 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 79 KiB 79 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 70 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.03-46-g7674e50aff30) finalized