Initializing AMReX (26.03-89-g53bc59660c96)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.03-89-g53bc59660c96) initialized Starting run at 05:18:23 UTC on 2026-03-17. Successfully read inputs file ... Castro git describe: 26.03-22-g44e4ce9a5 AMReX git describe: 26.03-89-g53bc59660 Microphysics git describe: 26.03-7-g736a456b reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.01524479 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.349875716 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.322819132 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.303549397 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.302889745 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.350709134 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.29897385 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.290185103 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.290603065 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.290445674 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.291062616 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007726065 seconds Ending run at 05:18:27 UTC on 2026-03-17. Run time = 3.290915684 Run time without initialization = 3.103850644 Average number of zones advanced per microsecond: 0.845 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.2896 ... 3.2903 ... 3.2911 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1288 2.1614 2.1976 66.77% Gravity::make_radial_gravity() 21 0.2825 0.2926 0.3048 9.26% check_for_negative_density() 10 0.06554 0.1021 0.1361 4.14% Castro::estTimeStep() 21 0.03363 0.07981 0.1208 3.67% Castro::initData() 1 0.03548 0.07265 0.1198 3.64% amrex::Copy() 193 0.06517 0.07828 0.08754 2.66% FabArray::ParallelCopy_finish() 41 0.03916 0.04774 0.08687 2.64% FabArray::setVal() 143 0.05485 0.06549 0.07126 2.17% Castro::reset_internal_energy(Fab) 1008 0.04384 0.04546 0.04655 1.41% FabArray::ParallelCopy_nowait() 41 0.03522 0.03964 0.04158 1.26% Castro::normalize_species() 62 0.03367 0.03432 0.03489 1.06% StateData::FillBoundary(geom) 41 0.03023 0.03294 0.03477 1.06% FillPatchIterator::Initialize 41 0.02767 0.03201 0.03428 1.04% Gravity::interpolate_monopole_grav() 21 0.02496 0.02523 0.02563 0.78% Castro::construct_new_gravity_source() 10 0.02167 0.02315 0.02505 0.76% Castro::computeTemp() 63 0.01793 0.01823 0.01858 0.56% Castro::initialize_do_advance() 10 0.01168 0.01648 0.01766 0.54% FabArray::setDomainBndry() 41 0.008603 0.01195 0.01456 0.44% FabArray::Saxpy() 20 0.01041 0.01257 0.01386 0.42% Castro::initialize_advance() 10 0.00528 0.01076 0.01371 0.42% Amr::writePlotFile() 2 0.007514 0.01087 0.01315 0.40% VisMF::Write(FabArray) 2 0.008599 0.009774 0.01275 0.39% MultiFab::contains_nan() 20 0.008728 0.009925 0.01114 0.34% Castro::construct_old_gravity_source() 10 0.006731 0.009379 0.01007 0.31% Castro::initMFs() 1 0.006542 0.007184 0.007633 0.23% Castro::enforce_min_density() 62 0.006065 0.006468 0.006828 0.21% Castro::construct_new_source() 50 0.005612 0.006022 0.006303 0.19% main() 1 0.003613 0.004312 0.004623 0.14% Gravity::get_new_grav_vector() 11 0.002763 0.003537 0.004002 0.12% Gravity::get_old_grav_vector() 10 0.00163 0.002029 0.00246 0.07% Amr::coarseTimeStep() 10 0.0008907 0.001235 0.002005 0.06% Castro::finalize_do_advance() 10 0.0005689 0.001137 0.001342 0.04% AmrLevel::FillPatch() 41 0.0007528 0.0009817 0.001133 0.03% Amr::timeStep() 10 0.0001236 0.0001889 0.0004708 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002595 0.000268 0.0002817 0.01% Castro::clean_state() 62 0.0001286 0.000142 0.0001634 0.00% Castro::do_advance_ctu() 10 0.0001321 0.0001457 0.0001631 0.00% StateDataPhysBCFunct::() 41 9.381e-05 0.0001071 0.0001307 0.00% FillPatchIterator::FillFromLevel0() 41 9.357e-05 0.0001029 0.0001166 0.00% Castro::do_old_sources() 10 6.528e-05 8.304e-05 9.987e-05 0.00% Castro::Castro() 1 6.511e-05 8.168e-05 9.762e-05 0.00% FabArray::ParallelCopy() 41 7.309e-05 8.003e-05 9.051e-05 0.00% Castro::construct_old_source() 50 4.303e-05 6.148e-05 7.333e-05 0.00% FillPatchSingleLevel 41 6.082e-05 6.568e-05 7.092e-05 0.00% Amr::FinalizeInit() 1 3.746e-06 1.246e-05 6.77e-05 0.00% Castro::do_new_sources() 10 4.686e-05 5.22e-05 6.138e-05 0.00% Castro::subcycle_advance_ctu() 10 4.23e-05 5.305e-05 6.113e-05 0.00% Castro::apply_source_to_state() 20 3.583e-05 5.107e-05 5.959e-05 0.00% Castro::advance() 10 3.325e-05 3.982e-05 4.566e-05 0.00% Amr::defBaseLevel() 1 3.413e-05 3.926e-05 4.386e-05 0.00% Castro::construct_old_gravity() 10 3.481e-05 3.67e-05 4.105e-05 0.00% Castro::construct_new_gravity() 10 2.808e-05 3.208e-05 3.465e-05 0.00% Castro::check_for_nan() 20 2.322e-05 2.606e-05 3.017e-05 0.00% Castro::expand_state() 10 2.02e-05 2.574e-05 2.869e-05 0.00% Castro::post_timestep() 10 1.439e-05 1.668e-05 2.077e-05 0.00% Castro::computeInitialDt() 2 5.964e-06 7.711e-06 1.547e-05 0.00% Castro::post_init() 1 8.386e-06 9.358e-06 1.048e-05 0.00% Castro::computeNewDt() 9 8.411e-06 9.087e-06 9.675e-06 0.00% Amr::InitializeInit() 1 2.292e-06 3.911e-06 9.542e-06 0.00% Amr::init() 1 1.69e-06 2.239e-06 2.777e-06 0.00% Amr::initialInit() 1 1.447e-06 1.768e-06 2.25e-06 0.00% Other 203 0.01051 0.0129 0.01495 0.45% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.29 3.29 3.291 100.00% Amr::coarseTimeStep() 10 3.092 3.092 3.092 93.94% Amr::timeStep() 10 3.078 3.079 3.079 93.56% Castro::advance() 10 3.064 3.065 3.065 93.13% Castro::subcycle_advance_ctu() 10 2.991 2.995 3.009 91.44% Castro::do_advance_ctu() 10 2.991 2.995 3.009 91.44% Castro::construct_ctu_hydro_source() 10 2.279 2.282 2.285 69.42% Gravity::make_radial_gravity() 21 0.2991 0.3088 0.3178 9.66% AmrLevel::FillPatch() 41 0.1848 0.1969 0.2188 6.65% Gravity::get_new_grav_vector() 11 0.2075 0.2088 0.2103 6.39% FillPatchIterator::Initialize 41 0.1534 0.1647 0.1924 5.85% Castro::construct_old_gravity() 10 0.1728 0.1798 0.1879 5.71% Gravity::get_old_grav_vector() 10 0.1721 0.1791 0.1872 5.69% Amr::init() 1 0.1859 0.1863 0.1869 5.68% Castro::construct_new_gravity() 10 0.1834 0.1843 0.1855 5.64% Amr::initialInit() 1 0.17 0.1708 0.1716 5.21% Castro::initialize_do_advance() 10 0.1538 0.1604 0.1673 5.08% FillPatchIterator::FillFromLevel0() 41 0.1134 0.1208 0.1561 4.74% FillPatchSingleLevel 41 0.1133 0.1207 0.156 4.74% Amr::InitializeInit() 1 0.05652 0.09404 0.142 4.32% Amr::defBaseLevel() 1 0.05651 0.09404 0.142 4.32% check_for_negative_density() 10 0.06554 0.1021 0.1361 4.14% Castro::initData() 1 0.03885 0.07624 0.1234 3.75% Castro::expand_state() 10 0.103 0.1102 0.1229 3.73% FabArray::ParallelCopy() 41 0.07979 0.08755 0.1223 3.72% Castro::estTimeStep() 21 0.03363 0.07981 0.1208 3.67% Amr::FinalizeInit() 1 0.029 0.07679 0.114 3.46% Castro::clean_state() 62 0.1023 0.104 0.1056 3.21% Castro::do_old_sources() 10 0.08812 0.09186 0.09547 2.90% Castro::computeInitialDt() 2 0.002868 0.05105 0.08815 2.68% amrex::Copy() 193 0.06517 0.07828 0.08754 2.66% FabArray::ParallelCopy_finish() 41 0.03916 0.04774 0.08687 2.64% FabArray::setVal() 143 0.05485 0.06549 0.07126 2.17% Castro::initialize_advance() 10 0.05139 0.06638 0.07025 2.13% Castro::do_new_sources() 10 0.05676 0.06075 0.06692 2.03% Castro::computeTemp() 63 0.06203 0.06396 0.0652 1.98% Castro::reset_internal_energy(MultiFab) 63 0.0441 0.04573 0.04683 1.42% Castro::reset_internal_energy(Fab) 1008 0.04384 0.04546 0.04655 1.41% FabArray::ParallelCopy_nowait() 41 0.03533 0.03973 0.04167 1.27% StateDataPhysBCFunct::() 41 0.03036 0.03305 0.0349 1.06% Castro::normalize_species() 62 0.03367 0.03432 0.03489 1.06% StateData::FillBoundary(geom) 41 0.03023 0.03294 0.03477 1.06% Castro::construct_new_source() 50 0.02769 0.02917 0.03136 0.95% Castro::post_init() 1 0.02527 0.02573 0.02607 0.79% Gravity::interpolate_monopole_grav() 21 0.02496 0.02523 0.02563 0.78% Castro::construct_new_gravity_source() 10 0.02167 0.02315 0.02505 0.76% Castro::finalize_do_advance() 10 0.0139 0.01989 0.0242 0.74% Amr::writePlotFile() 2 0.02287 0.02326 0.02368 0.72% FabArray::setDomainBndry() 41 0.008603 0.01195 0.01456 0.44% Castro::post_timestep() 10 0.01385 0.01412 0.01455 0.44% Castro::apply_source_to_state() 20 0.01044 0.01263 0.01391 0.42% FabArray::Saxpy() 20 0.01041 0.01257 0.01386 0.42% VisMF::Write(FabArray) 2 0.008599 0.009774 0.01275 0.39% Castro::Castro() 1 0.009914 0.01118 0.012 0.36% Castro::check_for_nan() 20 0.008755 0.009951 0.01116 0.34% MultiFab::contains_nan() 20 0.008728 0.009925 0.01114 0.34% Castro::construct_old_source() 50 0.006774 0.009441 0.01015 0.31% Castro::construct_old_gravity_source() 10 0.006731 0.009379 0.01007 0.31% Castro::computeNewDt() 9 0.01002 0.01003 0.01003 0.30% Castro::initMFs() 1 0.006542 0.007184 0.007633 0.23% Castro::enforce_min_density() 62 0.006065 0.006468 0.006828 0.21% Other 203 0.02063 0.02416 0.02755 0.84% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 3 B 4 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8639 KiB 8649 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6709 KiB 6715 KiB 6720 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7116 KiB 7124 KiB 7126 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4532 KiB 4537 KiB 4561 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 210 KiB 225 KiB 251 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2784 KiB 2787 KiB 2788 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 231 KiB 238 KiB 245 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 40 KiB 58 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 67 KiB 69 KiB 72 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.03-89-g53bc59660c96) finalized