Initializing AMReX (26.04-26-g7cdd955cdc3c)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.04-26-g7cdd955cdc3c) initialized Starting run at 05:17:35 UTC on 2026-04-09. Successfully read inputs file ... Castro git describe: 26.04-5-g4fe715b45 AMReX git describe: 26.04-26-g7cdd955cd Microphysics git describe: 26.04 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015050438 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.332008691 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.32589564 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.311800121 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.311007504 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.35566399 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.299742319 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.290959824 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.29041412 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.289308612 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.28947746 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007473473 seconds Ending run at 05:17:38 UTC on 2026-04-09. Run time = 3.276245756 Run time without initialization = 3.109495023 Average number of zones advanced per microsecond: 0.843 Average number of zones advanced per microsecond per rank: 0.105 TinyProfiler total time across processes [min...avg...max]: 3.2744 ... 3.2756 ... 3.2768 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1114 2.1813 2.2143 67.58% Gravity::make_radial_gravity() 21 0.2789 0.284 0.2998 9.15% check_for_negative_density() 10 0.03414 0.07098 0.1438 4.39% Castro::initData() 1 0.03578 0.07047 0.1024 3.12% Castro::estTimeStep() 21 0.02729 0.06293 0.09434 2.88% amrex::Copy() 193 0.07752 0.084 0.09093 2.78% FabArray::setVal() 143 0.0682 0.07145 0.07473 2.28% FabArray::ParallelCopy_finish() 41 0.0384 0.04604 0.05261 1.61% Castro::reset_internal_energy(Fab) 1008 0.04401 0.04563 0.0471 1.44% FabArray::ParallelCopy_nowait() 41 0.03878 0.04258 0.04376 1.34% FillPatchIterator::Initialize 41 0.02902 0.03417 0.03674 1.12% StateData::FillBoundary(geom) 41 0.02995 0.03389 0.03612 1.10% Castro::normalize_species() 62 0.03387 0.03484 0.03586 1.09% Gravity::interpolate_monopole_grav() 21 0.02518 0.02537 0.02573 0.79% Castro::construct_new_gravity_source() 10 0.02187 0.0237 0.02569 0.78% Castro::initialize_do_advance() 10 0.0167 0.01819 0.01976 0.60% Castro::computeTemp() 63 0.0179 0.01832 0.01855 0.57% FabArray::setDomainBndry() 41 0.009228 0.01263 0.01519 0.46% Castro::initialize_advance() 10 0.01062 0.01252 0.01496 0.46% FabArray::Saxpy() 20 0.0124 0.01352 0.01433 0.44% VisMF::Write(FabArray) 2 0.009285 0.009862 0.01232 0.38% Castro::construct_old_gravity_source() 10 0.01018 0.01054 0.01091 0.33% MultiFab::contains_nan() 20 0.009104 0.009853 0.01089 0.33% Amr::writePlotFile() 2 0.007283 0.009891 0.01047 0.32% Castro::initMFs() 1 0.006622 0.006959 0.007756 0.24% Castro::enforce_min_density() 62 0.006302 0.006577 0.006913 0.21% Castro::construct_new_source() 50 0.006179 0.006286 0.006456 0.20% main() 1 0.003855 0.004648 0.005308 0.16% Gravity::get_new_grav_vector() 11 0.003013 0.003723 0.004068 0.12% Gravity::get_old_grav_vector() 10 0.001672 0.002246 0.002704 0.08% Amr::coarseTimeStep() 10 0.0008784 0.001171 0.001546 0.05% Castro::finalize_do_advance() 10 0.001388 0.001406 0.001455 0.04% AmrLevel::FillPatch() 41 0.0008686 0.000968 0.001193 0.04% Amr::timeStep() 10 0.0001462 0.0001887 0.0003926 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002484 0.0002622 0.0002946 0.01% Castro::do_advance_ctu() 10 0.00015 0.0001598 0.0001674 0.01% Castro::clean_state() 62 0.0001259 0.0001398 0.0001537 0.00% StateDataPhysBCFunct::() 41 9.957e-05 0.0001184 0.0001299 0.00% FillPatchIterator::FillFromLevel0() 41 9.206e-05 0.0001049 0.0001254 0.00% Castro::Castro() 1 6.799e-05 8.771e-05 0.000115 0.00% FabArray::ParallelCopy() 41 8.188e-05 9.258e-05 0.0001072 0.00% Castro::do_old_sources() 10 8.187e-05 9.432e-05 0.0001072 0.00% Amr::FinalizeInit() 1 4.146e-06 1.652e-05 9.342e-05 0.00% Castro::construct_old_source() 50 6.018e-05 7.279e-05 9.035e-05 0.00% FillPatchSingleLevel 41 6.39e-05 7.1e-05 8.238e-05 0.00% Castro::do_new_sources() 10 4.932e-05 5.921e-05 6.782e-05 0.00% Castro::subcycle_advance_ctu() 10 4.835e-05 5.596e-05 6.716e-05 0.00% Castro::apply_source_to_state() 20 4.615e-05 5.096e-05 5.579e-05 0.00% Castro::construct_old_gravity() 10 3.379e-05 4.027e-05 5.242e-05 0.00% Castro::advance() 10 3.881e-05 4.267e-05 4.808e-05 0.00% Amr::defBaseLevel() 1 3.836e-05 4.235e-05 4.791e-05 0.00% Castro::construct_new_gravity() 10 3.2e-05 3.626e-05 4.397e-05 0.00% Castro::check_for_nan() 20 2.327e-05 2.812e-05 4.079e-05 0.00% Castro::expand_state() 10 2.206e-05 2.419e-05 2.771e-05 0.00% Castro::post_timestep() 10 1.401e-05 1.655e-05 1.914e-05 0.00% Castro::computeNewDt() 9 8.915e-06 9.562e-06 1.057e-05 0.00% Amr::init() 1 2.104e-06 3.515e-06 9.064e-06 0.00% Amr::InitializeInit() 1 2.654e-06 3.708e-06 8.662e-06 0.00% Castro::computeInitialDt() 2 6.316e-06 6.837e-06 7.415e-06 0.00% Castro::post_init() 1 2.548e-06 3.301e-06 4.261e-06 0.00% Amr::initialInit() 1 1.323e-06 1.828e-06 2.47e-06 0.00% Other 203 0.01063 0.01301 0.01523 0.46% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.274 3.276 3.277 100.00% Amr::coarseTimeStep() 10 3.097 3.097 3.097 94.51% Amr::timeStep() 10 3.084 3.084 3.085 94.13% Castro::advance() 10 3.07 3.07 3.07 93.69% Castro::subcycle_advance_ctu() 10 2.992 2.994 2.996 91.43% Castro::do_advance_ctu() 10 2.992 2.994 2.996 91.43% Castro::construct_ctu_hydro_source() 10 2.267 2.271 2.275 69.43% Gravity::make_radial_gravity() 21 0.2961 0.3011 0.3149 9.61% AmrLevel::FillPatch() 41 0.1875 0.2042 0.2151 6.56% Gravity::get_new_grav_vector() 11 0.2034 0.2039 0.2052 6.26% Castro::construct_old_gravity() 10 0.1763 0.1802 0.1917 5.85% Gravity::get_old_grav_vector() 10 0.1756 0.1795 0.191 5.83% Castro::construct_new_gravity() 10 0.1798 0.1807 0.1815 5.54% FillPatchIterator::Initialize 41 0.1602 0.1698 0.1789 5.46% Castro::initialize_do_advance() 10 0.1561 0.1662 0.1713 5.23% Amr::init() 1 0.1658 0.1662 0.1668 5.09% Amr::initialInit() 1 0.1505 0.151 0.1516 4.63% check_for_negative_density() 10 0.03414 0.07098 0.1438 4.39% FillPatchIterator::FillFromLevel0() 41 0.1172 0.123 0.1298 3.96% FillPatchSingleLevel 41 0.1171 0.1229 0.1297 3.96% Amr::InitializeInit() 1 0.05652 0.09151 0.1235 3.77% Amr::defBaseLevel() 1 0.05651 0.09151 0.1235 3.77% Castro::expand_state() 10 0.1028 0.114 0.1203 3.67% Castro::clean_state() 62 0.1033 0.1049 0.1067 3.26% Castro::initData() 1 0.0395 0.07406 0.106 3.24% Castro::do_old_sources() 10 0.09154 0.0964 0.1002 3.06% Amr::FinalizeInit() 1 0.02709 0.05951 0.09486 2.90% Castro::estTimeStep() 21 0.02729 0.06293 0.09434 2.88% FabArray::ParallelCopy() 41 0.08232 0.08881 0.09337 2.85% amrex::Copy() 193 0.07752 0.084 0.09093 2.78% FabArray::setVal() 143 0.0682 0.07145 0.07473 2.28% Castro::initialize_advance() 10 0.07043 0.07223 0.0746 2.28% Castro::computeInitialDt() 2 0.002481 0.03487 0.07025 2.14% Castro::do_new_sources() 10 0.05962 0.06335 0.06785 2.07% Castro::computeTemp() 63 0.06216 0.06421 0.06591 2.01% FabArray::ParallelCopy_finish() 41 0.0384 0.04604 0.05261 1.61% Castro::reset_internal_energy(MultiFab) 63 0.04426 0.04589 0.04736 1.45% Castro::reset_internal_energy(Fab) 1008 0.04401 0.04563 0.0471 1.44% FabArray::ParallelCopy_nowait() 41 0.03887 0.04268 0.04384 1.34% StateDataPhysBCFunct::() 41 0.03007 0.034 0.03624 1.11% StateData::FillBoundary(geom) 41 0.02995 0.03389 0.03612 1.10% Castro::normalize_species() 62 0.03387 0.03484 0.03586 1.09% Castro::construct_new_source() 50 0.02811 0.02999 0.03195 0.98% Gravity::interpolate_monopole_grav() 21 0.02518 0.02537 0.02573 0.79% Castro::construct_new_gravity_source() 10 0.02187 0.0237 0.02569 0.78% Castro::post_init() 1 0.02425 0.02444 0.02454 0.75% Castro::finalize_do_advance() 10 0.0154 0.01933 0.02313 0.71% Amr::writePlotFile() 2 0.02269 0.02274 0.02281 0.70% FabArray::setDomainBndry() 41 0.009228 0.01263 0.01519 0.46% Castro::post_timestep() 10 0.01403 0.01424 0.01444 0.44% Castro::apply_source_to_state() 20 0.01245 0.01357 0.01438 0.44% FabArray::Saxpy() 20 0.0124 0.01352 0.01433 0.44% VisMF::Write(FabArray) 2 0.009285 0.009862 0.01232 0.38% Castro::Castro() 1 0.01025 0.011 0.012 0.37% Castro::construct_old_source() 50 0.01024 0.01061 0.01099 0.34% Castro::check_for_nan() 20 0.00913 0.009882 0.01091 0.33% Castro::construct_old_gravity_source() 10 0.01018 0.01054 0.01091 0.33% MultiFab::contains_nan() 20 0.009104 0.009853 0.01089 0.33% Castro::computeNewDt() 9 0.01013 0.01015 0.01017 0.31% Castro::initMFs() 1 0.006622 0.006959 0.007756 0.24% Castro::enforce_min_density() 62 0.006302 0.006577 0.006913 0.21% Other 203 0.02074 0.02423 0.02809 0.86% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8639 KiB 8647 KiB 8651 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6748 KiB 6755 KiB 6757 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7114 KiB 7123 KiB 7126 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4552 KiB 4555 KiB 4558 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 212 KiB 234 KiB 247 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 17 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2801 KiB 2804 KiB 2805 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 229 KiB 233 KiB 244 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 38 KiB 41 KiB 44 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 79 KiB 79 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 68 KiB 70 KiB 74 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.04-26-g7cdd955cdc3c) finalized