Initializing AMReX (26.04-26-g7cdd955cdc3c)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.04-26-g7cdd955cdc3c) initialized Starting run at 05:17:49 UTC on 2026-04-10. Successfully read inputs file ... Castro git describe: 26.04-6-g9e0439ba0 AMReX git describe: 26.04-26-g7cdd955cd Microphysics git describe: 26.04 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015207911 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.325538476 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.325597029 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.304562428 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.305623161 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.352841918 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.297256408 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.289561062 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.288480141 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.288377011 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.288725554 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007394006 seconds Ending run at 05:17:53 UTC on 2026-04-10. Run time = 3.266154132 Run time without initialization = 3.078925736 Average number of zones advanced per microsecond: 0.851 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.2647 ... 3.2656 ... 3.2663 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.1210 2.1521 2.2030 67.45% Gravity::make_radial_gravity() 21 0.2793 0.2884 0.3015 9.23% check_for_negative_density() 10 0.03584 0.09104 0.1261 3.86% Castro::initData() 1 0.03515 0.07169 0.1192 3.65% Castro::estTimeStep() 21 0.03391 0.08045 0.1128 3.45% amrex::Copy() 193 0.06335 0.0773 0.08556 2.62% FabArray::ParallelCopy_finish() 41 0.03725 0.04882 0.08151 2.50% FabArray::setVal() 143 0.0553 0.06652 0.07395 2.26% Castro::reset_internal_energy(Fab) 1008 0.04111 0.04474 0.04655 1.43% FabArray::ParallelCopy_nowait() 41 0.03483 0.04001 0.04213 1.29% Castro::normalize_species() 62 0.03343 0.03435 0.0352 1.08% StateData::FillBoundary(geom) 41 0.03018 0.03312 0.03509 1.07% FillPatchIterator::Initialize 41 0.02748 0.03177 0.0344 1.05% Castro::construct_new_gravity_source() 10 0.02178 0.02315 0.02531 0.77% Gravity::interpolate_monopole_grav() 21 0.02432 0.02494 0.02522 0.77% Castro::computeTemp() 63 0.01679 0.01806 0.01865 0.57% Castro::initialize_do_advance() 10 0.0117 0.01655 0.01837 0.56% Castro::initialize_advance() 10 0.005308 0.01081 0.01385 0.42% FabArray::setDomainBndry() 41 0.009293 0.01143 0.01382 0.42% FabArray::Saxpy() 20 0.01065 0.01259 0.01343 0.41% Amr::writePlotFile() 2 0.007238 0.01065 0.01312 0.40% VisMF::Write(FabArray) 2 0.008551 0.009658 0.01259 0.39% MultiFab::contains_nan() 20 0.009275 0.01014 0.01129 0.35% Castro::construct_old_gravity_source() 10 0.006874 0.009562 0.01028 0.31% Castro::initMFs() 1 0.006578 0.007096 0.008341 0.26% Castro::enforce_min_density() 62 0.006123 0.006383 0.006807 0.21% Castro::construct_new_source() 50 0.005763 0.006041 0.006195 0.19% main() 1 0.003958 0.004207 0.004481 0.14% Gravity::get_new_grav_vector() 11 0.002815 0.003385 0.003846 0.12% Amr::coarseTimeStep() 10 0.001073 0.001834 0.002801 0.09% Gravity::get_old_grav_vector() 10 0.001569 0.002053 0.002464 0.08% Castro::finalize_do_advance() 10 0.0005901 0.001183 0.001546 0.05% AmrLevel::FillPatch() 41 0.0007751 0.0009175 0.001136 0.03% Amr::timeStep() 10 0.0001391 0.0001883 0.0003974 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002429 0.0002616 0.0002975 0.01% Castro::do_advance_ctu() 10 0.0001423 0.0001637 0.0001783 0.01% Castro::clean_state() 62 0.0001327 0.0001388 0.000148 0.00% StateDataPhysBCFunct::() 41 0.0001014 0.0001148 0.0001471 0.00% FillPatchIterator::FillFromLevel0() 41 9.096e-05 9.867e-05 0.000114 0.00% Castro::Castro() 1 5.79e-05 7.872e-05 0.0001078 0.00% Castro::do_old_sources() 10 7.817e-05 8.699e-05 0.0001007 0.00% FabArray::ParallelCopy() 41 7.422e-05 8.171e-05 8.91e-05 0.00% FillPatchSingleLevel 41 6e-05 6.861e-05 8.368e-05 0.00% Castro::subcycle_advance_ctu() 10 4.772e-05 5.603e-05 7.711e-05 0.00% Amr::FinalizeInit() 1 3.855e-06 1.349e-05 7.627e-05 0.00% Castro::construct_old_source() 50 4.826e-05 6.494e-05 7.324e-05 0.00% Castro::do_new_sources() 10 4.993e-05 5.547e-05 6.285e-05 0.00% Castro::advance() 10 3.492e-05 4.48e-05 6.014e-05 0.00% Castro::apply_source_to_state() 20 3.938e-05 4.931e-05 5.537e-05 0.00% Castro::construct_new_gravity() 10 3.101e-05 3.619e-05 5.376e-05 0.00% Amr::defBaseLevel() 1 3.544e-05 4.5e-05 5.185e-05 0.00% Castro::construct_old_gravity() 10 3.255e-05 3.594e-05 3.872e-05 0.00% Castro::check_for_nan() 20 2.33e-05 2.596e-05 2.789e-05 0.00% Castro::expand_state() 10 1.999e-05 2.247e-05 2.511e-05 0.00% Castro::post_timestep() 10 1.51e-05 1.676e-05 1.914e-05 0.00% Castro::computeNewDt() 9 8.561e-06 9.578e-06 1.021e-05 0.00% Castro::post_init() 1 2.42e-06 4.429e-06 1e-05 0.00% Amr::InitializeInit() 1 2.543e-06 3.915e-06 8.268e-06 0.00% Castro::computeInitialDt() 2 5.492e-06 6.522e-06 7.882e-06 0.00% Amr::init() 1 1.884e-06 2.142e-06 2.688e-06 0.00% Amr::initialInit() 1 1.292e-06 1.655e-06 2.046e-06 0.00% Other 203 0.01046 0.01278 0.01512 0.46% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.265 3.266 3.266 100.00% Amr::coarseTimeStep() 10 3.067 3.067 3.067 93.90% Amr::timeStep() 10 3.053 3.054 3.055 93.52% Castro::advance() 10 3.039 3.04 3.04 93.08% Castro::subcycle_advance_ctu() 10 2.965 2.97 2.983 91.32% Castro::do_advance_ctu() 10 2.965 2.97 2.983 91.32% Castro::construct_ctu_hydro_source() 10 2.258 2.262 2.267 69.40% Gravity::make_radial_gravity() 21 0.2947 0.3041 0.3144 9.63% AmrLevel::FillPatch() 41 0.1817 0.1971 0.2104 6.44% Gravity::get_new_grav_vector() 11 0.2055 0.2068 0.2078 6.36% Amr::init() 1 0.1857 0.1864 0.1868 5.72% FillPatchIterator::Initialize 41 0.1527 0.1656 0.1861 5.70% Castro::construct_old_gravity() 10 0.1708 0.1767 0.1855 5.68% Gravity::get_old_grav_vector() 10 0.1701 0.176 0.1848 5.66% Castro::construct_new_gravity() 10 0.1814 0.1822 0.1826 5.59% Amr::initialInit() 1 0.1703 0.171 0.1716 5.25% Castro::initialize_do_advance() 10 0.1539 0.1601 0.1644 5.03% FillPatchIterator::FillFromLevel0() 41 0.1142 0.1224 0.1483 4.54% FillPatchSingleLevel 41 0.1141 0.1223 0.1482 4.54% Amr::InitializeInit() 1 0.05572 0.0932 0.1414 4.33% Amr::defBaseLevel() 1 0.05572 0.09319 0.1414 4.33% check_for_negative_density() 10 0.03584 0.09104 0.1261 3.86% Castro::initData() 1 0.03902 0.07547 0.123 3.77% Castro::expand_state() 10 0.1021 0.1103 0.1201 3.68% FabArray::ParallelCopy() 41 0.07925 0.08901 0.1165 3.57% Amr::FinalizeInit() 1 0.0292 0.07775 0.1148 3.51% Castro::estTimeStep() 21 0.03391 0.08045 0.1128 3.45% Castro::clean_state() 62 0.09801 0.103 0.1052 3.22% Castro::do_old_sources() 10 0.08826 0.09208 0.09539 2.92% Castro::computeInitialDt() 2 0.002856 0.05172 0.08866 2.71% amrex::Copy() 193 0.06335 0.0773 0.08556 2.62% FabArray::ParallelCopy_finish() 41 0.03725 0.04882 0.08151 2.50% FabArray::setVal() 143 0.0553 0.06652 0.07395 2.26% Castro::initialize_advance() 10 0.05308 0.06688 0.07135 2.18% Castro::do_new_sources() 10 0.05653 0.06065 0.06646 2.03% Castro::computeTemp() 63 0.05827 0.06306 0.06527 2.00% Castro::reset_internal_energy(MultiFab) 63 0.04136 0.045 0.0468 1.43% Castro::reset_internal_energy(Fab) 1008 0.04111 0.04474 0.04655 1.43% FabArray::ParallelCopy_nowait() 41 0.03495 0.0401 0.04222 1.29% StateDataPhysBCFunct::() 41 0.03028 0.03324 0.03522 1.08% Castro::normalize_species() 62 0.03343 0.03435 0.0352 1.08% StateData::FillBoundary(geom) 41 0.03018 0.03312 0.03509 1.07% Castro::construct_new_source() 50 0.02788 0.0292 0.03141 0.96% Castro::post_init() 1 0.0256 0.02599 0.02622 0.80% Castro::construct_new_gravity_source() 10 0.02178 0.02315 0.02531 0.77% Gravity::interpolate_monopole_grav() 21 0.02432 0.02494 0.02522 0.77% Castro::finalize_do_advance() 10 0.01361 0.01996 0.02506 0.77% Amr::writePlotFile() 2 0.02261 0.02293 0.02347 0.72% Castro::post_timestep() 10 0.01308 0.01395 0.01484 0.45% FabArray::setDomainBndry() 41 0.009293 0.01143 0.01382 0.42% Castro::apply_source_to_state() 20 0.01068 0.01264 0.01348 0.41% FabArray::Saxpy() 20 0.01065 0.01259 0.01343 0.41% VisMF::Write(FabArray) 2 0.008551 0.009658 0.01259 0.39% Castro::Castro() 1 0.01071 0.01108 0.01194 0.37% Castro::check_for_nan() 20 0.0093 0.01016 0.01132 0.35% MultiFab::contains_nan() 20 0.009275 0.01014 0.01129 0.35% Castro::construct_old_source() 50 0.006922 0.009627 0.01035 0.32% Castro::construct_old_gravity_source() 10 0.006874 0.009562 0.01028 0.31% Castro::computeNewDt() 9 0.00994 0.009961 0.00999 0.31% Castro::initMFs() 1 0.006578 0.007096 0.008341 0.26% Castro::enforce_min_density() 62 0.006123 0.006383 0.006807 0.21% Other 203 0.0205 0.02407 0.02781 0.85% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 2 B 3 B 5 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 14 MiB 14 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8640 KiB 8649 KiB 8652 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6705 KiB 6712 KiB 6715 KiB 7153 KiB 7153 KiB 7153 KiB StateData::define() 32 7116 KiB 7124 KiB 7126 KiB 7153 KiB 7153 KiB 7153 KiB Castro::initialize_do_advance() 80 4525 KiB 4532 KiB 4554 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 209 KiB 227 KiB 245 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 14 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2783 KiB 2785 KiB 2787 KiB 3000 KiB 3000 KiB 3000 KiB Gravity::make_radial_gravity() 168 229 KiB 236 KiB 245 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 37 KiB 42 KiB 56 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 81 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 66 KiB 69 KiB 72 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.04-26-g7cdd955cdc3c) finalized