Initializing AMReX (26.04-97-gd10a21ad849d)... MPI initialized with 8 MPI processes MPI initialized with thread support level 3 AMReX (26.04-97-gd10a21ad849d) initialized Starting run at 05:35:33 UTC on 2026-04-22. Successfully read inputs file ... Castro git describe: 26.04-6-g9e0439ba0 AMReX git describe: 26.04-97-gd10a21ad8 Microphysics git describe: 26.04-3-ge03e94b4 reading extern runtime parameters ... 3 Species: C12 O16 Mg24 Successfully read inputs file ... INITIAL GRIDS Level 0 8 grids 262144 cells 100 % of domain smallest grid: 32 x 32 x 32 biggest grid: 32 x 32 x 32 PLOTFILE: file = dustcollapse-3d-monopole_plt00000 Write plotfile time = 0.015029955 seconds [Level 0 step 1] ADVANCE at time 0 with dt = 4.541742215e-05 [Level 0 step 1] Advanced 262144 cells STEP = 1 TIME = 4.541742215e-05 DT = 4.541742215e-05 [STEP 1] Coarse TimeStep time: 0.33200985 [STEP 1] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 2] ADVANCE at time 4.541742215e-05 with dt = 4.768829326e-05 [Level 0 step 2] Advanced 262144 cells STEP = 2 TIME = 9.31057154e-05 DT = 4.768829326e-05 [STEP 2] Coarse TimeStep time: 0.328906236 [STEP 2] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 3] ADVANCE at time 9.31057154e-05 with dt = 5.007270792e-05 [Level 0 step 3] Advanced 262144 cells STEP = 3 TIME = 0.0001431784233 DT = 5.007270792e-05 [STEP 3] Coarse TimeStep time: 0.332913739 [STEP 3] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 4] ADVANCE at time 0.0001431784233 with dt = 5.257634331e-05 [Level 0 step 4] Advanced 262144 cells STEP = 4 TIME = 0.0001957547666 DT = 5.257634331e-05 [STEP 4] Coarse TimeStep time: 0.321242421 [STEP 4] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 5] ADVANCE at time 0.0001957547666 with dt = 5.520516048e-05 [Level 0 step 5] Advanced 262144 cells STEP = 5 TIME = 0.0002509599271 DT = 5.520516048e-05 [STEP 5] Coarse TimeStep time: 0.381548476 [STEP 5] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 6] ADVANCE at time 0.0002509599271 with dt = 5.79654185e-05 [Level 0 step 6] Advanced 262144 cells STEP = 6 TIME = 0.0003089253456 DT = 5.79654185e-05 [STEP 6] Coarse TimeStep time: 0.281383391 [STEP 6] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 7] ADVANCE at time 0.0003089253456 with dt = 6.086368943e-05 [Level 0 step 7] Advanced 262144 cells STEP = 7 TIME = 0.000369789035 DT = 6.086368943e-05 [STEP 7] Coarse TimeStep time: 0.276420058 [STEP 7] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 8] ADVANCE at time 0.000369789035 with dt = 6.39068739e-05 [Level 0 step 8] Advanced 262144 cells STEP = 8 TIME = 0.000433695909 DT = 6.39068739e-05 [STEP 8] Coarse TimeStep time: 0.272494955 [STEP 8] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 9] ADVANCE at time 0.000433695909 with dt = 6.71022176e-05 [Level 0 step 9] Advanced 262144 cells STEP = 9 TIME = 0.0005007981265 DT = 6.71022176e-05 [STEP 9] Coarse TimeStep time: 0.273412652 [STEP 9] FAB kilobyte spread across MPI nodes: [57998 ... 57998] [Level 0 step 10] ADVANCE at time 0.0005007981265 with dt = 7.045732848e-05 [Level 0 step 10] Advanced 262144 cells STEP = 10 TIME = 0.000571255455 DT = 7.045732848e-05 [STEP 10] Coarse TimeStep time: 0.274356628 [STEP 10] FAB kilobyte spread across MPI nodes: [57998 ... 57998] PLOTFILE: file = dustcollapse-3d-monopole_plt00010 Write plotfile time = 0.007753187 seconds Ending run at 05:35:37 UTC on 2026-04-22. Run time = 3.265721971 Run time without initialization = 3.085258257 Average number of zones advanced per microsecond: 0.850 Average number of zones advanced per microsecond per rank: 0.106 TinyProfiler total time across processes [min...avg...max]: 3.2617 ... 3.2644 ... 3.2657 ------------------------------------------------------------------------------------------- Name NCalls Excl. Min Excl. Avg Excl. Max Max % ------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 10 2.0178 2.0693 2.1219 64.97% Gravity::make_radial_gravity() 21 0.2879 0.292 0.303 9.28% check_for_negative_density() 10 0.08206 0.1315 0.1874 5.74% Castro::estTimeStep() 21 0.03159 0.07159 0.1121 3.43% Castro::initData() 1 0.03446 0.07085 0.1079 3.30% amrex::Copy() 193 0.07745 0.08907 0.1018 3.12% FabArray::setVal() 143 0.06591 0.06915 0.07583 2.32% FabArray::ParallelCopy_finish() 41 0.03565 0.05938 0.07518 2.30% FillPatchIterator::Initialize 41 0.04038 0.04548 0.04994 1.53% Castro::reset_internal_energy(Fab) 1008 0.04468 0.04565 0.04658 1.43% FabArray::ParallelCopy_nowait() 41 0.03173 0.03757 0.04028 1.23% StateData::FillBoundary(geom) 41 0.03026 0.03331 0.03576 1.10% Castro::normalize_species() 62 0.03365 0.03411 0.03533 1.08% Gravity::interpolate_monopole_grav() 21 0.02502 0.02615 0.02792 0.85% Castro::construct_new_gravity_source() 10 0.02155 0.02292 0.02485 0.76% Castro::initialize_do_advance() 10 0.01751 0.01934 0.02162 0.66% Castro::computeTemp() 63 0.01848 0.01865 0.019 0.58% FabArray::Saxpy() 20 0.01175 0.01281 0.01362 0.42% VisMF::Write(FabArray) 2 0.009405 0.009881 0.01245 0.38% FabArray::setDomainBndry() 41 0.009011 0.01108 0.01224 0.37% MultiFab::contains_nan() 20 0.009385 0.01028 0.01113 0.34% Castro::initialize_advance() 10 0.008321 0.009394 0.01097 0.34% Amr::writePlotFile() 2 0.007394 0.01008 0.01057 0.32% Castro::initMFs() 1 0.006412 0.007695 0.01055 0.32% Castro::construct_old_gravity_source() 10 0.007953 0.00932 0.009928 0.30% StateData::define() 4 0.005318 0.006351 0.008567 0.26% Castro::construct_new_source() 50 0.006196 0.006306 0.006481 0.20% Amr::coarseTimeStep() 10 0.0009976 0.005375 0.006416 0.20% Castro::finalize_do_advance() 10 0.001209 0.001933 0.006111 0.19% Gravity::get_new_grav_vector() 11 0.003548 0.003807 0.004076 0.12% Gravity::get_old_grav_vector() 10 0.001949 0.002513 0.003017 0.09% main() 1 0.001978 0.002042 0.002126 0.07% AmrLevel::FillPatch() 41 0.001166 0.001302 0.001549 0.05% Amr::timeStep() 10 0.0001456 0.0001846 0.0003778 0.01% Castro::reset_internal_energy(MultiFab) 63 0.0002519 0.0002623 0.0002916 0.01% Castro::do_advance_ctu() 10 0.0001498 0.0001626 0.0001803 0.01% Castro::clean_state() 62 0.0001258 0.0001457 0.0001623 0.00% StateDataPhysBCFunct::() 41 0.0001061 0.0001188 0.0001374 0.00% FillPatchIterator::FillFromLevel0() 41 0.0001028 0.0001101 0.0001204 0.00% Castro::do_old_sources() 10 8.366e-05 9.668e-05 0.0001097 0.00% FabArray::ParallelCopy() 41 8.181e-05 9.17e-05 0.0001043 0.00% Castro::Castro() 1 5.445e-05 7.099e-05 9.551e-05 0.00% Amr::FinalizeInit() 1 3.523e-06 1.593e-05 9.378e-05 0.00% FillPatchSingleLevel 41 6.594e-05 7.239e-05 8.255e-05 0.00% Castro::construct_old_source() 50 5.901e-05 7.297e-05 8.228e-05 0.00% Castro::do_new_sources() 10 5.405e-05 5.854e-05 6.555e-05 0.00% Castro::apply_source_to_state() 20 5.073e-05 5.571e-05 5.897e-05 0.00% Castro::subcycle_advance_ctu() 10 4.667e-05 5.198e-05 5.659e-05 0.00% Castro::construct_old_gravity() 10 3.665e-05 4.153e-05 4.754e-05 0.00% Castro::advance() 10 3.899e-05 4.3e-05 4.711e-05 0.00% Amr::defBaseLevel() 1 3.218e-05 3.691e-05 4.548e-05 0.00% Castro::construct_new_gravity() 10 3.286e-05 3.702e-05 4.427e-05 0.00% Castro::check_for_nan() 20 2.401e-05 2.621e-05 2.966e-05 0.00% Castro::expand_state() 10 2.321e-05 2.547e-05 2.721e-05 0.00% Castro::post_timestep() 10 1.481e-05 1.734e-05 1.951e-05 0.00% AmrLevel::AmrLevel(dm) 1 5.548e-06 8.646e-06 1.203e-05 0.00% Castro::computeNewDt() 9 8.316e-06 9.396e-06 1.099e-05 0.00% Amr::InitializeInit() 1 2.594e-06 4.324e-06 1.041e-05 0.00% Castro::computeInitialDt() 2 5.476e-06 6.17e-06 6.82e-06 0.00% Castro::post_init() 1 2.468e-06 3.598e-06 5.951e-06 0.00% Amr::init() 1 2.094e-06 2.71e-06 3.722e-06 0.00% Amr::initialInit() 1 1.316e-06 1.785e-06 2.392e-06 0.00% Other 260 0.01176 0.01638 0.01963 0.60% ------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------- Name NCalls Incl. Min Incl. Avg Incl. Max Max % ------------------------------------------------------------------------------------------- main() 1 3.262 3.264 3.266 100.00% Amr::coarseTimeStep() 10 3.075 3.075 3.075 94.17% Amr::timeStep() 10 3.058 3.059 3.063 93.79% Castro::advance() 10 3.044 3.045 3.048 93.34% Castro::subcycle_advance_ctu() 10 2.972 2.975 2.982 91.32% Castro::do_advance_ctu() 10 2.972 2.974 2.982 91.32% Castro::construct_ctu_hydro_source() 10 2.212 2.22 2.225 68.13% Gravity::make_radial_gravity() 21 0.3065 0.3111 0.3215 9.84% AmrLevel::FillPatch() 41 0.2075 0.2229 0.2384 7.30% Gravity::get_new_grav_vector() 11 0.2048 0.2061 0.2074 6.35% Castro::construct_old_gravity() 10 0.1936 0.1965 0.2063 6.32% Gravity::get_old_grav_vector() 10 0.1928 0.1958 0.2055 6.29% FillPatchIterator::Initialize 41 0.1697 0.1873 0.2007 6.15% check_for_negative_density() 10 0.08206 0.1315 0.1874 5.74% Castro::construct_new_gravity() 10 0.1829 0.1835 0.1841 5.64% Amr::init() 1 0.176 0.1787 0.1801 5.51% Castro::initialize_do_advance() 10 0.1596 0.1663 0.1694 5.19% Amr::initialInit() 1 0.1609 0.1636 0.1649 5.05% FillPatchIterator::FillFromLevel0() 41 0.1086 0.1307 0.1446 4.43% FillPatchSingleLevel 41 0.1085 0.1306 0.1445 4.42% Amr::InitializeInit() 1 0.05756 0.09474 0.1343 4.11% Amr::defBaseLevel() 1 0.05756 0.09474 0.1342 4.11% Castro::do_old_sources() 10 0.09945 0.1083 0.1221 3.74% Castro::expand_state() 10 0.1056 0.1127 0.1165 3.57% FabArray::ParallelCopy() 41 0.07491 0.09713 0.1123 3.44% Castro::estTimeStep() 21 0.03159 0.07159 0.1121 3.43% Castro::initData() 1 0.03774 0.07435 0.1112 3.41% Amr::FinalizeInit() 1 0.02668 0.06883 0.1063 3.26% Castro::clean_state() 62 0.103 0.1044 0.1053 3.23% amrex::Copy() 193 0.07745 0.08907 0.1018 3.12% Castro::computeInitialDt() 2 0.002446 0.04462 0.08207 2.51% FabArray::setVal() 143 0.06591 0.06915 0.07583 2.32% FabArray::ParallelCopy_finish() 41 0.03565 0.05938 0.07518 2.30% Castro::initialize_advance() 10 0.06327 0.06697 0.06904 2.11% Castro::do_new_sources() 10 0.05868 0.06205 0.06652 2.04% Castro::computeTemp() 63 0.06353 0.06456 0.06571 2.01% Castro::reset_internal_energy(MultiFab) 63 0.04497 0.04591 0.04684 1.43% Castro::reset_internal_energy(Fab) 1008 0.04468 0.04565 0.04658 1.43% FabArray::ParallelCopy_nowait() 41 0.03184 0.03767 0.04036 1.24% StateDataPhysBCFunct::() 41 0.03039 0.03343 0.03587 1.10% StateData::FillBoundary(geom) 41 0.03026 0.03331 0.03576 1.10% Castro::normalize_species() 62 0.03365 0.03411 0.03533 1.08% Castro::construct_new_source() 50 0.02774 0.02922 0.03117 0.95% Gravity::interpolate_monopole_grav() 21 0.02502 0.02615 0.02792 0.85% Castro::construct_new_gravity_source() 10 0.02155 0.02292 0.02485 0.76% Castro::post_init() 1 0.02371 0.02399 0.02406 0.74% Amr::writePlotFile() 2 0.02287 0.02293 0.02307 0.71% Castro::finalize_do_advance() 10 0.01374 0.0188 0.02198 0.67% Castro::post_timestep() 10 0.01365 0.01401 0.01442 0.44% Castro::Castro() 1 0.01006 0.0113 0.01436 0.44% Castro::apply_source_to_state() 20 0.0118 0.01286 0.01368 0.42% FabArray::Saxpy() 20 0.01175 0.01281 0.01362 0.42% VisMF::Write(FabArray) 2 0.009405 0.009881 0.01245 0.38% FabArray::setDomainBndry() 41 0.009011 0.01108 0.01224 0.37% Castro::check_for_nan() 20 0.009409 0.01031 0.01116 0.34% MultiFab::contains_nan() 20 0.009385 0.01028 0.01113 0.34% Castro::initMFs() 1 0.006412 0.007695 0.01055 0.32% Castro::computeNewDt() 9 0.01011 0.01013 0.01014 0.31% Castro::construct_old_source() 50 0.008012 0.009393 0.01 0.31% Castro::construct_old_gravity_source() 10 0.007953 0.00932 0.009928 0.30% AmrLevel::AmrLevel(dm) 1 0.005324 0.00636 0.008578 0.26% StateData::define() 4 0.005318 0.006351 0.008567 0.26% Other 260 0.01581 0.02356 0.02857 0.87% ------------------------------------------------------------------------------------------- Unused ParmParse Variables: [TOP]::amr.ref_ratio(nvals = 4) :: [2, 2, 2, 2] [TOP]::amr.regrid_int(nvals = 4) :: [2, 2, 2, 2] Async Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB -------------------------------------------------------------------------------------------------------------------- Pinned Memory Usage: -------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------- The_Pinned_Arena::Initialize() 8 3 B 4 B 11 B 8192 KiB 8192 KiB 8192 KiB -------------------------------------------------------------------------------------------------------------- Cpu Memory Usage: -------------------------------------------------------------------------------------------------------------------- Name Nalloc AvgMem min AvgMem avg AvgMem max MaxMem min MaxMem avg MaxMem max -------------------------------------------------------------------------------------------------------------------- Castro::construct_ctu_hydro_source() 2880 13 MiB 13 MiB 14 MiB 24 MiB 24 MiB 24 MiB Castro::initMFs() 48 8636 KiB 8646 KiB 8653 KiB 8712 KiB 8712 KiB 8712 KiB Castro::swap_state_time_levels() 32 6725 KiB 6732 KiB 6734 KiB 7154 KiB 7154 KiB 7154 KiB StateData::define() 32 7113 KiB 7122 KiB 7125 KiB 7154 KiB 7154 KiB 7154 KiB Castro::initialize_do_advance() 80 4538 KiB 4540 KiB 4545 KiB 5000 KiB 5000 KiB 5000 KiB FillPatchIterator::Initialize 328 233 KiB 247 KiB 261 KiB 5000 KiB 5000 KiB 5000 KiB Amr::writePlotFile() 16 17 KiB 17 KiB 21 KiB 3584 KiB 3584 KiB 3584 KiB Castro::initialize_advance() 80 2790 KiB 2791 KiB 2791 KiB 3001 KiB 3001 KiB 3001 KiB Gravity::make_radial_gravity() 168 238 KiB 242 KiB 250 KiB 2560 KiB 2560 KiB 2560 KiB FabArray::ParallelCopy_nowait() 656 33 KiB 41 KiB 46 KiB 2170 KiB 2170 KiB 2170 KiB Castro::buildMetrics() 32 2022 KiB 2024 KiB 2025 KiB 2037 KiB 2037 KiB 2037 KiB Gravity::get_new_grav_vector() 88 80 KiB 80 KiB 81 KiB 1286 KiB 1286 KiB 1286 KiB Gravity::get_old_grav_vector() 80 75 KiB 76 KiB 80 KiB 1286 KiB 1286 KiB 1286 KiB -------------------------------------------------------------------------------------------------------------------- AMReX (26.04-97-gd10a21ad849d) finalized